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Protein
Submitted name:

Uncharacterized protein

Gene
N/A
Organism
Porcine adenovirus B serotype 4 (PAdV-4) (Porcine adenovirus 4)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei424 – 4241N-acetyl-D-glucosamineCombined sources
Binding sitei435 – 4351N-acetyl-D-glucosamineCombined sources
Binding sitei439 – 4391N-acetyl-D-glucosamineCombined sources
Binding sitei451 – 4511GalactoseCombined sources
Binding sitei462 – 4621N-acetyl-D-glucosamineCombined sources
Binding sitei574 – 5741GalactoseCombined sources
Binding sitei585 – 5851N-acetyl-D-glucosamineCombined sources
Binding sitei598 – 5981Galactose; via carbonyl oxygenCombined sources
Binding sitei629 – 6291GalactoseCombined sources

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
OrganismiPorcine adenovirus B serotype 4 (PAdV-4) (Porcine adenovirus 4)Imported
Taxonomic identifieri35267 [NCBI]
Taxonomic lineageiVirusesdsDNA viruses, no RNA stageAdenoviridaeMastadenovirusPorcine mastadenovirus B
Virus hostiSus scrofa (Pig) [TaxID: 9823]

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2WSTX-ray3.20A/B/C/D/E/F116-291[»]
2WSUX-ray1.90A/B/C/D393-703[»]
2WSVX-ray2.00A393-703[»]
2WT0X-ray1.91A393-703[»]
2WT1X-ray1.90A393-703[»]
2WT2X-ray2.50A/B393-703[»]
ProteinModelPortaliQ83467.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ83467.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini394 – 523130GalectinInterPro annotationAdd
BLAST
Domaini548 – 683136GalectinInterPro annotationAdd
BLAST

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni435 – 4395Galactose bindingCombined sources
Regioni459 – 4624Galactose bindingCombined sources
Regioni585 – 5862Galactose bindingCombined sources

Family and domain databases

Gene3Di2.10.25.20. 1 hit.
2.60.120.200. 2 hits.
2.60.90.10. 1 hit.
InterProiIPR000931. Adeno_fibre.
IPR000978. Adeno_fibre_knob.
IPR008982. Adenovirus_pIV-rel_att.
IPR009013. Attachment_protein_shaft_dom.
IPR013320. ConA-like_dom.
IPR001079. Galectin_CRD.
[Graphical view]
PfamiPF00541. Adeno_knob. 1 hit.
PF00337. Gal-bind_lectin. 2 hits.
[Graphical view]
PRINTSiPR00307. ADENOVSFIBRE.
SMARTiSM00908. Gal-bind_lectin. 2 hits.
SM00276. GLECT. 2 hits.
[Graphical view]
SUPFAMiSSF49835. SSF49835. 1 hit.
SSF49899. SSF49899. 2 hits.
PROSITEiPS51304. GALECTIN. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q83467-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKRSVPSDFN PVYPYDYQPI SLMPAFYDNY GFHEGPSGVL SLNIANPLGY
60 70 80 90 100
TPRKKLCLKL GEGLALDSDG HLRVQIPDMQ AQPPLLYQGH RLSLLFDADA
110 120 130 140 150
GFHLTEDGAL SLTKTLVYPT LWTGPAPEAN VTFSGENSPS GILRLCLSRT
160 170 180 190 200
GGTVIGTLSV QGSLTNPSTG QTLGMNLYFD ADGNVLSESN LVRGSWGMKD
210 220 230 240 250
QDTLVTPIAN GQYLMPNLTA YPRLIQTLTS SYIYTQAHLD HNNSVVDIKI
260 270 280 290 300
GLNTDLRPTA AYGLSFTMTF TNSPPTSFGT DLVQFGYLGQ DSSPSFLREL
310 320 330 340 350
PLASEAGYFG KLAAASEEMP APPEAQTQDQ AAEEPPAPAE AEAPAPAEAE
360 370 380 390 400
AEAEPPRKPP RGDLAALYNR VHSDTRAEDT PTSPELVTTL PDPFVLPLPD
410 420 430 440 450
GVPTGASIVL EGTLTPSAVF FTLDLVTGPA SLALHFNVRL PLEGEKHIVC
460 470 480 490 500
NSREGSSNWG EEVRPQEFPF EREKPFVLVI VIQSDTYQIT VNGKPLVDFP
510 520 530 540 550
QRLQGITRAS LSGDLVFTRL TMYPPGDPRP TTLLPPPAAP LDVIPDAYVL
560 570 580 590 600
NLPTGLTPRT LLTVTGTPTP LAEFFIVNLV YDLHYDSKNV ALHFNVGFTS
610 620 630 640 650
DSKGHIACNA RMNGTWGSEI TVSDFPFQRG KPFTLQILTR EADFQVLVDK
660 670 680 690 700
QPLTQFQYRL KELDQIKYVH MFGHVVQTHL EHQVPDTPVF STAGVSKVYP

QIL
Length:703
Mass (Da):76,650
Last modified:November 1, 1996 - v1
Checksum:iC2D9E7AEAEB3C0E1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U25120 Genomic DNA. Translation: AAB40001.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U25120 Genomic DNA. Translation: AAB40001.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2WSTX-ray3.20A/B/C/D/E/F116-291[»]
2WSUX-ray1.90A/B/C/D393-703[»]
2WSVX-ray2.00A393-703[»]
2WT0X-ray1.91A393-703[»]
2WT1X-ray1.90A393-703[»]
2WT2X-ray2.50A/B393-703[»]
ProteinModelPortaliQ83467.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Miscellaneous databases

EvolutionaryTraceiQ83467.

Family and domain databases

Gene3Di2.10.25.20. 1 hit.
2.60.120.200. 2 hits.
2.60.90.10. 1 hit.
InterProiIPR000931. Adeno_fibre.
IPR000978. Adeno_fibre_knob.
IPR008982. Adenovirus_pIV-rel_att.
IPR009013. Attachment_protein_shaft_dom.
IPR013320. ConA-like_dom.
IPR001079. Galectin_CRD.
[Graphical view]
PfamiPF00541. Adeno_knob. 1 hit.
PF00337. Gal-bind_lectin. 2 hits.
[Graphical view]
PRINTSiPR00307. ADENOVSFIBRE.
SMARTiSM00908. Gal-bind_lectin. 2 hits.
SM00276. GLECT. 2 hits.
[Graphical view]
SUPFAMiSSF49835. SSF49835. 1 hit.
SSF49899. SSF49899. 2 hits.
PROSITEiPS51304. GALECTIN. 2 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Sequence analysis of the fiber genomic region of a porcine adenovirus predicts a novel fiber protein."
    Kleiboeker S.B.
    Virus Res. 39:299-309(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: PAV-4Imported.
  2. "Crystallographic structure of porcine adenovirus type 4 fiber head and galectin domains."
    Guardado-Calvo P., Munoz E.M., Llamas-Saiz A.L., Fox G.C., Kahn R., Curiel D.T., Glasgow J.N., van Raaij M.J.
    J. Virol. 84:10558-10568(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.90 ANGSTROMS) OF 393-703 IN COMPLEX WITH GALACTOSE AND N-ACETYL-D-GLUCOSAMINE.

Entry informationi

Entry nameiQ83467_ADEP4
AccessioniPrimary (citable) accession number: Q83467
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: April 13, 2016
This is version 95 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.