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Protein
Submitted name:

Capsid protein

Gene
N/A
Organism
Olive latent virus 1
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
Capsid proteinImported
OrganismiOlive latent virus 1Imported
Taxonomic identifieri47669 [NCBI]
Taxonomic lineageiVirusesssRNA virusesssRNA positive-strand viruses, no DNA stageTombusviridaeAlphanecrovirus
Proteomesi
  • UP000202795 Componenti: Genome

Subcellular locationi

GO - Cellular componenti

Structurei

3D structure databases

ProteinModelPortaliQ83942
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini57 – 265ICOSAH_VIR_COAT_SInterPro annotationAdd BLAST209

Family and domain databases

Gene3Di2.60.120.20, 1 hit
InterProiView protein in InterPro
IPR000937 Capsid_prot_S-dom_vir
IPR029053 Viral_coat
PfamiView protein in Pfam
PF00729 Viral_coat, 1 hit
PRINTSiPR00233 ICOSAHEDRAL

Sequencei

Sequence statusi: Complete.

Q83942-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVNFYWDSRI QRWFYESGPQ RVRTYIKRIS PHQMASLPAR KTKRSPPNRG
60 70 80 90 100
NLQVLPVIAP VAGGVISTEG HVPRITTTNE QTVVRNTEII SAINSAALGA
110 120 130 140 150
IFGNYVTVIP SNLSWLAGLS DLYSKYRWRK LRFIYLPVCP TSTQGNVSMS
160 170 180 190 200
LSFDRIDTQP TSITQMQQGY RAITFPPYAG YDGAMALASF GNIPGMVVVD
210 220 230 240 250
VDCARMDKLW YPNVTLATFL AMAPTSRTDT CGVTLFTASD QGPAAATNFG
260 270
QVFCQYEIEF IEPVNPTVNL
Length:270
Mass (Da):29,937
Last modified:November 1, 1996 - v1
Checksum:i2263757A5DC735BD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X85989 Genomic RNA Translation: CAA59981.1
RefSeqiNP_043911.1, NC_001721.1

Genome annotation databases

GeneIDi1440673
KEGGivg:1440673

Similar proteinsi

Entry informationi

Entry nameiQ83942_9TOMB
AccessioniPrimary (citable) accession number: Q83942
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: March 28, 2018
This is version 49 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health