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Q83BQ8

- NUOD_COXBU

UniProt

Q83BQ8 - NUOD_COXBU

Protein

NADH-quinone oxidoreductase subunit D

Gene

nuoD

Organism
Coxiella burnetii (strain RSA 493 / Nine Mile phase I)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi
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    • History
      Entry version 84 (01 Oct 2014)
      Sequence version 1 (01 Jun 2003)
      Previous versions | rss
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    Functioni

    NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.UniRule annotation

    Catalytic activityi

    NADH + quinone = NAD+ + quinol.UniRule annotation

    GO - Molecular functioni

    1. NAD binding Source: InterPro
    2. NADH dehydrogenase (quinone) activity Source: UniProtKB-HAMAP
    3. quinone binding Source: UniProtKB-KW

    GO - Biological processi

    1. transport Source: UniProtKB-KW

    Keywords - Molecular functioni

    Oxidoreductase

    Keywords - Biological processi

    Transport

    Keywords - Ligandi

    NAD, Ubiquinone

    Enzyme and pathway databases

    BioCyciCBUR227377:GJ7S-1433-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    NADH-quinone oxidoreductase subunit DUniRule annotation (EC:1.6.99.5UniRule annotation)
    Alternative name(s):
    NADH dehydrogenase I subunit DUniRule annotation
    NDH-1 subunit DUniRule annotation
    Gene namesi
    Name:nuoDUniRule annotation
    Ordered Locus Names:CBU_1445
    OrganismiCoxiella burnetii (strain RSA 493 / Nine Mile phase I)
    Taxonomic identifieri227377 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaLegionellalesCoxiellaceaeCoxiella
    ProteomesiUP000002671: Chromosome

    Subcellular locationi

    Cell inner membrane UniRule annotation; Peripheral membrane protein UniRule annotation; Cytoplasmic side UniRule annotation

    GO - Cellular componenti

    1. plasma membrane Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cell inner membrane, Cell membrane, Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 417417NADH-quinone oxidoreductase subunit DPRO_0000371853Add
    BLAST

    Keywords - PTMi

    Quinone

    Interactioni

    Subunit structurei

    NDH-1 is composed of 14 different subunits. Subunits NuoB, C, D, E, F, and G constitute the peripheral sector of the complex.UniRule annotation

    Protein-protein interaction databases

    STRINGi227377.CBU_1445.

    Structurei

    3D structure databases

    ProteinModelPortaliQ83BQ8.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the complex I 49 kDa subunit family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0649.
    HOGENOMiHOG000228264.
    KOiK00333.
    OMAiRIIEQAC.
    OrthoDBiEOG62G5MP.

    Family and domain databases

    Gene3Di1.10.645.10. 1 hit.
    HAMAPiMF_01358. NDH1_NuoD.
    InterProiIPR001135. NADH_Q_OxRdtase_suD.
    IPR014029. NADH_UbQ_OxRdtase_49kDa_CS.
    IPR022885. NDH1_su_D/H.
    IPR029014. NiFe_Hase-like.
    [Graphical view]
    PfamiPF00346. Complex1_49kDa. 2 hits.
    [Graphical view]
    SUPFAMiSSF56762. SSF56762. 1 hit.
    TIGRFAMsiTIGR01962. NuoD. 1 hit.
    PROSITEiPS00535. COMPLEX1_49K. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q83BQ8-1 [UniParc]FASTAAdd to Basket

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    MAEVRNYTFN FGPQHPAAHG VLRLIVEVDG EVIQRIDPHI GLLHRATEKL    50
    AESKPYNQTI GYMDRLDYVS MMANEHGYVL AIEKLLGIEP PIRAKYIRTM 100
    FDEITRILNH LLWLGAHALD VGAMTVFLYC FREREDLMDC YEAVSGARMH 150
    ATYYRPGGVY RDLPDSMPKY KPSRWHNEKA VKKMNEAREG SLLDFIWDFT 200
    ARFPNLIDEY ESLLTDNRIW KQRTVGIGVV SAERALQLGF TGPMLRASGV 250
    EWDLRKKQPY AAYDRVDFDI PIGREGDCYD RYLVRIEEMR QSNRIIRQCV 300
    EWLRKNPGSV MIDDYKIVPP QREVMKRDME ALIHHFKLFT EGYIVPEGEA 350
    YAAVEQPKGE FGVYIVSDGA NKPYRVKVRA ASYPHLAAMN EMCRGHMIAD 400
    LVAIISSIDI VFGEIDR 417
    Length:417
    Mass (Da):48,119
    Last modified:June 1, 2003 - v1
    Checksum:iC917583FA3EAE98E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE016828 Genomic DNA. Translation: AAO90942.1.
    RefSeqiNP_820428.1. NC_002971.3.

    Genome annotation databases

    EnsemblBacteriaiAAO90942; AAO90942; CBU_1445.
    GeneIDi1209352.
    KEGGicbu:CBU_1445.
    PATRICi17931645. VBICoxBur82552_1445.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE016828 Genomic DNA. Translation: AAO90942.1 .
    RefSeqi NP_820428.1. NC_002971.3.

    3D structure databases

    ProteinModelPortali Q83BQ8.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 227377.CBU_1445.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAO90942 ; AAO90942 ; CBU_1445 .
    GeneIDi 1209352.
    KEGGi cbu:CBU_1445.
    PATRICi 17931645. VBICoxBur82552_1445.

    Phylogenomic databases

    eggNOGi COG0649.
    HOGENOMi HOG000228264.
    KOi K00333.
    OMAi RIIEQAC.
    OrthoDBi EOG62G5MP.

    Enzyme and pathway databases

    BioCyci CBUR227377:GJ7S-1433-MONOMER.

    Family and domain databases

    Gene3Di 1.10.645.10. 1 hit.
    HAMAPi MF_01358. NDH1_NuoD.
    InterProi IPR001135. NADH_Q_OxRdtase_suD.
    IPR014029. NADH_UbQ_OxRdtase_49kDa_CS.
    IPR022885. NDH1_su_D/H.
    IPR029014. NiFe_Hase-like.
    [Graphical view ]
    Pfami PF00346. Complex1_49kDa. 2 hits.
    [Graphical view ]
    SUPFAMi SSF56762. SSF56762. 1 hit.
    TIGRFAMsi TIGR01962. NuoD. 1 hit.
    PROSITEi PS00535. COMPLEX1_49K. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: RSA 493 / Nine Mile phase I.

    Entry informationi

    Entry nameiNUOD_COXBU
    AccessioniPrimary (citable) accession number: Q83BQ8
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: May 5, 2009
    Last sequence update: June 1, 2003
    Last modified: October 1, 2014
    This is version 84 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Coxiella burnetii
      Coxiella burnetii (strain RSA 493): entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3