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Protein
Submitted name:

Helix-turn-helix motif

Gene

NE1354

Organism
Nitrosomonas europaea (strain ATCC 19718 / CIP 103999 / KCTC 2705 / NBRC 14298)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciNEUR228410:GJNO-1338-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Helix-turn-helix motifImported
Gene namesi
Ordered Locus Names:NE1354Imported
OrganismiNitrosomonas europaea (strain ATCC 19718 / CIP 103999 / KCTC 2705 / NBRC 14298)Imported
Taxonomic identifieri228410 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaNitrosomonadalesNitrosomonadaceaeNitrosomonas
Proteomesi
  • UP000001416 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi228410.NE1354.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2A6CX-ray1.90A/B1-71[»]
ProteinModelPortaliQ82UW4.
SMRiQ82UW4.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ82UW4.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini10 – 66HTH cro/C1-type DNA-bindingInterPro annotationAdd BLAST57

Phylogenomic databases

eggNOGiCOG5606. LUCA.
HOGENOMiHOG000258408.
OMAiMRNERFN.
OrthoDBiPOG091H0BZU.
PhylomeDBiQ82UW4.

Family and domain databases

Gene3Di1.10.260.40. 1 hit.
InterProiIPR001387. Cro/C1-type_HTH.
IPR010982. Lambda_DNA-bd_dom.
[Graphical view]
SMARTiSM00530. HTH_XRE. 1 hit.
[Graphical view]
SUPFAMiSSF47413. SSF47413. 1 hit.

Sequencei

Sequence statusi: Complete.

Q82UW4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKMRSQLLIV LQEHLRNSGL TQFKAAELLG VTQPRVSDLM RGKIDLFSLE
60 70
SLIDMITSIG LKVEINIKDA A
Length:71
Mass (Da):7,939
Last modified:June 1, 2003 - v1
Checksum:iB6F4886B85A41A21
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL954747 Genomic DNA. Translation: CAD85265.1.
RefSeqiWP_011111931.1. NC_004757.1.

Genome annotation databases

EnsemblBacteriaiCAD85265; CAD85265; NE1354.
KEGGineu:NE1354.
PATRICi22713845. VBINitEur56163_1516.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL954747 Genomic DNA. Translation: CAD85265.1.
RefSeqiWP_011111931.1. NC_004757.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2A6CX-ray1.90A/B1-71[»]
ProteinModelPortaliQ82UW4.
SMRiQ82UW4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi228410.NE1354.

Protocols and materials databases

DNASUi1082304.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAD85265; CAD85265; NE1354.
KEGGineu:NE1354.
PATRICi22713845. VBINitEur56163_1516.

Phylogenomic databases

eggNOGiCOG5606. LUCA.
HOGENOMiHOG000258408.
OMAiMRNERFN.
OrthoDBiPOG091H0BZU.
PhylomeDBiQ82UW4.

Enzyme and pathway databases

BioCyciNEUR228410:GJNO-1338-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ82UW4.

Family and domain databases

Gene3Di1.10.260.40. 1 hit.
InterProiIPR001387. Cro/C1-type_HTH.
IPR010982. Lambda_DNA-bd_dom.
[Graphical view]
SMARTiSM00530. HTH_XRE. 1 hit.
[Graphical view]
SUPFAMiSSF47413. SSF47413. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ82UW4_NITEU
AccessioniPrimary (citable) accession number: Q82UW4
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: November 2, 2016
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.