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Q83AC6 (LPTD_COXBU) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 61. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
LPS-assembly protein LptD
Gene names
Name:lptD
Synonyms:imp, ostA
Ordered Locus Names:CBU_1978
OrganismCoxiella burnetii (strain RSA 493 / Nine Mile phase I) [Reference proteome] [HAMAP]
Taxonomic identifier227377 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaLegionellalesCoxiellaceaeCoxiella

Protein attributes

Sequence length870 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Function

Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane By similarity. HAMAP-Rule MF_01411

Subunit structure

Component of the lipopolysaccharide transport and assembly complex. Interacts with LptE and LptA By similarity.

Subcellular location

Cell outer membrane By similarity HAMAP-Rule MF_01411.

Sequence similarities

Belongs to the LptD family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2525 Potential
Chain26 – 870845LPS-assembly protein LptD HAMAP-Rule MF_01411
PRO_0000281600

Sequences

Sequence LengthMass (Da)Tools
Q83AC6 [UniParc].

Last modified June 1, 2003. Version 1.
Checksum: 2FD4AC39F0C2DAF8

FASTA87099,077
        10         20         30         40         50         60 
MKQGKSFIFY CLVLLLCGFQ QLSSAVTASI AKAIKTTDRK QRVSETLPTG LSYRRFYQHI 

        70         80         90        100        110        120 
AHLLGWVPAP DLVCRGYFKE PLILTEHPHP GPATKEPAIV TAKGPSMVTA QGVSILRKDV 

       130        140        150        160        170        180 
VVTQPGRIVE ADKAYIYRDS KTGHVTKIIL IGHVRLHEAD KRIVADKGTL TLYPKTAILM 

       190        200        210        220        230        240 
NAAYHIYNGE PYFYKFKYPF DAWGIAKHAV RDASNVITLR HATYSTCKPT APAWSMSATT 

       250        260        270        280        290        300 
LVLNRNTHRG EAYNMLLHIG RVPIFYFPYF NFPIDNYRKT GFLIPYAGHS SSSGWFFALP 

       310        320        330        340        350        360 
FYWNMAPNYD LTLTPEFMSE RGLNLQSLFR FLSTKSSGTI YLNYLPNDKV FQQFRETTLS 

       370        380        390        400        410        420 
KFPPSVLAEH PVFIPYVDKL KKMKNQRAFF SMNETTLFNS EWSSRVILNY VTDPYFFQDL 

       430        440        450        460        470        480 
GGQLGGSSLA NQLLNQIDLQ YNGLHWQFMG MLQAYQTLHL ISQWTTPALD QYSRLPDFNI 

       490        500        510        520        530        540 
VGYYPDIARH VDFNFNAEAV NFDYRSDFVP DKPRGQRFHM RPGISFPFYF ASGYIIPQLW 

       550        560        570        580        590        600 
ADATAYNITH FQPGQAHTSS RLLPIFDIDS GLYFDRNFHL GHRSFIQTLE PRFFYLYVPY 

       610        620        630        640        650        660 
QNQDRFPNFD TVLLPFSFEQ LFALNQFTGN DRLQNANQAS FALTSRVLDA QNGSPILTAN 

       670        680        690        700        710        720 
VGFIYYLENQ RVCLTPGCTP SNYHYSPIIG ELTFYPFPYW SFTGSLAWDP NLGQTNNTSV 

       730        740        750        760        770        780 
ELAYNNGGKK ADIRYLFVHG NEDSIVTPTT LIVPGNAYSQ NTNHVISSGA WPLLKKWNAV 

       790        800        810        820        830        840 
GYWDYNITER RTDVYSIGVQ YNTCCWALSF SIRRTYAGLK VDPNGALQRQ YDTAYGFELQ 

       850        860        870 
LKGLGNLGTA PISTVTVLDA MNNGVSNDVR 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE016828 Genomic DNA. Translation: AAO91467.1.
RefSeqNP_820953.1. NC_002971.3.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING227377.CBU_1978.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAO91467; AAO91467; CBU_1978.
GeneID1209891.
KEGGcbu:CBU_1978.
PATRIC17932699. VBICoxBur82552_1966.

Phylogenomic databases

eggNOGCOG1452.
HOGENOMHOG000027335.
KOK04744.
OMADYSHLDW.
OrthoDBEOG6SZ1CP.

Enzyme and pathway databases

BioCycCBUR227377:GJ7S-1952-MONOMER.

Family and domain databases

HAMAPMF_01411. LPS_assembly_LptD.
InterProIPR020889. LipoPS_assembly_LptD.
IPR007543. OstA_C.
[Graphical view]
PfamPF04453. OstA_C. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameLPTD_COXBU
AccessionPrimary (citable) accession number: Q83AC6
Entry history
Integrated into UniProtKB/Swiss-Prot: March 20, 2007
Last sequence update: June 1, 2003
Last modified: May 14, 2014
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Coxiella burnetii

Coxiella burnetii (strain RSA 493): entries and gene names