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Q82BH8 (Q82BH8_STRAW) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 82. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:prpH EMBL BAC73439.1
Ordered Locus Names:SAV_5727 EMBL BAC73439.1
OrganismStreptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680) [Complete proteome] [HAMAP] EMBL BAC73439.1
Taxonomic identifier227882 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptomycineaeStreptomycetaceaeStreptomyces

Protein attributes

Sequence length381 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains 1 HTH merR-type DNA-binding domain. RuleBase RU000703

Ontologies

Keywords
   LigandDNA-binding RuleBase RU000703
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processregulation of transcription, DNA-templated

Inferred from electronic annotation. Source: InterPro

   Molecular_functionDNA binding

Inferred from electronic annotation. Source: UniProtKB-KW

catalytic activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q82BH8 [UniParc].

Last modified June 1, 2003. Version 1.
Checksum: 601577DBF9992A21

FASTA38140,191
        10         20         30         40         50         60 
MLTIGAFAKA CRLSPKALRL YDELDLLRPA RVDPDTGYRY YAPEQLERAR LVAWLRRLGM 

        70         80         90        100        110        120 
PLARIRQVCA LDPGGAAREI RAYWARVEAE TTARRDLALF LVDHLTQSSQ APQASQSSAS 

       130        140        150        160        170        180 
SPSPQSSQSS PSSRKDTIML ELRYSALSDI GLVRDANQDT AYAGARVLAV ADGCGAGGAS 

       190        200        210        220        230        240 
ASTAAVEALK FLDEEPLPAG GVLNILEDAV QGAGRAVQDV AAAVGGSARD EIGTTLTAAV 

       250        260        270        280        290        300 
WTGSQLALVH IGDSRAYLLR DGELFLITHD HTVVQSLVDE GRLTPEEATV HPQRALLLKA 

       310        320        330        340        350        360 
LGGGPVPDPD LKLHDARPGD RYLLCSDGLS TVVPTEEIRR LLAAAPVPQA AARALVDAAN 

       370        380 
AAGGPDNVSC VVADVVEAGR Q 

« Hide

References

[1]"Genome sequence of an industrial microorganism Streptomyces avermitilis: deducing the ability of producing secondary metabolites."
Omura S., Ikeda H., Ishikawa J., Hanamoto A., Takahashi C., Shinose M., Takahashi Y., Horikawa H., Nakazawa H., Osonoe T., Kikuchi H., Shiba T., Sakaki Y., Hattori M.
Proc. Natl. Acad. Sci. U.S.A. 98:12215-12220(2001) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680.
[2]"Complete genome sequence and comparative analysis of the industrial microorganism Streptomyces avermitilis."
Ikeda H., Ishikawa J., Hanamoto A., Shinose M., Kikuchi H., Shiba T., Sakaki Y., Hattori M., Omura S.
Nat. Biotechnol. 21:526-531(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BA000030 Genomic DNA. Translation: BAC73439.1.
RefSeqNP_826904.1. NC_003155.4.

3D structure databases

ProteinModelPortalQ82BH8.
SMRQ82BH8. Positions 140-375.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING227882.SAV_5727.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAC73439; BAC73439; SAV_5727.
GeneID1216232.
KEGGsma:SAV_5727.
PATRIC23725458. VBIStrAve112782_6083.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000235782.
KOK01090.
OMANQDTAYA.
OrthoDBEOG65N17S.

Enzyme and pathway databases

BioCycSAVE227882:GJU1-5806-MONOMER.

Family and domain databases

Gene3D3.60.40.10. 1 hit.
InterProIPR009061. DNA-bd_dom_put.
IPR000551. MerR-type_HTH_dom.
IPR001932. PP2C-like_dom.
IPR015655. Protein_Pase_2C.
[Graphical view]
PANTHERPTHR13832. PTHR13832. 1 hit.
PfamPF00376. MerR. 1 hit.
[Graphical view]
SMARTSM00422. HTH_MERR. 1 hit.
SM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMSSF46955. SSF46955. 1 hit.
SSF81606. SSF81606. 1 hit.
PROSITEPS00552. HTH_MERR_1. 1 hit.
PS50937. HTH_MERR_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ82BH8_STRAW
AccessionPrimary (citable) accession number: Q82BH8
Entry history
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: May 14, 2014
This is version 82 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)