Q82MG3 (Q82MG3_STRAW) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative DNA ligase EMBL BAC69408.1

Gene names

Name:	ligC EMBL BAC69408.1
Ordered Locus Names:	SAV_1697 EMBL BAC69408.1

Organism

Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680) [Complete proteome] [HAMAP] EMBL BAC69408.1

Taxonomic identifier

227882 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Streptomycineae › Streptomycetaceae › Streptomyces › Streptomyces avermitilis

Protein attributes

Sequence length	356 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL BAC69408.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA ligation involved in DNA repair Inferred from electronic annotation. Source: InterPro DNA recombination Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q82MG3 [UniParc]. Last modified June 1, 2003. Version 1. Checksum: 3F04C8E79C9CDF88	FASTA	356	39,972
	10 20 30 40 50 60 MDLPVMPPVK PMLAKSVAKI PPDMQYEAKW DGFRAIVFRD GTEVELGSRT GKPLTRYFPE 70 80 90 100 110 120 LVEALRDRLP ERCVIDGEIV IARDGRLDFD ALTERIHPAE SRVRMLAEKT PASFVAFDLL 130 140 150 160 170 180 ALADDSLLDT PLTERRALLE SALSGVTAPV HVAPATTDRE VAEQWFEQYE GAGLDGVIAK 190 200 210 220 230 240 PLTLRYRQDE RAMFKVKHER TADVVVAGYR LHKSGPVVGS LLLGLYDDRG ALQHVGVSAA 250 260 270 280 290 300 FPMKRRAELV EELEPLRMED AAGHPWAAWS NEAAHETARL PGAPSRWSGK KDLSWVPLRP 310 320 330 340 350 ERVAEVAYDH MENGARFRHT ARFRRWRPDR TPESCTYAQL EEPVSYDLTE ILGSRG

References

[1]

"Genome sequence of an industrial microorganism Streptomyces avermitilis: deducing the ability of producing secondary metabolites." Omura S., Ikeda H., Ishikawa J., Hanamoto A., Takahashi C., Shinose M., Takahashi Y., Horikawa H., Nakazawa H., Osonoe T., Kikuchi H., Shiba T., Sakaki Y., Hattori M. Proc. Natl. Acad. Sci. U.S.A. 98:12215-12220(2001) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680.

[2]

"Complete genome sequence and comparative analysis of the industrial microorganism Streptomyces avermitilis." Ikeda H., Ishikawa J., Hanamoto A., Shinose M., Kikuchi H., Shiba T., Sakaki Y., Hattori M., Omura S. Nat. Biotechnol. 21:526-531(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BA000030 Genomic DNA. Translation: BAC69408.1.
RefSeq	NP_822873.1. NC_003155.4.
3D structure databases
ProteinModelPortal	Q82MG3.
ModBase	Search...
Protein-protein interaction databases
STRING	227882.SAV_1697.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	BAC69408; BAC69408; SAV_1697.
GeneID	1210259.
KEGG	sma:SAV_1697.
PATRIC	23716789. VBIStrAve112782_1809.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000222508.
KO	K01971.
OMA	FKIKHER.
ProtClustDB	PRK08224.
Enzyme and pathway databases
BioCyc	SAVE227882:GJU1-1708-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
PROSITE	PS00697. DNA_LIGASE_A1. 1 hit. PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q82MG3_STRAW

Accession

Primary (citable) accession number: Q82MG3

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 2003
Last sequence update:	June 1, 2003
Last modified:	May 1, 2013
This is version 65 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)