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Protein

DNA polymerase

Gene
N/A
Organism
Helicoverpa zea single nucleopolyhedrovirus
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1).UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

DNA-directed DNA polymeraseUniRule annotationImported, Nucleotidyltransferase, Transferase

Keywords - Biological processi

DNA replicationUniRule annotation

Keywords - Ligandi

DNA-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
DNA polymeraseUniRule annotation (EC:2.7.7.7UniRule annotation)
OrganismiHelicoverpa zea single nucleopolyhedrovirusImported
Taxonomic identifieri10468 [NCBI]
Taxonomic lineageiVirusesdsDNA viruses, no RNA stageBaculoviridaeAlphabaculovirus

Structurei

3D structure databases

ProteinModelPortaliQ82482.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini130 – 370241DNA_pol_B_exo1InterPro annotationAdd
BLAST
Domaini525 – 885361DNA_pol_BInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the DNA polymerase type-B family.UniRule annotation

Family and domain databases

Gene3Di3.30.420.10. 1 hit.
3.90.1600.10. 2 hits.
InterProiIPR006172. DNA-dir_DNA_pol_B.
IPR006133. DNA-dir_DNA_pol_B_exonuc.
IPR006134. DNA-dir_DNA_pol_B_multi_dom.
IPR023211. DNA_pol_palm_dom.
IPR012337. RNaseH-like_dom.
[Graphical view]
PfamiPF00136. DNA_pol_B. 1 hit.
PF03104. DNA_pol_B_exo1. 1 hit.
[Graphical view]
PRINTSiPR00106. DNAPOLB.
SMARTiSM00486. POLBc. 1 hit.
[Graphical view]
SUPFAMiSSF53098. SSF53098. 1 hit.

Sequencei

Sequence statusi: Complete.

Q82482-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDIALLTWND LIGQLLRFGN RQHRTVIEPE DVFRIVRMTY HDNCLLIFFT
60 70 80 90 100
GYVSSDPTKI FQFYMETKCD LYSYRRCYNV HTNNECRYKC KSYKTFVMPG
110 120 130 140 150
LRGSYNERIN IVHYKRTPGE HDRNNNKNCL DSFLKDINRV HMQTDLMEGN
160 170 180 190 200
YVQFKQRQCV TDHRLCLQSN DNTFKDIFTV IDPDSLKREI VPVIACYDIE
210 220 230 240 250
THSDGQRFSS ATVDNIISIS IVVRRDGVDK RICLYYMDDT AKDIKWNTDN
260 270 280 290 300
DAINAAEIWA VHFKKESDML KAFFSLFPLL NMDFLLDYNG DRFDLPFILE
310 320 330 340 350
RVKRLNSGKE IVIKRYDLSP VAIKTEQLCD KFQNKINTHY FTYYVHVDLY
360 370 380 390 400
QFLSSDSEQN DVENFQLNTV AKHYLNMQKV DLKITDMLRR YNEKLMKDII
410 420 430 440 450
VYNVQDCVLP IDLFLKLEIM DFMYTQCMLL YLCTDDVLRN ISHKVNVVLF
460 470 480 490 500
HKALINTRYD EKRNCTVPEP YFFNKHDLSV TSGRKRNAAG DSVDDQQMVD
510 520 530 540 550
LSLLQRRPVP VDMIPSNAVK LCGKRQRCVY KGGKVLEPQP GFKQWVVTLD
560 570 580 590 600
FNSLYLSIMM YEGICLSNVF VAQDDNVYLH KDLDAVNPKL LRELLDLRAK
610 620 630 640 650
YKNLRDKHEP GTFQYNLNDK IQNAVKRIAN SIYGYFGIFF KPLANYITKI
660 670 680 690 700
GREKLTEAIV RIQAMSNRAD ILKDFNLSRI NFRVIYGDTD SSFIQVDFEK
710 720 730 740 750
TDIPIKDQHN TIKTIVNDYV LKTLNSSWNG YKMALENVML SLILLKKKKY
760 770 780 790 800
CYLNSEQRIK YKGWLVKKDM PLFMRKSFRQ VVDSYLHGHS LACGLALLTK
810 820 830 840 850
LMTEYYDNFG VNNNYNEYGF SMTYNENSTS AKKRKTTTVS TSTRPNVLTI
860 870 880 890 900
AKKCYEDLKG SGTDFLPTNG DRIPYVLIDV EGSVTQKAFA LKLFDSSYNT
910 920 930 940 950
INWIKHMGIL CTFFNELIEV FGDSETFQYY FDQITSVFMA QQRYDVKYPV
960 970 980 990 1000
LVTINPKKLQ TADDSDDDSD DKESNVDDAN QCKPIPNHTT KFALHKRQKS
1010 1020
KMTKSMIIDN ECSVCKSAVC
Length:1,020
Mass (Da):119,104
Last modified:November 1, 1996 - v1
Checksum:i3EC6D0245F0E5271
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U11242 Genomic DNA. Translation: AAA58700.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U11242 Genomic DNA. Translation: AAA58700.1.

3D structure databases

ProteinModelPortaliQ82482.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di3.30.420.10. 1 hit.
3.90.1600.10. 2 hits.
InterProiIPR006172. DNA-dir_DNA_pol_B.
IPR006133. DNA-dir_DNA_pol_B_exonuc.
IPR006134. DNA-dir_DNA_pol_B_multi_dom.
IPR023211. DNA_pol_palm_dom.
IPR012337. RNaseH-like_dom.
[Graphical view]
PfamiPF00136. DNA_pol_B. 1 hit.
PF03104. DNA_pol_B_exo1. 1 hit.
[Graphical view]
PRINTSiPR00106. DNAPOLB.
SMARTiSM00486. POLBc. 1 hit.
[Graphical view]
SUPFAMiSSF53098. SSF53098. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Nucleotide sequence of the polyhedrin gene region of Helicoverpa zea single nucleocapsid nuclear polyhedrosis virus: placement of the virus in lepidopteran nuclear polyhedrosis virus group II."
    Cowan P., Bulach D., Goodge K., Robertson A., Tribe D.E.
    J. Gen. Virol. 75:3211-3218(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: ElkarImported.
  2. Bulach D.M.
    Submitted (JUN-1994) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: ElkarImported.

Entry informationi

Entry nameiQ82482_9ABAC
AccessioniPrimary (citable) accession number: Q82482
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: May 11, 2016
This is version 85 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.