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Protein
Submitted name:

Virulence-associated protein I

Gene

higA

Organism
Coxiella burnetii (strain RSA 493 / Nine Mile phase I)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  • sequence-specific DNA binding Source: InterPro
  • toxic substance binding Source: TIGR

GO - Biological processi

  • plasmid maintenance Source: TIGR
  • response to toxic substance Source: TIGR
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Virulence-associated protein IImported
Gene namesi
Name:higAImported
Ordered Locus Names:CBU_1490Imported
OrganismiCoxiella burnetii (strain RSA 493 / Nine Mile phase I)Imported
Taxonomic identifieri227377 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaLegionellalesCoxiellaceaeCoxiella
Proteomesi
  • UP000002671 Componenti: Chromosome

PTM / Processingi

Proteomic databases

PRIDEiQ83BL4.

Interactioni

Protein-protein interaction databases

STRINGi227377.CBU_1490.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3TRBX-ray2.00A/B3-103[»]
ProteinModelPortaliQ83BL4.
SMRiQ83BL4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini17 – 72HTH cro/C1-type DNA-bindingInterPro annotationAdd BLAST56

Phylogenomic databases

eggNOGiENOG4105VDM. Bacteria.
COG3093. LUCA.
HOGENOMiHOG000265973.
OMAiKFWLGIQ.

Family and domain databases

Gene3Di1.10.260.40. 1 hit.
InterProiIPR001387. Cro/C1-type_HTH.
IPR010982. Lambda_DNA-bd_dom.
IPR013430. Toxin_antidote_HigA.
[Graphical view]
PfamiPF01381. HTH_3. 1 hit.
[Graphical view]
SMARTiSM00530. HTH_XRE. 1 hit.
[Graphical view]
SUPFAMiSSF47413. SSF47413. 1 hit.
TIGRFAMsiTIGR02607. antidote_HigA. 1 hit.
PROSITEiPS50943. HTH_CROC1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q83BL4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKMAANRMRP IHPGEILAEE LGFLDKMSAN QLAKHLAIPT NRVTAILNGA
60 70 80 90 100
RSITADTALR LAKFFGTTPE FWLNLQDAYD IKMALKKSGK KIEKEVTPYD

QAA
Length:103
Mass (Da):11,458
Last modified:November 4, 2008 - v2
Checksum:iA2BEA9C6E8B013F8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE016828 Genomic DNA. Translation: AAO90987.2.
RefSeqiNP_820473.2. NC_002971.3.
WP_010958263.1. NZ_CDBG01000001.1.

Genome annotation databases

EnsemblBacteriaiAAO90987; AAO90987; CBU_1490.
GeneIDi1209400.
KEGGicbu:CBU_1490.
PATRICi17931743. VBICoxBur82552_1491.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE016828 Genomic DNA. Translation: AAO90987.2.
RefSeqiNP_820473.2. NC_002971.3.
WP_010958263.1. NZ_CDBG01000001.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3TRBX-ray2.00A/B3-103[»]
ProteinModelPortaliQ83BL4.
SMRiQ83BL4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi227377.CBU_1490.

Proteomic databases

PRIDEiQ83BL4.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAO90987; AAO90987; CBU_1490.
GeneIDi1209400.
KEGGicbu:CBU_1490.
PATRICi17931743. VBICoxBur82552_1491.

Phylogenomic databases

eggNOGiENOG4105VDM. Bacteria.
COG3093. LUCA.
HOGENOMiHOG000265973.
OMAiKFWLGIQ.

Family and domain databases

Gene3Di1.10.260.40. 1 hit.
InterProiIPR001387. Cro/C1-type_HTH.
IPR010982. Lambda_DNA-bd_dom.
IPR013430. Toxin_antidote_HigA.
[Graphical view]
PfamiPF01381. HTH_3. 1 hit.
[Graphical view]
SMARTiSM00530. HTH_XRE. 1 hit.
[Graphical view]
SUPFAMiSSF47413. SSF47413. 1 hit.
TIGRFAMsiTIGR02607. antidote_HigA. 1 hit.
PROSITEiPS50943. HTH_CROC1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ83BL4_COXBU
AccessioniPrimary (citable) accession number: Q83BL4
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: November 4, 2008
Last modified: November 2, 2016
This is version 82 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.