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Q83473 (Q83473_9VIRU) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Coat protein EMBL AAA66951.1
OrganismSouthern bean mosaic virus EMBL AAA66951.1
Taxonomic identifier12139 [NCBI]
Taxonomic lineageViruses › ssRNA positive-strand viruses, no DNA stage › Sobemovirus

Protein attributes

Sequence length261 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Cellular componentVirion
   Molecular functionCapsid protein EMBL AAA66951.1
Gene Ontology (GO)
   Cellular_componentviral capsid

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionstructural molecule activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q83473 [UniParc].

Last modified November 1, 1996. Version 1.
Checksum: 069F9F1852F91C0F

FASTA26128,106
        10         20         30         40         50         60 
MATRLTKKQL AQAIQNTLPN PPRRKRRAKR RAAQVPKPTQ AGVSMAPIAQ GTMVRLREPS 

        70         80         90        100        110        120 
LRTAGGVTVL THSELSTELS VTNAIVITSE LVMPYTMGTW LRGVAANWSK YSLLSVTYTY 

       130        140        150        160        170        180 
LPSCPSTTSG SIHMGFQYDM ADTLPVSVNQ LSNLRGYVSG QVWSGSSGLC YINGTRCLDT 

       190        200        210        220        230        240 
ANAITTTLDV GQLGKKWYPF KTSTDFTTAV GVNVNIATPL VPARLIIAML DGSSSTAVST 

       250        260 
GRLYVSYTIQ LIEPTALALN N

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References

[1]"Nucleotide sequence of the bean strain of southern bean mosaic virus."
Othman Y., Hull R.
Virology 206:287-297(1995) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Bean EMBL AAA66951.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		L34672 Genomic RNA. Translation: AAA66951.1.

3D structure databases

ProteinModelPortalQ83473.
SMRQ83473. Positions 38-261.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

InterProIPR000937. Capsid_prot_S-dom_vir.
[Graphical view]
PfamPF00729. Viral_coat. 1 hit.
[Graphical view]
PRINTSPR00233. ICOSAHEDRAL.
PROSITEPS00555. ICOSAH_VIR_COAT_S. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ83473_9VIRU
AccessionPrimary (citable) accession number: Q83473
Entry history
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: May 29, 2013
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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