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Protein

Probable chemoreceptor glutamine deamidase CheD

Gene

cheD

Organism
Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis.UniRule annotation

Catalytic activityi

Protein L-glutamine + H2O = protein L-glutamate + NH3.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Keywords - Biological processi

Chemotaxis

Enzyme and pathway databases

BioCyciNEUR228410:GJNO-1896-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable chemoreceptor glutamine deamidase CheDUniRule annotation (EC:3.5.1.44UniRule annotation)
Gene namesi
Name:cheDUniRule annotation
Ordered Locus Names:NE1860
OrganismiNitrosomonas europaea (strain ATCC 19718 / NBRC 14298)
Taxonomic identifieri228410 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaNitrosomonadalesNitrosomonadaceaeNitrosomonas
Proteomesi
  • UP000001416 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 201201Probable chemoreceptor glutamine deamidase CheDPRO_0000251046Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi228410.NE1860.

Structurei

3D structure databases

ProteinModelPortaliQ82TM5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the CheD family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108Z4W. Bacteria.
COG1871. LUCA.
HOGENOMiHOG000273194.
KOiK03411.
OMAiVLDIYPR.
OrthoDBiEOG6WHNQB.
PhylomeDBiQ82TM5.

Family and domain databases

HAMAPiMF_01440. CheD.
InterProiIPR005659. Chemorcpt_Glu_NH3ase_CheD.
IPR011324. Cytotoxic_necrot_fac-like_cat.
[Graphical view]
PfamiPF03975. CheD. 1 hit.
[Graphical view]
SUPFAMiSSF64438. SSF64438. 1 hit.

Sequencei

Sequence statusi: Complete.

Q82TM5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVNPQFASNF YFDQRLNTEA VKLLPGEYFV TTRNMVLSTV LGSCVSACIY
60 70 80 90 100
DGQSGVGGMN HFMLPRGEDD QGLQVECARF GGYAMDILIR ELLRNGAHKE
110 120 130 140 150
NLVSKVFGGG NVQRAMVSSM IGSQNTRFVK KYLAERGIPI LAADLEGNHP
160 170 180 190 200
RKIHFFPKNG RVLQKKLYVS RNDTIVEREQ NYSRLLLSVA QSAIQPGTRE

N
Length:201
Mass (Da):22,448
Last modified:June 1, 2003 - v1
Checksum:iE7041B7FB1CD9299
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL954747 Genomic DNA. Translation: CAD85771.1.
RefSeqiWP_011112398.1. NC_004757.1.

Genome annotation databases

EnsemblBacteriaiCAD85771; CAD85771; NE1860.
KEGGineu:NE1860.
PATRICi22714991. VBINitEur56163_2082.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL954747 Genomic DNA. Translation: CAD85771.1.
RefSeqiWP_011112398.1. NC_004757.1.

3D structure databases

ProteinModelPortaliQ82TM5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi228410.NE1860.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAD85771; CAD85771; NE1860.
KEGGineu:NE1860.
PATRICi22714991. VBINitEur56163_2082.

Phylogenomic databases

eggNOGiENOG4108Z4W. Bacteria.
COG1871. LUCA.
HOGENOMiHOG000273194.
KOiK03411.
OMAiVLDIYPR.
OrthoDBiEOG6WHNQB.
PhylomeDBiQ82TM5.

Enzyme and pathway databases

BioCyciNEUR228410:GJNO-1896-MONOMER.

Family and domain databases

HAMAPiMF_01440. CheD.
InterProiIPR005659. Chemorcpt_Glu_NH3ase_CheD.
IPR011324. Cytotoxic_necrot_fac-like_cat.
[Graphical view]
PfamiPF03975. CheD. 1 hit.
[Graphical view]
SUPFAMiSSF64438. SSF64438. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of the ammonia-oxidizing bacterium and obligate chemolithoautotroph Nitrosomonas europaea."
    Chain P., Lamerdin J.E., Larimer F.W., Regala W., Lao V., Land M.L., Hauser L., Hooper A.B., Klotz M.G., Norton J., Sayavedra-Soto L.A., Arciero D.M., Hommes N.G., Whittaker M.M., Arp D.J.
    J. Bacteriol. 185:2759-2773(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 19718 / NBRC 14298.

Entry informationi

Entry nameiCHED_NITEU
AccessioniPrimary (citable) accession number: Q82TM5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 3, 2006
Last sequence update: June 1, 2003
Last modified: December 9, 2015
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.