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Protein

Superoxide dismutase

Gene

sodB

Organism
Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotationImported

Enzyme and pathway databases

BioCyciNEUR228410:GJNO-892-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Name:sodBImported
Ordered Locus Names:NE0870Imported
OrganismiNitrosomonas europaea (strain ATCC 19718 / NBRC 14298)Imported
Taxonomic identifieri228410 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaNitrosomonadalesNitrosomonadaceaeNitrosomonas
ProteomesiUP000001416 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi228410.NE0870.

Structurei

3D structure databases

ProteinModelPortaliQ82W28.
SMRiQ82W28. Positions 17-211.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000013584.
KOiK04564.
OMAiRRLEHAM.
OrthoDBiEOG63NMNT.
PhylomeDBiQ82W28.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q82W28-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSTNLDNFSR AAQSGDTYVL APLPYADNAL EPVISAHTLS FHYGKHHKAY
60 70 80 90 100
VDNLNKLVAG TPFSGQSLEQ IITATAGQAD KAGIFNNAAQ IWNHMFYWYS
110 120 130 140 150
LSPKGGGEPP AALKQKIEES FGSVEAFKQE FANAAITQFG SGWAWLAQEG
160 170 180 190 200
SKLAIIKTSN ADSPLTRGIR PLLTIDVWEH AYYLDFQNRR PDYVNTVIDK
210
LINWEFAAAN LG
Length:212
Mass (Da):23,356
Last modified:June 1, 2003 - v1
Checksum:iECAACF3B3828EE24
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL954747 Genomic DNA. Translation: CAD84781.1.
RefSeqiNP_840944.1. NC_004757.1.
WP_011111481.1. NC_004757.1.

Genome annotation databases

EnsemblBacteriaiCAD84781; CAD84781; NE0870.
KEGGineu:NE0870.
PATRICi22712750. VBINitEur56163_0977.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL954747 Genomic DNA. Translation: CAD84781.1.
RefSeqiNP_840944.1. NC_004757.1.
WP_011111481.1. NC_004757.1.

3D structure databases

ProteinModelPortaliQ82W28.
SMRiQ82W28. Positions 17-211.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi228410.NE0870.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAD84781; CAD84781; NE0870.
KEGGineu:NE0870.
PATRICi22712750. VBINitEur56163_0977.

Phylogenomic databases

HOGENOMiHOG000013584.
KOiK04564.
OMAiRRLEHAM.
OrthoDBiEOG63NMNT.
PhylomeDBiQ82W28.

Enzyme and pathway databases

BioCyciNEUR228410:GJNO-892-MONOMER.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of the ammonia-oxidizing bacterium and obligate chemolithoautotroph Nitrosomonas europaea."
    Chain P., Lamerdin J., Larimer F., Regala W., Land M., Hauser L., Hooper A., Klotz M., Norton J., Sayavedra-Soto L., Arciero D., Hommes N., Whittaker M., Arp D.
    J. Bacteriol. 185:2759-2773(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 19718 / NBRC 14298Imported.

Entry informationi

Entry nameiQ82W28_NITEU
AccessioniPrimary (citable) accession number: Q82W28
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: April 29, 2015
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.