Q83093 (Q83093_9VIRU) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names	Submitted name: Polyprotein EMBL AAA79988.1
Organism	Lucerne transient streak virus EMBL AAA79988.1
Taxonomic identifier	12470 [NCBI]
Taxonomic lineage	Viruses › ssRNA viruses › ssRNA positive-strand viruses, no DNA stage › Sobemovirus

Protein attributes

Sequence length	919 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Catalytic activity	Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). SAAS SAAS007094
Sequence similarities	Contains 1 RdRp catalytic domain. SAAS SAAS007094

Ontologies

Keywords
Biological process	Viral RNA replication SAAS SAAS007094
Ligand	Nucleotide-binding SAAS SAAS007094
Molecular function	Hydrolase SAAS SAAS007094 Nucleotidyltransferase RNA-directed RNA polymerase SAAS SAAS007094 Transferase
Gene Ontology (GO)
Biological_process	transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro viral genome replication Inferred from electronic annotation. Source: InterPro
Cellular_component	integral to membrane Inferred from electronic annotation. Source: InterPro
Molecular_function	RNA binding Inferred from electronic annotation. Source: InterPro RNA-directed RNA polymerase activity Inferred from electronic annotation. Source: UniProtKB-KW nucleotide binding Inferred from electronic annotation. Source: UniProtKB-KW serine-type endopeptidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q83093 [UniParc]. Last modified November 1, 1996. Version 1. Checksum: C67044C00D6F8C7E	FASTA	919	101,281
	10 20 30 40 50 60 MLLNSVEVRD ETPPGMFINL VGEPKLIPEK GIVMDGVGED GKVCKVIVNP QWWRFLPGSA 70 80 90 100 110 120 ISKNGEDEAA VLDSVYSSVL TGTEPASLVL LKSGSQTVGF GARVSYEGCS DYLLTAHHVI 130 140 150 160 170 180 EPHEKLDLCK RGKVIPDLDL TTTYDCEDKF AEFAMIKVPS NYWSRLGVGV AKLSALSKKS 190 200 210 220 230 240 TVSLYGGTSS TGLTCSSGFA YKGKSGYAII HEASTTKGWS GTPLYVGNNI VGVHTGCGKA 250 260 270 280 290 300 GETNRGTNVR VLLDLSSGYE SDFSEISYGE IDLDNFRLRP NRQEYLPVTI KGKGRYLLGD 310 320 330 340 350 360 TDFVAMTEAR VKRVDDWEAL KDAEGPGGVK WSDWADEETS WIGRKMNNIY KAGVETIDLW 370 380 390 400 410 420 KGTDEPVESE TTSQLLRHLN CQGAGTPEGV APPSSTLQST DGNNPSLSPH GVCLFPKLED 430 440 450 460 470 480 RIVNLEKLVE KLLETLSSRQ VKSSQSSNST AGLSEVVGQK EDPSSSKPDG FDRPAPPPTS 490 500 510 520 530 540 PSQSESSPQN TQPQQSTESS GGQSGVKKKS QRRRGKSERQ KSTQKPPQVP LSVLGQSNAE 550 560 570 580 590 600 VLSRHGDLVY IAVAERLIAL SEADLEAHPK PSDLVRLGLC DPVRLFVKNE PHPANKVREG 610 620 630 640 650 660 RFRLISSVSL VDQLVERLLF GPQNKAEIAL WQSVPSKPGM GLSQKWQFEA LWKDLQIKHA 670 680 690 700 710 720 SAPAAEADIS GFDWSVQKWE LEADVCMRIE RGNFPARMRK AALNRFKCFA NAVFQLSNGE 730 740 750 760 770 780 LIEQGLPGLM KSGSYCTSST NSRIRCLMAE IIQAPWCIAM GDDSVEGYVE GARELYEELG 790 800 810 820 830 840 HTCKDYIPCA AEGEILKEVN FCSHSIAADR CYLQSWAKTL FRYLEHPDDF EELAVELQGC 850 860 870 880 890 900 QWPRIYKYLR RIGRVSDKIP EPREENGRED EKSKQKEEEE QQRTEEDYGT QQAASYCSEG 910 HDPSRYFGGG EEVFPCNPL

References

[1]	Jeffries A.C., Rathjen J.P., Symons R.H. Submitted (JUL-1995) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: New Zealand isolate EMBL AAA79988.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	U31286 Genomic RNA. Translation: AAA79988.1.
RefSeq	NP_043460.1. NC_001696.1.
3D structure databases
ProteinModelPortal	Q83093.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Family and domain databases
InterPro	IPR000382. Peptidase_S39B_luteovirus. IPR001795. RNA-dir_pol_luteovirus. IPR007094. RNA-dir_pol_PSvirus. IPR009003. Trypsin-like_Pept_dom. [Graphical view]
Pfam	PF02122. Peptidase_S39. 1 hit. PF02123. RdRP_4. 1 hit. [Graphical view]
PRINTS	PR00914. LVIRUSRNAPOL.
SUPFAM	SSF50494. Pept_Ser_Cys. 1 hit.
PROSITE	PS50507. RDRP_SSRNA_POS. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q83093_9VIRU

Accession

Primary (citable) accession number: Q83093

Entry history

Integrated into UniProtKB/TrEMBL:	November 1, 1996
Last sequence update:	November 1, 1996
Last modified:	March 6, 2013
This is version 56 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)