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Q83AF8

- ATPD_COXBU

UniProt

Q83AF8 - ATPD_COXBU

Protein

ATP synthase subunit delta

Gene

atpH

Organism
Coxiella burnetii (strain RSA 493 / Nine Mile phase I)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 67 (01 Oct 2014)
      Sequence version 1 (01 Jun 2003)
      Previous versions | rss
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    Functioni

    F1F0 ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F1 containing the extramembraneous catalytic core and F0 containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F1 is coupled via a rotary mechanism of the central stalk subunits to proton translocation.UniRule annotation
    This protein is part of the stalk that links CF0 to CF1. It either transmits conformational changes from CF0 to CF1 or is implicated in proton conduction.UniRule annotation

    GO - Molecular functioni

    1. proton-transporting ATP synthase activity, rotational mechanism Source: UniProtKB-HAMAP

    GO - Biological processi

    1. plasma membrane ATP synthesis coupled proton transport Source: UniProtKB-HAMAP

    Keywords - Biological processi

    ATP synthesis, Hydrogen ion transport, Ion transport, Transport

    Enzyme and pathway databases

    BioCyciCBUR227377:GJ7S-1916-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    ATP synthase subunit deltaUniRule annotation
    Alternative name(s):
    ATP synthase F(1) sector subunit deltaUniRule annotation
    F-type ATPase subunit deltaUniRule annotation
    Short name:
    F-ATPase subunit deltaUniRule annotation
    Gene namesi
    Name:atpHUniRule annotation
    Ordered Locus Names:CBU_1942
    OrganismiCoxiella burnetii (strain RSA 493 / Nine Mile phase I)
    Taxonomic identifieri227377 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaLegionellalesCoxiellaceaeCoxiella
    ProteomesiUP000002671: Chromosome

    Subcellular locationi

    Cell inner membrane UniRule annotation; Peripheral membrane protein UniRule annotation

    GO - Cellular componenti

    1. plasma membrane Source: UniProtKB-SubCell
    2. proton-transporting ATP synthase complex, catalytic core F(1) Source: UniProtKB-KW

    Keywords - Cellular componenti

    Cell inner membrane, Cell membrane, CF(1), Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 185185ATP synthase subunit deltaPRO_1000184686Add
    BLAST

    Interactioni

    Subunit structurei

    F-type ATPases have 2 components, F1 - the catalytic core - and F0 - the membrane proton channel. F1 has five subunits: alpha3, beta3, gamma1, delta1, epsilon1. F0 has three main subunits: a1, b2 and c(10-14). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. F1 is attached to F0 by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains.UniRule annotation

    Protein-protein interaction databases

    STRINGi227377.CBU_1942.

    Structurei

    3D structure databases

    ProteinModelPortaliQ83AF8.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ATPase delta chain family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0712.
    HOGENOMiHOG000075824.
    KOiK02113.
    OMAiCGEQINE.
    OrthoDBiEOG6DNTDK.

    Family and domain databases

    Gene3Di1.10.520.20. 1 hit.
    HAMAPiMF_01416. ATP_synth_delta_bact.
    InterProiIPR026015. ATPase_OSCP/delta_N.
    IPR000711. ATPase_OSCP/dsu.
    [Graphical view]
    PANTHERiPTHR11910. PTHR11910. 1 hit.
    PfamiPF00213. OSCP. 1 hit.
    [Graphical view]
    PRINTSiPR00125. ATPASEDELTA.
    SUPFAMiSSF47928. SSF47928. 1 hit.
    TIGRFAMsiTIGR01145. ATP_synt_delta. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q83AF8-1 [UniParc]FASTAAdd to Basket

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    MALHLTLARP YAKAAFADGQ KANQLEAWLA VFTAFSKIIK NKEVARQIIN    50
    PKFSDKEIKT LLFDLIQTIE PESTKQLKDK IDHFLQLLID EKRLMILPDI 100
    ALVYQQLLNK YQGIIEASVT YVFPLNDEHR QQIQKQLEKR FNAEVKLKMI 150
    KDESLLGGVI IRAGNWVMDG SIKGKLTRLA ENLKG 185
    Length:185
    Mass (Da):21,189
    Last modified:June 1, 2003 - v1
    Checksum:iE421BF892526E3FB
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE016828 Genomic DNA. Translation: AAO91432.1.
    RefSeqiNP_820918.1. NC_002971.3.

    Genome annotation databases

    EnsemblBacteriaiAAO91432; AAO91432; CBU_1942.
    GeneIDi1209855.
    KEGGicbu:CBU_1942.
    PATRICi17932623. VBICoxBur82552_1928.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE016828 Genomic DNA. Translation: AAO91432.1 .
    RefSeqi NP_820918.1. NC_002971.3.

    3D structure databases

    ProteinModelPortali Q83AF8.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 227377.CBU_1942.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAO91432 ; AAO91432 ; CBU_1942 .
    GeneIDi 1209855.
    KEGGi cbu:CBU_1942.
    PATRICi 17932623. VBICoxBur82552_1928.

    Phylogenomic databases

    eggNOGi COG0712.
    HOGENOMi HOG000075824.
    KOi K02113.
    OMAi CGEQINE.
    OrthoDBi EOG6DNTDK.

    Enzyme and pathway databases

    BioCyci CBUR227377:GJ7S-1916-MONOMER.

    Family and domain databases

    Gene3Di 1.10.520.20. 1 hit.
    HAMAPi MF_01416. ATP_synth_delta_bact.
    InterProi IPR026015. ATPase_OSCP/delta_N.
    IPR000711. ATPase_OSCP/dsu.
    [Graphical view ]
    PANTHERi PTHR11910. PTHR11910. 1 hit.
    Pfami PF00213. OSCP. 1 hit.
    [Graphical view ]
    PRINTSi PR00125. ATPASEDELTA.
    SUPFAMi SSF47928. SSF47928. 1 hit.
    TIGRFAMsi TIGR01145. ATP_synt_delta. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: RSA 493 / Nine Mile phase I.

    Entry informationi

    Entry nameiATPD_COXBU
    AccessioniPrimary (citable) accession number: Q83AF8
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 28, 2009
    Last sequence update: June 1, 2003
    Last modified: October 1, 2014
    This is version 67 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Coxiella burnetii
      Coxiella burnetii (strain RSA 493): entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3