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Q82J36

- Q82J36_STRAW

UniProt

Q82J36 - Q82J36_STRAW

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Protein
Submitted name: Putative DNA ligase
Gene
ligD, SAV_2946
Organism
Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ligase activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciSAVE227882:GJU1-2968-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative DNA ligaseImported
Gene namesi
Name:ligDImported
Ordered Locus Names:SAV_2946Imported
OrganismiStreptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680)Imported
Taxonomic identifieri227882 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptomycineaeStreptomycetaceaeStreptomyces
ProteomesiUP000000428: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi227882.SAV_2946.

Structurei

3D structure databases

ProteinModelPortaliQ82J36.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000244654.
KOiK01971.
OMAiLMWAANL.
OrthoDBiEOG6FV833.

Family and domain databases

InterProiIPR014145. LigD_pol.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.

Sequencei

Sequence statusi: Complete.

Q82J36-1 [UniParc]FASTAAdd to Basket

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MTPITEVAGR RLALSNLEKV IYPATGFTKG EVLHYYATTA DALLAHLHDR    50
PISFLRYPDG PDGQVFFAKN VPPGTPDWVV TAEVPRSEGP ARMVLVQDLA 100
SLMWAANLVT EFHTHQWRIG TPGQADRLVF DLDPGPPATI VECCEVALWL 150
RERLAADGIE SYAKTSGSKG LHLLAALEPT PSGRATEYAK ELAVAAEKDM 200
PRLVLHRMTR SLRPGKVFVD WSQNAARKTT AAPYTLRARA EPTVSTPVTW 250
EEVADCTAAR PLAFQAPDIA PRLQEHGDLL APLLDPGHAA PLP 293
Length:293
Mass (Da):31,946
Last modified:June 1, 2003 - v1
Checksum:i5050C3B57B9455F5
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000030 Genomic DNA. Translation: BAC70657.1.
RefSeqiNP_824122.1. NC_003155.4.
WP_010984378.1. NC_003155.4.

Genome annotation databases

EnsemblBacteriaiBAC70657; BAC70657; SAV_2946.
GeneIDi1214117.
KEGGisma:SAV_2946.
PATRICi23719489. VBIStrAve112782_3153.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000030 Genomic DNA. Translation: BAC70657.1 .
RefSeqi NP_824122.1. NC_003155.4.
WP_010984378.1. NC_003155.4.

3D structure databases

ProteinModelPortali Q82J36.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 227882.SAV_2946.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAC70657 ; BAC70657 ; SAV_2946 .
GeneIDi 1214117.
KEGGi sma:SAV_2946.
PATRICi 23719489. VBIStrAve112782_3153.

Phylogenomic databases

HOGENOMi HOG000244654.
KOi K01971.
OMAi LMWAANL.
OrthoDBi EOG6FV833.

Enzyme and pathway databases

BioCyci SAVE227882:GJU1-2968-MONOMER.

Family and domain databases

InterProi IPR014145. LigD_pol.
[Graphical view ]
TIGRFAMsi TIGR02778. ligD_pol. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Genome sequence of an industrial microorganism Streptomyces avermitilis: deducing the ability of producing secondary metabolites."
    Omura S., Ikeda H., Ishikawa J., Hanamoto A., Takahashi C., Shinose M., Takahashi Y., Horikawa H., Nakazawa H., Osonoe T., Kikuchi H., Shiba T., Sakaki Y., Hattori M.
    Proc. Natl. Acad. Sci. U.S.A. 98:12215-12220(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680.
  2. "Complete genome sequence and comparative analysis of the industrial microorganism Streptomyces avermitilis."
    Ikeda H., Ishikawa J., Hanamoto A., Shinose M., Kikuchi H., Shiba T., Sakaki Y., Hattori M., Omura S.
    Nat. Biotechnol. 21:526-531(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680.

Entry informationi

Entry nameiQ82J36_STRAW
AccessioniPrimary (citable) accession number: Q82J36
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: September 3, 2014
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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