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Protein

Putative pre-16S rRNA nuclease

Gene

CBU_2094

Organism
Coxiella burnetii (strain RSA 493 / Nine Mile phase I)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionHydrolase, Nuclease
Biological processRibosome biogenesis

Names & Taxonomyi

Protein namesi
Recommended name:
Putative pre-16S rRNA nuclease (EC:3.1.-.-)
Gene namesi
Ordered Locus Names:CBU_2094
OrganismiCoxiella burnetii (strain RSA 493 / Nine Mile phase I)
Taxonomic identifieri227377 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaLegionellalesCoxiellaceaeCoxiella
Proteomesi
  • UP000002671 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm

GO - Cellular componenti

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001720551 – 141Putative pre-16S rRNA nucleaseAdd BLAST141

Proteomic databases

PRIDEiQ83A17.

Interactioni

Protein-protein interaction databases

STRINGi227377.CBU_2094.

Structurei

3D structure databases

ProteinModelPortaliQ83A17.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the YqgF nuclease family.

Phylogenomic databases

eggNOGiENOG4107Y66. Bacteria.
COG0816. LUCA.
HOGENOMiHOG000016954.
KOiK07447.
OMAiARRFGNQ.

Family and domain databases

Gene3Di3.30.420.140. 1 hit.
HAMAPiMF_00651. Nuclease_YqgF. 1 hit.
InterProiView protein in InterPro
IPR012337. RNaseH-like_sf.
IPR005227. YqgF.
IPR006641. YqgF/RNaseH-like_dom.
IPR037027. YqgF/RNaseH-like_dom_sf.
PANTHERiPTHR33317. PTHR33317. 1 hit.
PfamiView protein in Pfam
PF03652. RuvX. 1 hit.
SMARTiView protein in SMART
SM00732. YqgFc. 1 hit.
SUPFAMiSSF53098. SSF53098. 1 hit.
TIGRFAMsiTIGR00250. RNAse_H_YqgF. 1 hit.

Sequencei

Sequence statusi: Complete.

Q83A17-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPNQNLIALG FDFGMKRIGV AVGQTVTHSA NAIAILKAQD GVPDWEKIKM
60 70 80 90 100
LIETWHANVL VVGIPYNMDG SEQTLTFAAR KFARKLQMRF GLPVSMVDER
110 120 130 140
LTTIEAKRQW YEQGLTKRPQ HLDNYAAKLI LEQWLQEQKN E
Length:141
Mass (Da):16,111
Last modified:December 16, 2008 - v2
Checksum:iF693257B63831CEA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE016828 Genomic DNA. Translation: AAO91578.2.
RefSeqiNP_821064.2. NC_002971.3.
WP_010958649.1. NC_002971.4.

Genome annotation databases

EnsemblBacteriaiAAO91578; AAO91578; CBU_2094.
GeneIDi1210007.
KEGGicbu:CBU_2094.
PATRICifig|227377.7.peg.2085.

Similar proteinsi

Entry informationi

Entry nameiYQGF_COXBU
AccessioniPrimary (citable) accession number: Q83A17
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 26, 2005
Last sequence update: December 16, 2008
Last modified: October 25, 2017
This is version 87 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Coxiella burnetii
    Coxiella burnetii (strain RSA 493): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families