##gff-version 3 Q83883 UniProtKB Chain 1 1789 . . . ID=PRO_0000341617;Note=Genome polyprotein Q83883 UniProtKB Chain 1 398 . . . ID=PRO_0000341618;Note=Protein p48 Q83883 UniProtKB Chain 399 761 . . . ID=PRO_0000341619;Note=NTPase Q83883 UniProtKB Chain 762 962 . . . ID=PRO_0000341620;Note=Protein p22 Q83883 UniProtKB Chain 963 1100 . . . ID=PRO_0000341621;Note=Viral genome-linked protein Q83883 UniProtKB Chain 1101 1281 . . . ID=PRO_0000341622;Note=3C-like protease Q83883 UniProtKB Chain 1282 1789 . . . ID=PRO_0000341623;Note=RNA-directed RNA polymerase Q83883 UniProtKB Transmembrane 359 379 . . . Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 Q83883 UniProtKB Transmembrane 402 422 . . . Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 Q83883 UniProtKB Transmembrane 870 890 . . . Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 Q83883 UniProtKB Domain 532 697 . . . Note=SF3 helicase;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00551 Q83883 UniProtKB Domain 1101 1281 . . . Note=Peptidase C37;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00870 Q83883 UniProtKB Domain 1516 1637 . . . Note=RdRp catalytic;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00539 Q83883 UniProtKB Region 1 25 . . . Note=Disordered;Ontology_term=ECO:0000256;evidence=ECO:0000256|SAM:MobiDB-lite Q83883 UniProtKB Region 958 981 . . . Note=Disordered;Ontology_term=ECO:0000256;evidence=ECO:0000256|SAM:MobiDB-lite Q83883 UniProtKB Compositional bias 10 25 . . . Note=Polar residues;Ontology_term=ECO:0000256;evidence=ECO:0000256|SAM:MobiDB-lite Q83883 UniProtKB Active site 1130 1130 . . . Note=For 3CLpro activity;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00870 Q83883 UniProtKB Active site 1154 1154 . . . Note=For 3CLpro activity;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00870 Q83883 UniProtKB Active site 1239 1239 . . . Note=For 3CLpro activity;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00870 Q83883 UniProtKB Binding site 560 567 . . . Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00551 Q83883 UniProtKB Site 398 399 . . . Note=Cleavage%3B by 3CLpro Q83883 UniProtKB Site 761 762 . . . Note=Cleavage%3B by 3CLpro Q83883 UniProtKB Site 962 963 . . . Note=Cleavage%3B by 3CLpro Q83883 UniProtKB Site 1100 1101 . . . Note=Cleavage%3B by 3CLpro Q83883 UniProtKB Site 1281 1282 . . . Note=Cleavage%3B by 3CLpro Q83883 UniProtKB Modified residue 992 992 . . . Note=O-(5'-phospho-RNA)-tyrosine;Ontology_term=ECO:0000250;evidence=ECO:0000250 Q83883 UniProtKB Mutagenesis 394 394 . . . Note=No effect on p48-p41 cleavage. D->A%2CE%2CN;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:12367748;Dbxref=PMID:12367748 Q83883 UniProtKB Mutagenesis 395 395 . . . Note=Complete loss of p48-p41 cleavage. F->G;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:12367748;Dbxref=PMID:12367748 Q83883 UniProtKB Mutagenesis 395 395 . . . Note=No effect on p48-p41 cleavage. F->I%2CY;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:12367748;Dbxref=PMID:12367748 Q83883 UniProtKB Mutagenesis 398 398 . . . Note=No effect on p48-p41 cleavage. Q->E%2CN;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:12367748;Dbxref=PMID:12367748 Q83883 UniProtKB Mutagenesis 398 398 . . . Note=Complete loss of p48-p41 cleavage. Q->G;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:12367748;Dbxref=PMID:12367748 Q83883 UniProtKB Mutagenesis 399 399 . . . Note=No effect on p48-p41 cleavage. G->A;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:12367748;Dbxref=PMID:12367748 Q83883 UniProtKB Mutagenesis 1154 1154 . . . Note=Complete loss of 3CLpro activity. E->G;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:12367748;Dbxref=PMID:12367748 Q83883 UniProtKB Mutagenesis 1167 1167 . . . Note=No effect on 3CLpro activity. D->G;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:12367748;Dbxref=PMID:12367748 Q83883 UniProtKB Mutagenesis 1281 1281 . . . Note=No effect on 3CLpro activity. E->Q;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:12367748;Dbxref=PMID:12367748 Q83883 UniProtKB Helix 1103 1106 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5DGJ Q83883 UniProtKB Beta strand 1109 1112 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5DGJ Q83883 UniProtKB Beta strand 1115 1128 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5DGJ Q83883 UniProtKB Helix 1129 1131 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5DGJ Q83883 UniProtKB Beta strand 1137 1139 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5DGJ Q83883 UniProtKB Helix 1144 1146 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5DGJ Q83883 UniProtKB Beta strand 1147 1152 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5DGJ Q83883 UniProtKB Beta strand 1155 1162 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5DGJ Q83883 UniProtKB Beta strand 1182 1188 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5DGJ Q83883 UniProtKB Beta strand 1190 1192 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:2LNC Q83883 UniProtKB Beta strand 1194 1209 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5DGJ Q83883 UniProtKB Beta strand 1212 1221 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5DGJ Q83883 UniProtKB Helix 1223 1225 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5DGJ Q83883 UniProtKB Helix 1226 1229 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5TG1 Q83883 UniProtKB Turn 1232 1234 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5E0J Q83883 UniProtKB Helix 1236 1238 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:6BID Q83883 UniProtKB Beta strand 1242 1247 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5DGJ Q83883 UniProtKB Beta strand 1250 1260 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5DGJ Q83883 UniProtKB Turn 1262 1265 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5E0J Q83883 UniProtKB Beta strand 1266 1270 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:5DGJ Q83883 UniProtKB Beta strand 1275 1278 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:4IN2