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Q82J36

- Q82J36_STRAW

UniProt

Q82J36 - Q82J36_STRAW

Protein
Submitted name:

Putative DNA ligase

Gene

ligD

Organism
Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 57 (01 Oct 2014)
      Sequence version 1 (01 Jun 2003)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ligase activity Source: UniProtKB-KW

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciSAVE227882:GJU1-2968-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative DNA ligaseImported
    Gene namesi
    Name:ligDImported
    Ordered Locus Names:SAV_2946Imported
    OrganismiStreptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680)Imported
    Taxonomic identifieri227882 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptomycineaeStreptomycetaceaeStreptomyces
    ProteomesiUP000000428: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi227882.SAV_2946.

    Structurei

    3D structure databases

    ProteinModelPortaliQ82J36.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000244654.
    KOiK01971.
    OMAiLMWAANL.
    OrthoDBiEOG6FV833.

    Family and domain databases

    InterProiIPR014145. LigD_pol.
    [Graphical view]
    TIGRFAMsiTIGR02778. ligD_pol. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q82J36-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTPITEVAGR RLALSNLEKV IYPATGFTKG EVLHYYATTA DALLAHLHDR    50
    PISFLRYPDG PDGQVFFAKN VPPGTPDWVV TAEVPRSEGP ARMVLVQDLA 100
    SLMWAANLVT EFHTHQWRIG TPGQADRLVF DLDPGPPATI VECCEVALWL 150
    RERLAADGIE SYAKTSGSKG LHLLAALEPT PSGRATEYAK ELAVAAEKDM 200
    PRLVLHRMTR SLRPGKVFVD WSQNAARKTT AAPYTLRARA EPTVSTPVTW 250
    EEVADCTAAR PLAFQAPDIA PRLQEHGDLL APLLDPGHAA PLP 293
    Length:293
    Mass (Da):31,946
    Last modified:June 1, 2003 - v1
    Checksum:i5050C3B57B9455F5
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000030 Genomic DNA. Translation: BAC70657.1.
    RefSeqiNP_824122.1. NC_003155.4.
    WP_010984378.1. NC_003155.4.

    Genome annotation databases

    EnsemblBacteriaiBAC70657; BAC70657; SAV_2946.
    GeneIDi1214117.
    KEGGisma:SAV_2946.
    PATRICi23719489. VBIStrAve112782_3153.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000030 Genomic DNA. Translation: BAC70657.1 .
    RefSeqi NP_824122.1. NC_003155.4.
    WP_010984378.1. NC_003155.4.

    3D structure databases

    ProteinModelPortali Q82J36.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 227882.SAV_2946.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAC70657 ; BAC70657 ; SAV_2946 .
    GeneIDi 1214117.
    KEGGi sma:SAV_2946.
    PATRICi 23719489. VBIStrAve112782_3153.

    Phylogenomic databases

    HOGENOMi HOG000244654.
    KOi K01971.
    OMAi LMWAANL.
    OrthoDBi EOG6FV833.

    Enzyme and pathway databases

    BioCyci SAVE227882:GJU1-2968-MONOMER.

    Family and domain databases

    InterProi IPR014145. LigD_pol.
    [Graphical view ]
    TIGRFAMsi TIGR02778. ligD_pol. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of an industrial microorganism Streptomyces avermitilis: deducing the ability of producing secondary metabolites."
      Omura S., Ikeda H., Ishikawa J., Hanamoto A., Takahashi C., Shinose M., Takahashi Y., Horikawa H., Nakazawa H., Osonoe T., Kikuchi H., Shiba T., Sakaki Y., Hattori M.
      Proc. Natl. Acad. Sci. U.S.A. 98:12215-12220(2001) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680Imported.
    2. "Complete genome sequence and comparative analysis of the industrial microorganism Streptomyces avermitilis."
      Ikeda H., Ishikawa J., Hanamoto A., Shinose M., Kikuchi H., Shiba T., Sakaki Y., Hattori M., Omura S.
      Nat. Biotechnol. 21:526-531(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

    Entry informationi

    Entry nameiQ82J36_STRAW
    AccessioniPrimary (citable) accession number: Q82J36
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 1, 2003
    Last sequence update: June 1, 2003
    Last modified: October 1, 2014
    This is version 57 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3