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Q83BB0 (RIMK_COXBU) Reviewed, UniProtKB/Swiss-Prot

Last modified March 19, 2014. Version 67. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Probable alpha-L-glutamate ligase

EC=6.3.2.-
Gene names
Name:rimK
Ordered Locus Names:CBU_1602
OrganismCoxiella burnetii (strain RSA 493 / Nine Mile phase I) [Reference proteome] [HAMAP]
Taxonomic identifier227377 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaLegionellalesCoxiellaceaeCoxiella

Protein attributes

Sequence length301 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Binds 2 magnesium or manganese ions per subunit By similarity.

Sequence similarities

Belongs to the RimK family.

Contains 1 ATP-grasp domain.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 301301Probable alpha-L-glutamate ligase HAMAP-Rule MF_01552
PRO_0000205452

Regions

Domain104 – 287184ATP-grasp
Nucleotide binding178 – 1792ATP By similarity
Nucleotide binding211 – 2133ATP By similarity

Sites

Metal binding2481Magnesium or manganese 1 By similarity
Metal binding2601Magnesium or manganese 1 By similarity
Metal binding2601Magnesium or manganese 2 By similarity
Metal binding2621Magnesium or manganese 2 By similarity
Binding site1411ATP By similarity
Binding site1871ATP By similarity

Sequences

Sequence LengthMass (Da)Tools
Q83BB0 [UniParc].

Last modified June 1, 2003. Version 1.
Checksum: 3D2FFF25F2877511

FASTA30133,192
        10         20         30         40         50         60 
MKIAILSTKQ ELSSTQRLKE AALARGHKVK IINTLRCYMS LSQEKPTIHY MGKELARYDA 

        70         80         90        100        110        120 
VIPRIGASIT FYGTAVVRQF EMMGTFCLNS SMSITRSRDK FRSLQFLSRK GIDLPITGFA 

       130        140        150        160        170        180 
HSPDDIEDLI QMVGGTPLII KLIEGTQGIG VVLAETKKAA ESVIQAFLGL KVNILIQEFI 

       190        200        210        220        230        240 
GETQGRDIRC FVIGNKVVAT MQREARPGDF RSNVHRGGTT KLIKITPQER EISINAAKAL 

       250        260        270        280        290        300 
GLNVAGVDLL RSKRGPLVLE VNSSPGLEGI ENITKKDIAG MIIEFIEKNA KPIKAYSRYQ 


G 

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE016828 Genomic DNA. Translation: AAO91099.1.
RefSeqNP_820585.1. NC_002971.3.

3D structure databases

ProteinModelPortalQ83BB0.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING227377.CBU_1602.

Proteomic databases

PRIDEQ83BB0.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAO91099; AAO91099; CBU_1602.
GeneID1209513.
KEGGcbu:CBU_1602.
PATRIC17931967. VBICoxBur82552_1602.

Phylogenomic databases

eggNOGCOG0189.
HOGENOMHOG000293092.
KOK05844.
OMACREPRLY.
OrthoDBEOG6DZDX8.
ProtClustDBCLSK914896.

Enzyme and pathway databases

BioCycCBUR227377:GJ7S-1581-MONOMER.

Family and domain databases

Gene3D3.30.1490.20. 1 hit.
3.30.470.20. 1 hit.
3.40.50.20. 1 hit.
HAMAPMF_01552. RimK.
InterProIPR011761. ATP-grasp.
IPR013651. ATP-grasp_RimK-type.
IPR013815. ATP_grasp_subdomain_1.
IPR013816. ATP_grasp_subdomain_2.
IPR016185. PreATP-grasp_dom.
IPR023533. Ribosomal_S6_modifier_RimK.
IPR004666. RpS6_RimK/Lys_biosynth_LsyX.
[Graphical view]
PfamPF08443. RimK. 1 hit.
[Graphical view]
TIGRFAMsTIGR00768. rimK_fam. 1 hit.
PROSITEPS50975. ATP_GRASP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRIMK_COXBU
AccessionPrimary (citable) accession number: Q83BB0
Entry history
Integrated into UniProtKB/Swiss-Prot: December 20, 2005
Last sequence update: June 1, 2003
Last modified: March 19, 2014
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Coxiella burnetii

Coxiella burnetii (strain RSA 493): entries and gene names