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Q83942 (Q83942_9TOMB) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
OrganismOlive latent virus 1 EMBL CAA59981.1
Taxonomic identifier47669 [NCBI]
Taxonomic lineageVirusesssRNA positive-strand viruses, no DNA stageTombusviridaeAlphanecrovirus

Protein attributes

Sequence length270 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Gene Ontology (GO)
   Cellular_componentviral capsid

Inferred from electronic annotation. Source: InterPro

   Molecular_functionstructural molecule activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q83942 [UniParc].

Last modified November 1, 1996. Version 1.
Checksum: 2263757A5DC735BD

FASTA27029,937
        10         20         30         40         50         60 
MVNFYWDSRI QRWFYESGPQ RVRTYIKRIS PHQMASLPAR KTKRSPPNRG NLQVLPVIAP 

        70         80         90        100        110        120 
VAGGVISTEG HVPRITTTNE QTVVRNTEII SAINSAALGA IFGNYVTVIP SNLSWLAGLS 

       130        140        150        160        170        180 
DLYSKYRWRK LRFIYLPVCP TSTQGNVSMS LSFDRIDTQP TSITQMQQGY RAITFPPYAG 

       190        200        210        220        230        240 
YDGAMALASF GNIPGMVVVD VDCARMDKLW YPNVTLATFL AMAPTSRTDT CGVTLFTASD 

       250        260        270 
QGPAAATNFG QVFCQYEIEF IEPVNPTVNL 

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References

[1]"Nucleotide sequence of the genome of a citrus isolate of olive latent virus 1."
Grieco F., Savino V., Martelli G.P.
Arch. Virol. 141:825-838(1996) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: citrus EMBL CAA59981.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
X85989 Genomic RNA. Translation: CAA59981.1.
RefSeqNP_043911.1. NC_001721.1.

3D structure databases

ProteinModelPortalQ83942.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID1440673.

Family and domain databases

InterProIPR000937. Capsid_prot_S-dom_vir.
[Graphical view]
PfamPF00729. Viral_coat. 1 hit.
[Graphical view]
PRINTSPR00233. ICOSAHEDRAL.
ProtoNetSearch...

Entry information

Entry nameQ83942_9TOMB
AccessionPrimary (citable) accession number: Q83942
Entry history
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: May 1, 2013
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)