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Q83AX8

- RL13_COXBU

UniProt

Q83AX8 - RL13_COXBU

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Protein
50S ribosomal protein L13
Gene
rplM, CBU_1749
Organism
Coxiella burnetii (strain RSA 493 / Nine Mile phase I)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly By similarity.UniRule annotation

GO - Molecular functioni

  1. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciCBUR227377:GJ7S-1723-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L13
Gene namesi
Name:rplM
Ordered Locus Names:CBU_1749
OrganismiCoxiella burnetii (strain RSA 493 / Nine Mile phase I)
Taxonomic identifieri227377 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaLegionellalesCoxiellaceaeCoxiella
ProteomesiUP000002671: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 14214250S ribosomal protein L13UniRule annotation
PRO_1000067991Add
BLAST

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit By similarity.UniRule annotation

Protein-protein interaction databases

STRINGi227377.CBU_1749.

Structurei

3D structure databases

ProteinModelPortaliQ83AX8.
SMRiQ83AX8. Positions 1-138.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0102.
HOGENOMiHOG000225286.
KOiK02871.
OMAiGIKETNF.
OrthoDBiEOG628FBD.

Family and domain databases

Gene3Di3.90.1180.10. 1 hit.
HAMAPiMF_01366. Ribosomal_L13.
InterProiIPR005822. Ribosomal_L13.
IPR005823. Ribosomal_L13_bac-type.
IPR023563. Ribosomal_L13_CS.
IPR023564. Ribosomal_L13_dom.
[Graphical view]
PANTHERiPTHR11545. PTHR11545. 1 hit.
PfamiPF00572. Ribosomal_L13. 1 hit.
[Graphical view]
PIRSFiPIRSF002181. Ribosomal_L13. 1 hit.
SUPFAMiSSF52161. SSF52161. 1 hit.
TIGRFAMsiTIGR01066. rplM_bact. 1 hit.
PROSITEiPS00783. RIBOSOMAL_L13. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q83AX8-1 [UniParc]FASTAAdd to Basket

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MATYMANAKT VSPRWLLVNA EGKTLGRLAS RIAAILRGKH KAEFTPHVDA    50
GDFVVVINVD KLKVTGNKTQ DKQYHHHSGY PGGLKTINFA DLQAKKPQRI 100
LELAIKGMLP KGPLGRQLYR KLKIYAGDQH PHQAQQPELI DL 142
Length:142
Mass (Da):15,811
Last modified:June 1, 2003 - v1
Checksum:i25C642F9654F8934
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE016828 Genomic DNA. Translation: AAO91243.1.
RefSeqiNP_820729.1. NC_002971.3.

Genome annotation databases

EnsemblBacteriaiAAO91243; AAO91243; CBU_1749.
GeneIDi1209660.
KEGGicbu:CBU_1749.
PATRICi17932239. VBICoxBur82552_1738.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE016828 Genomic DNA. Translation: AAO91243.1 .
RefSeqi NP_820729.1. NC_002971.3.

3D structure databases

ProteinModelPortali Q83AX8.
SMRi Q83AX8. Positions 1-138.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 227377.CBU_1749.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAO91243 ; AAO91243 ; CBU_1749 .
GeneIDi 1209660.
KEGGi cbu:CBU_1749.
PATRICi 17932239. VBICoxBur82552_1738.

Phylogenomic databases

eggNOGi COG0102.
HOGENOMi HOG000225286.
KOi K02871.
OMAi GIKETNF.
OrthoDBi EOG628FBD.

Enzyme and pathway databases

BioCyci CBUR227377:GJ7S-1723-MONOMER.

Family and domain databases

Gene3Di 3.90.1180.10. 1 hit.
HAMAPi MF_01366. Ribosomal_L13.
InterProi IPR005822. Ribosomal_L13.
IPR005823. Ribosomal_L13_bac-type.
IPR023563. Ribosomal_L13_CS.
IPR023564. Ribosomal_L13_dom.
[Graphical view ]
PANTHERi PTHR11545. PTHR11545. 1 hit.
Pfami PF00572. Ribosomal_L13. 1 hit.
[Graphical view ]
PIRSFi PIRSF002181. Ribosomal_L13. 1 hit.
SUPFAMi SSF52161. SSF52161. 1 hit.
TIGRFAMsi TIGR01066. rplM_bact. 1 hit.
PROSITEi PS00783. RIBOSOMAL_L13. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: RSA 493 / Nine Mile phase I.

Entry informationi

Entry nameiRL13_COXBU
AccessioniPrimary (citable) accession number: Q83AX8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 5, 2008
Last sequence update: June 1, 2003
Last modified: May 14, 2014
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Coxiella burnetii
    Coxiella burnetii (strain RSA 493): entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3