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Protein
Submitted name:

Gag protein

Gene

gag

Organism
Murine leukemia virus
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Gag proteinImported
Gene namesi
Name:gagImported
OrganismiMurine leukemia virusImported
Taxonomic identifieri11786 [NCBI]
Taxonomic lineageiVirusesRetro-transcribing virusesRetroviridaeOrthoretrovirinaeGammaretrovirus

Subcellular locationi

GO - Cellular componenti

Structurei

3D structure databases

ProteinModelPortaliQ83383.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini503 – 518CCHC-typeInterPro annotationAdd BLAST16

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili440 – 473Sequence analysisAdd BLAST34

Keywords - Domaini

Coiled coilSequence analysis

Family and domain databases

Gene3Di1.10.150.180. 1 hit.
1.10.375.10. 1 hit.
4.10.60.10. 1 hit.
InterProiView protein in InterPro
IPR000840. G_retro_matrix.
IPR002079. Gag_p12.
IPR003036. Gag_P30.
IPR008919. Retrov_capsid_N.
IPR010999. Retrovr_matrix.
IPR001878. Znf_CCHC.
PfamiView protein in Pfam
PF01140. Gag_MA. 1 hit.
PF01141. Gag_p12. 1 hit.
PF02093. Gag_p30. 1 hit.
PF00098. zf-CCHC. 1 hit.
SMARTiView protein in SMART
SM00343. ZnF_C2HC. 1 hit.
SUPFAMiSSF47836. SSF47836. 1 hit.
SSF47943. SSF47943. 1 hit.
SSF57756. SSF57756. 1 hit.
PROSITEiView protein in PROSITE
PS50158. ZF_CCHC. 1 hit.

Sequencei

Sequence statusi: Complete.

Q83383-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGQTVTTPLS LTLEHWGDVQ RIASNQSVDV KKRRWVTFCS AEWPTFGVGW
60 70 80 90 100
PQDGTFNLDI ILQVKSKVFS PGPHGHPDQV PYIVTWEAIA YEPPPWVKPF
110 120 130 140 150
VSPKLSLSPT APILPSGPST QPPPRSALYP ALTPSIKPRP SKPQVLSDNG
160 170 180 190 200
GPLIDLLTED PPPYGEQGPS SSDGDGDREE ATSTPEIPAP SPMVSRLRGK
210 220 230 240 250
RDPPAAVSTT SRAFPLRLGG NGQLQYWQFS SSDLYNWKNN NPSFSEDPGK
260 270 280 290 300
LTALIESVLT THQPTWDDCQ QLLGTLLTGE EKQRVLLEAR KAVRGDDGRP
310 320 330 340 350
TQLPNEIEAA FPLERPDWDY TTLRGRNHLV LYRQLLLAGL QNAGRSPTNL
360 370 380 390 400
AKVKGITQGS NESPSAFLER LKEAYRRYTP YDPEDPGQET NVSMSFIWQS
410 420 430 440 450
APDIGRKLER LEDLKNKTLG DLVREAERIF NKRETPEERE ERIKRETEEK
460 470 480 490 500
EERRRAEDEQ KEKERDRRRQ REMSKLLATV VTGQRQDRQG GERRRPQLDK
510 520 530
DQCAYCKEKG HWARDCPKKP RGPRGPRPQT SLLTLDD
Length:537
Mass (Da):60,651
Last modified:December 1, 2001 - v2
Checksum:i2433A33B04BDD975
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L37060 Genomic DNA. Translation: AAA51038.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L37060 Genomic DNA. Translation: AAA51038.1.

3D structure databases

ProteinModelPortaliQ83383.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di1.10.150.180. 1 hit.
1.10.375.10. 1 hit.
4.10.60.10. 1 hit.
InterProiView protein in InterPro
IPR000840. G_retro_matrix.
IPR002079. Gag_p12.
IPR003036. Gag_P30.
IPR008919. Retrov_capsid_N.
IPR010999. Retrovr_matrix.
IPR001878. Znf_CCHC.
PfamiView protein in Pfam
PF01140. Gag_MA. 1 hit.
PF01141. Gag_p12. 1 hit.
PF02093. Gag_p30. 1 hit.
PF00098. zf-CCHC. 1 hit.
SMARTiView protein in SMART
SM00343. ZnF_C2HC. 1 hit.
SUPFAMiSSF47836. SSF47836. 1 hit.
SSF47943. SSF47943. 1 hit.
SSF57756. SSF57756. 1 hit.
PROSITEiView protein in PROSITE
PS50158. ZF_CCHC. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ83383_9GAMR
AccessioniPrimary (citable) accession number: Q83383
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: December 1, 2001
Last modified: October 5, 2016
This is version 78 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.