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Q829R6 (Q829R6_STRAW) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 64. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Putative dihydrodipicolinate synthase EMBL BAC74054.1
Gene names
Name:dapA5 EMBL BAC74054.1
Ordered Locus Names:SAV_6343 EMBL BAC74054.1
OrganismStreptomyces avermitilis [Complete proteome] [HAMAP]
Taxonomic identifier33903 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Streptomycineae › Streptomycetaceae › Streptomyces

Protein attributes

Sequence length315 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

L-aspartate 4-semialdehyde + pyruvate = dihydrodipicolinate + 2 H2O. SAAS SAAS005263

Pathway

Amino-acid biosynthesis; L-lysine biosynthesis via DAP pathway; (S)-tetrahydrodipicolinate from L-aspartate: step 3/4. SAAS SAAS005263

Subcellular location

Cytoplasm By similarity SAAS SAAS005263.

Ontologies

Keywords
   Biological processAmino-acid biosynthesis
Diaminopimelate biosynthesis SAAS SAAS005263
Lysine biosynthesis SAAS SAAS005263
   Cellular componentCytoplasm SAAS SAAS005263
   LigandSchiff base SAAS SAAS005263
   Molecular functionLyase SAAS SAAS005263
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processdiaminopimelate biosynthetic process

Inferred from electronic annotation. Source: HAMAP

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functiondihydrodipicolinate synthase activity

Inferred from electronic annotation. Source: HAMAP

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q829R6 [UniParc].

Last modified June 1, 2003. Version 1.
Checksum: C6E60BB5229BA767

FASTA31532,860
        10         20         30         40         50         60 
MELHGRAAET DRMTTQGTAQ GTAPFGRALC AMITPFTAAG TLDLDGARRL ADRLVSEGCD 

        70         80         90        100        110        120 
GLVLSGTTGE SPTTTDAEKS ALVRAVREAV GDRASIVAGV GTADTRHTVE LALEAEKAGA 

       130        140        150        160        170        180 
DGLLVVTPYY SRPPQEAVEA HFRDIADASG LPLVLYDIPG RTGTRIEPAT MIRLAEHPRI 

       190        200        210        220        230        240 
VAVKDCAYDL LGTQKVLART ELAYYTGCDE YVLALYASGG AGYVSTVANV APGHFRSILD 

       250        260        270        280        290        300 
AFDAGDPALA ARLQQRAVPL IESMMAAGLP GTVTSKALLG RLGLPSGPVR APLRPAGRET 

       310 
ADGLLALYEE LVSVS

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References

[1]"Genome sequence of an industrial microorganism Streptomyces avermitilis: deducing the ability of producing secondary metabolites."
Omura S., Ikeda H., Ishikawa J., Hanamoto A., Takahashi C., Shinose M., Takahashi Y., Horikawa H., Nakazawa H., Osonoe T., Kikuchi H., Shiba T., Sakaki Y., Hattori M.
Proc. Natl. Acad. Sci. U.S.A. 98:12215-12220(2001) [PubMed: 11572948] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165.
[2]"Complete genome sequence and comparative analysis of the industrial microorganism Streptomyces avermitilis."
Ikeda H., Ishikawa J., Hanamoto A., Shinose M., Kikuchi H., Shiba T., Sakaki Y., Hattori M., Omura S.
Nat. Biotechnol. 21:526-531(2003) [PubMed: 12692562] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		BA000030 Genomic DNA. Translation: BAC74054.1.
RefSeqNP_827519.1. NC_003155.4.

3D structure databases

HSSPHSSP built from PDB template 1O5K based on UniProtKB Q9X1K9.
ProteinModelPortalQ829R6.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID1211466.
GenomeReviewsGene locus SAV6343 in contig BA000030_GR.
KEGGsma:SAV_6343.
NMPDRfig|227882.1.peg.6345.
PATRIC23726746. VBIStrAve112782_6725.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG358848.
OMAAVKDCAY.
ProtClustDBPRK03170.

Enzyme and pathway databases

BioCycSAVE227882:SAV6343-MONOMER.

Family and domain databases

InterProIPR013785. Aldolase_TIM.
IPR002220. Dihydrodipicolinate_synth-like.
IPR020625. Dihydrodipicolinate_synth_AS.
IPR020624. Dihydrodipicolinate_synth_CS.
IPR005263. Dihydrodipicolinate_synth_DapA.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KOK01714.
PANTHERPTHR12128. DHDPS. 1 hit.
PfamPF00701. DHDPS. 1 hit.
[Graphical view]
PIRSFPIRSF001365. DHDPS. 1 hit.
PRINTSPR00146. DHPICSNTHASE.
TIGRFAMsTIGR00674. DapA. 1 hit.
PROSITEPS00665. DHDPS_1. 1 hit.
PS00666. DHDPS_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ829R6_STRAW
AccessionPrimary (citable) accession number: Q829R6
Entry history
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: December 14, 2011
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info