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Protein
Submitted name:

Coat protein

Gene
N/A
Organism
Southern bean mosaic virus
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. structural molecule activity Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Coat proteinImported
OrganismiSouthern bean mosaic virusImported
Taxonomic identifieri12139 [NCBI]
Taxonomic lineageiVirusesssRNA positive-strand viruses, no DNA stageSobemovirus

Subcellular locationi

GO - Cellular componenti

  1. viral capsid Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Capsid proteinImported, Virion

Structurei

3D structure databases

ProteinModelPortaliQ83473.
SMRiQ83473. Positions 38-261.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Family and domain databases

Gene3Di2.60.120.20. 1 hit.
InterProiIPR000937. Capsid_prot_S-dom_vir.
IPR029053. Viral_coat.
[Graphical view]
PfamiPF00729. Viral_coat. 1 hit.
[Graphical view]
PRINTSiPR00233. ICOSAHEDRAL.
PROSITEiPS00555. ICOSAH_VIR_COAT_S. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q83473-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MATRLTKKQL AQAIQNTLPN PPRRKRRAKR RAAQVPKPTQ AGVSMAPIAQ
60 70 80 90 100
GTMVRLREPS LRTAGGVTVL THSELSTELS VTNAIVITSE LVMPYTMGTW
110 120 130 140 150
LRGVAANWSK YSLLSVTYTY LPSCPSTTSG SIHMGFQYDM ADTLPVSVNQ
160 170 180 190 200
LSNLRGYVSG QVWSGSSGLC YINGTRCLDT ANAITTTLDV GQLGKKWYPF
210 220 230 240 250
KTSTDFTTAV GVNVNIATPL VPARLIIAML DGSSSTAVST GRLYVSYTIQ
260
LIEPTALALN N
Length:261
Mass (Da):28,106
Last modified:November 1, 1996 - v1
Checksum:i069F9F1852F91C0F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L34672 Genomic RNA. Translation: AAA66951.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L34672 Genomic RNA. Translation: AAA66951.1.

3D structure databases

ProteinModelPortaliQ83473.
SMRiQ83473. Positions 38-261.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di2.60.120.20. 1 hit.
InterProiIPR000937. Capsid_prot_S-dom_vir.
IPR029053. Viral_coat.
[Graphical view]
PfamiPF00729. Viral_coat. 1 hit.
[Graphical view]
PRINTSiPR00233. ICOSAHEDRAL.
PROSITEiPS00555. ICOSAH_VIR_COAT_S. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Nucleotide sequence of the bean strain of southern bean mosaic virus."
    Othman Y., Hull R.
    Virology 206:287-297(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: BeanImported.

Entry informationi

Entry nameiQ83473_9VIRU
AccessioniPrimary (citable) accession number: Q83473
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: October 29, 2014
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.