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Protein

Transcription antitermination protein NusB

Gene

nusB

Organism
Coxiella burnetii (strain RSA 493 / Nine Mile phase I)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRNA-binding
Biological processTranscription, Transcription antitermination, Transcription regulation

Names & Taxonomyi

Protein namesi
Recommended name:
Transcription antitermination protein NusBUniRule annotation
Alternative name(s):
Antitermination factor NusBUniRule annotation
Gene namesi
Name:nusBUniRule annotation
Ordered Locus Names:CBU_1417
OrganismiCoxiella burnetii (strain RSA 493 / Nine Mile phase I)
Taxonomic identifieri227377 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaLegionellalesCoxiellaceaeCoxiella
Proteomesi
  • UP000002671 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001765341 – 138Transcription antitermination protein NusBAdd BLAST138

Proteomic databases

PRIDEiQ83BT5.

Interactioni

Protein-protein interaction databases

STRINGi227377.CBU_1417.

Structurei

3D structure databases

ProteinModelPortaliQ83BT5.
SMRiQ83BT5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the NusB family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4107YIM. Bacteria.
COG0781. LUCA.
HOGENOMiHOG000281868.
KOiK03625.
OMAiWIGVYEF.

Family and domain databases

Gene3Di1.10.940.10. 1 hit.
HAMAPiMF_00073. NusB. 1 hit.
InterProiView protein in InterPro
IPR035926. NusB-like_sf.
IPR011605. NusB_fam.
IPR006027. NusB_RsmB_TIM44.
PANTHERiPTHR11078. PTHR11078. 1 hit.
PfamiView protein in Pfam
PF01029. NusB. 1 hit.
SUPFAMiSSF48013. SSF48013. 1 hit.
TIGRFAMsiTIGR01951. nusB. 1 hit.

Sequencei

Sequence statusi: Complete.

Q83BT5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MINKTRHNAR RYALQALYQW FFCETKPDAL ISQFMEEHDL SDTDVAYFKE
60 70 80 90 100
VVTGTIQHVA IIDELMTAHL DRKISALNPV ELSVLRLSIY ELLHRKEVPY
110 120 130
KVVIDEALEL VKEFGAEAGH KYVNAILDVL SSEIRKGV
Length:138
Mass (Da):15,873
Last modified:June 1, 2003 - v1
Checksum:i9BED0F71D8CA753D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE016828 Genomic DNA. Translation: AAO90915.1.
RefSeqiNP_820401.1. NC_002971.3.
WP_010958215.1. NZ_CCYB01000027.1.

Genome annotation databases

EnsemblBacteriaiAAO90915; AAO90915; CBU_1417.
GeneIDi1209323.
31483216.
KEGGicbu:CBU_1417.
PATRICifig|227377.7.peg.1417.

Similar proteinsi

Entry informationi

Entry nameiNUSB_COXBU
AccessioniPrimary (citable) accession number: Q83BT5
Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 15, 2003
Last sequence update: June 1, 2003
Last modified: November 22, 2017
This is version 81 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Coxiella burnetii
    Coxiella burnetii (strain RSA 493): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families