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Protein

Uncharacterized HTH-type transcriptional regulator CBU_1416

Gene

CBU_1416

Organism
Coxiella burnetii (strain RSA 493 / Nine Mile phase I)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi19 – 38H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-binding
Biological processTranscription, Transcription regulation

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized HTH-type transcriptional regulator CBU_1416
Gene namesi
Ordered Locus Names:CBU_1416
OrganismiCoxiella burnetii (strain RSA 493 / Nine Mile phase I)
Taxonomic identifieri227377 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaLegionellalesCoxiellaceaeCoxiella
Proteomesi
  • UP000002671 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003248171 – 216Uncharacterized HTH-type transcriptional regulator CBU_1416Add BLAST216

Proteomic databases

PRIDEiQ83BT6.

Expressioni

Developmental stagei

More than twofold more abundant in the large cell variant (LCV) stage than in the small cell variant (SCV) stage (at protein level). LCVs are more metabolically active than SCVs.1 Publication

Interactioni

Protein-protein interaction databases

STRINGi227377.CBU_1416.

Structurei

3D structure databases

ProteinModelPortaliQ83BT6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini8 – 63HTH cro/C1-typePROSITE-ProRule annotationAdd BLAST56

Phylogenomic databases

eggNOGiENOG4105MEP. Bacteria.
COG1974. LUCA.
HOGENOMiHOG000026842.
OMAiNGNCTIV.

Family and domain databases

CDDicd00093. HTH_XRE. 1 hit.
InterProiView protein in InterPro
IPR001387. Cro/C1-type_HTH.
IPR010982. Lambda_DNA-bd_dom.
IPR036286. LexA/Signal_pep-like_sf.
IPR015927. Peptidase_S24_S26A/B/C.
PfamiView protein in Pfam
PF13443. HTH_26. 1 hit.
PF00717. Peptidase_S24. 1 hit.
SUPFAMiSSF47413. SSF47413. 1 hit.
SSF51306. SSF51306. 1 hit.
PROSITEiView protein in PROSITE
PS50943. HTH_CROC1. 1 hit.

Sequencei

Sequence statusi: Complete.

Q83BT6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASLSSNLKT LMTSVHINAS ELARRTGIAQ PIIHRLSTGQ NTNPKLATIK
60 70 80 90 100
PIARYFMVNI SQLIGEEPLP SDQSPQITGN YRAWNRVPLI SWKDATSWPE
110 120 130 140 150
ALPHYQTSDE VMYISTDANV SKLAYGLIIQ GCAMEPLFPN GTTIIVEPER
160 170 180 190 200
KPKDRDFVVV RLQGEPEARL RQIITEGNDR YLKSLNPELE KLEVARLAQE
210
DQFLGVMAQA KVDFLR
Length:216
Mass (Da):24,286
Last modified:June 1, 2003 - v1
Checksum:i52B33E9D4BB9C663
GO

Sequence cautioni

Q83BT6: The sequence AAO90914 differs from that shown. Reason: Erroneous initiation.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE016828 Genomic DNA. Translation: AAO90914.2. Different initiation.
RefSeqiNP_820400.2. NC_002971.3.

Genome annotation databases

EnsemblBacteriaiAAO90914; AAO90914; CBU_1416.
GeneIDi1209322.
KEGGicbu:CBU_1416.
PATRICifig|227377.7.peg.1416.

Similar proteinsi

Entry informationi

Entry nameiY1416_COXBU
AccessioniPrimary (citable) accession number: Q83BT6
Entry historyiIntegrated into UniProtKB/Swiss-Prot: March 18, 2008
Last sequence update: June 1, 2003
Last modified: October 25, 2017
This is version 83 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Coxiella burnetii
    Coxiella burnetii (strain RSA 493): entries and gene names