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Q83AC6

- LPTD_COXBU

UniProt

Q83AC6 - LPTD_COXBU

Protein

LPS-assembly protein LptD

Gene

lptD

Organism
Coxiella burnetii (strain RSA 493 / Nine Mile phase I)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 62 (01 Oct 2014)
      Sequence version 1 (01 Jun 2003)
      Previous versions | rss
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    Functioni

    Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.UniRule annotation

    GO - Biological processi

    1. Gram-negative-bacterium-type cell outer membrane assembly Source: UniProtKB-HAMAP
    2. lipopolysaccharide transport Source: InterPro
    3. response to organic substance Source: InterPro

    Enzyme and pathway databases

    BioCyciCBUR227377:GJ7S-1952-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    LPS-assembly protein LptDUniRule annotation
    Gene namesi
    Name:lptDUniRule annotation
    Synonyms:imp, ostA
    Ordered Locus Names:CBU_1978
    OrganismiCoxiella burnetii (strain RSA 493 / Nine Mile phase I)
    Taxonomic identifieri227377 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaLegionellalesCoxiellaceaeCoxiella
    ProteomesiUP000002671: Chromosome

    Subcellular locationi

    Cell outer membrane UniRule annotation

    GO - Cellular componenti

    1. cell outer membrane Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cell outer membrane, Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2525UniRule annotationAdd
    BLAST
    Chaini26 – 870845LPS-assembly protein LptDPRO_0000281600Add
    BLAST

    Interactioni

    Subunit structurei

    Component of the lipopolysaccharide transport and assembly complex. Interacts with LptE and LptA.UniRule annotation

    Protein-protein interaction databases

    STRINGi227377.CBU_1978.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the LptD family.UniRule annotation

    Keywords - Domaini

    Signal

    Phylogenomic databases

    eggNOGiCOG1452.
    HOGENOMiHOG000027335.
    KOiK04744.
    OMAiDYSHLDW.
    OrthoDBiEOG6SZ1CP.

    Family and domain databases

    HAMAPiMF_01411. LPS_assembly_LptD.
    InterProiIPR020889. LipoPS_assembly_LptD.
    IPR007543. OstA_C.
    [Graphical view]
    PfamiPF04453. OstA_C. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q83AC6-1 [UniParc]FASTAAdd to Basket

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    MKQGKSFIFY CLVLLLCGFQ QLSSAVTASI AKAIKTTDRK QRVSETLPTG    50
    LSYRRFYQHI AHLLGWVPAP DLVCRGYFKE PLILTEHPHP GPATKEPAIV 100
    TAKGPSMVTA QGVSILRKDV VVTQPGRIVE ADKAYIYRDS KTGHVTKIIL 150
    IGHVRLHEAD KRIVADKGTL TLYPKTAILM NAAYHIYNGE PYFYKFKYPF 200
    DAWGIAKHAV RDASNVITLR HATYSTCKPT APAWSMSATT LVLNRNTHRG 250
    EAYNMLLHIG RVPIFYFPYF NFPIDNYRKT GFLIPYAGHS SSSGWFFALP 300
    FYWNMAPNYD LTLTPEFMSE RGLNLQSLFR FLSTKSSGTI YLNYLPNDKV 350
    FQQFRETTLS KFPPSVLAEH PVFIPYVDKL KKMKNQRAFF SMNETTLFNS 400
    EWSSRVILNY VTDPYFFQDL GGQLGGSSLA NQLLNQIDLQ YNGLHWQFMG 450
    MLQAYQTLHL ISQWTTPALD QYSRLPDFNI VGYYPDIARH VDFNFNAEAV 500
    NFDYRSDFVP DKPRGQRFHM RPGISFPFYF ASGYIIPQLW ADATAYNITH 550
    FQPGQAHTSS RLLPIFDIDS GLYFDRNFHL GHRSFIQTLE PRFFYLYVPY 600
    QNQDRFPNFD TVLLPFSFEQ LFALNQFTGN DRLQNANQAS FALTSRVLDA 650
    QNGSPILTAN VGFIYYLENQ RVCLTPGCTP SNYHYSPIIG ELTFYPFPYW 700
    SFTGSLAWDP NLGQTNNTSV ELAYNNGGKK ADIRYLFVHG NEDSIVTPTT 750
    LIVPGNAYSQ NTNHVISSGA WPLLKKWNAV GYWDYNITER RTDVYSIGVQ 800
    YNTCCWALSF SIRRTYAGLK VDPNGALQRQ YDTAYGFELQ LKGLGNLGTA 850
    PISTVTVLDA MNNGVSNDVR 870
    Length:870
    Mass (Da):99,077
    Last modified:June 1, 2003 - v1
    Checksum:i2FD4AC39F0C2DAF8
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE016828 Genomic DNA. Translation: AAO91467.1.
    RefSeqiNP_820953.1. NC_002971.3.

    Genome annotation databases

    EnsemblBacteriaiAAO91467; AAO91467; CBU_1978.
    GeneIDi1209891.
    KEGGicbu:CBU_1978.
    PATRICi17932699. VBICoxBur82552_1966.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE016828 Genomic DNA. Translation: AAO91467.1 .
    RefSeqi NP_820953.1. NC_002971.3.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 227377.CBU_1978.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAO91467 ; AAO91467 ; CBU_1978 .
    GeneIDi 1209891.
    KEGGi cbu:CBU_1978.
    PATRICi 17932699. VBICoxBur82552_1966.

    Phylogenomic databases

    eggNOGi COG1452.
    HOGENOMi HOG000027335.
    KOi K04744.
    OMAi DYSHLDW.
    OrthoDBi EOG6SZ1CP.

    Enzyme and pathway databases

    BioCyci CBUR227377:GJ7S-1952-MONOMER.

    Family and domain databases

    HAMAPi MF_01411. LPS_assembly_LptD.
    InterProi IPR020889. LipoPS_assembly_LptD.
    IPR007543. OstA_C.
    [Graphical view ]
    Pfami PF04453. OstA_C. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: RSA 493 / Nine Mile phase I.

    Entry informationi

    Entry nameiLPTD_COXBU
    AccessioniPrimary (citable) accession number: Q83AC6
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: March 20, 2007
    Last sequence update: June 1, 2003
    Last modified: October 1, 2014
    This is version 62 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Coxiella burnetii
      Coxiella burnetii (strain RSA 493): entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3