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Q82MG3

- Q82MG3_STRAW

UniProt

Q82MG3 - Q82MG3_STRAW

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Protein
Submitted name:

Putative DNA ligase

Gene

ligC

Organism
Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciSAVE227882:GJU1-1708-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative DNA ligaseImported
Gene namesi
Name:ligCImported
Ordered Locus Names:SAV_1697Imported
OrganismiStreptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680)Imported
Taxonomic identifieri227882 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptomycineaeStreptomycetaceaeStreptomyces
ProteomesiUP000000428: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi227882.SAV_1697.

Structurei

3D structure databases

ProteinModelPortaliQ82MG3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000222508.
KOiK01971.
OMAiHERTADC.
OrthoDBiEOG63NMFT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q82MG3-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MDLPVMPPVK PMLAKSVAKI PPDMQYEAKW DGFRAIVFRD GTEVELGSRT
60 70 80 90 100
GKPLTRYFPE LVEALRDRLP ERCVIDGEIV IARDGRLDFD ALTERIHPAE
110 120 130 140 150
SRVRMLAEKT PASFVAFDLL ALADDSLLDT PLTERRALLE SALSGVTAPV
160 170 180 190 200
HVAPATTDRE VAEQWFEQYE GAGLDGVIAK PLTLRYRQDE RAMFKVKHER
210 220 230 240 250
TADVVVAGYR LHKSGPVVGS LLLGLYDDRG ALQHVGVSAA FPMKRRAELV
260 270 280 290 300
EELEPLRMED AAGHPWAAWS NEAAHETARL PGAPSRWSGK KDLSWVPLRP
310 320 330 340 350
ERVAEVAYDH MENGARFRHT ARFRRWRPDR TPESCTYAQL EEPVSYDLTE

ILGSRG
Length:356
Mass (Da):39,972
Last modified:June 1, 2003 - v1
Checksum:i3F04C8E79C9CDF88
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000030 Genomic DNA. Translation: BAC69408.1.
RefSeqiNP_822873.1. NC_003155.4.
WP_010983136.1. NC_003155.4.

Genome annotation databases

EnsemblBacteriaiBAC69408; BAC69408; SAV_1697.
GeneIDi1210259.
KEGGisma:SAV_1697.
PATRICi23716789. VBIStrAve112782_1809.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000030 Genomic DNA. Translation: BAC69408.1 .
RefSeqi NP_822873.1. NC_003155.4.
WP_010983136.1. NC_003155.4.

3D structure databases

ProteinModelPortali Q82MG3.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 227882.SAV_1697.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAC69408 ; BAC69408 ; SAV_1697 .
GeneIDi 1210259.
KEGGi sma:SAV_1697.
PATRICi 23716789. VBIStrAve112782_1809.

Phylogenomic databases

HOGENOMi HOG000222508.
KOi K01971.
OMAi HERTADC.
OrthoDBi EOG63NMFT.

Enzyme and pathway databases

BioCyci SAVE227882:GJU1-1708-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Genome sequence of an industrial microorganism Streptomyces avermitilis: deducing the ability of producing secondary metabolites."
    Omura S., Ikeda H., Ishikawa J., Hanamoto A., Takahashi C., Shinose M., Takahashi Y., Horikawa H., Nakazawa H., Osonoe T., Kikuchi H., Shiba T., Sakaki Y., Hattori M.
    Proc. Natl. Acad. Sci. U.S.A. 98:12215-12220(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680Imported.
  2. "Complete genome sequence and comparative analysis of the industrial microorganism Streptomyces avermitilis."
    Ikeda H., Ishikawa J., Hanamoto A., Shinose M., Kikuchi H., Shiba T., Sakaki Y., Hattori M., Omura S.
    Nat. Biotechnol. 21:526-531(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiQ82MG3_STRAW
AccessioniPrimary (citable) accession number: Q82MG3
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: October 29, 2014
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3