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Q823Y5

- GLGB_CHLCV

UniProt

Q823Y5 - GLGB_CHLCV

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Protein

1,4-alpha-glucan branching enzyme GlgB

Gene
glgB, CCA_00268
Organism
Chlamydophila caviae (strain GPIC)
Status
Reviewed - Annotation score: 3 out of 5 - Protein inferred from homologyi

Functioni

Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position By similarity.UniRule annotation

Catalytic activityi

Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei400 – 4001Nucleophile By similarity
Active sitei453 – 4531Proton donor By similarity

GO - Molecular functioni

  1. 1,4-alpha-glucan branching enzyme activity Source: UniProtKB-HAMAP
  2. cation binding Source: InterPro
  3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Carbohydrate metabolism, Glycogen biosynthesis, Glycogen metabolism

Enzyme and pathway databases

BioCyciCCAV227941:GH8L-282-MONOMER.
UniPathwayiUPA00164.

Names & Taxonomyi

Protein namesi
Recommended name:
1,4-alpha-glucan branching enzyme GlgB (EC:2.4.1.18)
Alternative name(s):
1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase
Alpha-(1->4)-glucan branching enzyme
Glycogen branching enzyme
Short name:
BE
Gene namesi
Name:glgB
Ordered Locus Names:CCA_00268
OrganismiChlamydophila caviae (strain GPIC)
Taxonomic identifieri227941 [NCBI]
Taxonomic lineageiBacteriaChlamydiaeChlamydialesChlamydiaceaeChlamydia/Chlamydophila groupChlamydophila
ProteomesiUP000002193: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 7197191,4-alpha-glucan branching enzyme GlgBUniRule annotationPRO_0000188691Add
BLAST

Interactioni

Subunit structurei

Monomer By similarity.UniRule annotation

Protein-protein interaction databases

STRINGi227941.CCA00268.

Structurei

3D structure databases

ProteinModelPortaliQ823Y5.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0296.
KOiK00700.
OMAiISEGRHE.
OrthoDBiEOG6JX7GT.

Family and domain databases

Gene3Di2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPiMF_00685. GlgB.
InterProiIPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view]
PIRSFiPIRSF000463. GlgB. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 2 hits.
TIGRFAMsiTIGR01515. branching_enzym. 1 hit.

Sequencei

Sequence statusi: Complete.

Q823Y5-1 [UniParc]FASTAAdd to Basket

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MVERIINSED ISLLISGRQS NPHKFLGIIS ESSSQDRIIL FRPGAHFVAI    50
ELQGNIAQAT HHHSGIFSLV TPKGTLPHDY RIYHQNGLLA HDPYAFSPLW 100
GEMDSFLFHQ GTHYKIYERM GAIPCDVGGI LGVLFVVWAP HAQRVSVVGD 150
FNYWNGLVNP LRKVSDSGVW ELFIPGLDEG TLYKWELVTA SGEVLIKTDP 200
YGKGFDIPPQ VTSRVINSDR YTWHDQKWME NRKNTKDQPL AIYEVHVGSW 250
QWDNGRPLGY RELAKRLAQY CKELHYTHVE LLPITEHPLN ESWGYQVTGY 300
YAPTWRYGSF QDFQFFVDHL HCEGIGVILD WVPGHFPTDS FALASFDGEA 350
LYESVDHKDP LHPHWHTYTF DYRCSEVVNF LIGSALFWLD KMHIDGLRVD 400
AVTSMLYLDY GRKAGEWSPN IYGGNENLDA IEFIKHFNSV VHREFPAVLT 450
FAEESTDFPK VTESVDSGGL GFDYKWNLGW MHDTFRYIKV DPIFRSYHHN 500
DLTFSLWYAF NERYLLPLSH DEVVHGKGSL LQKIPGDTWT KFAHMRLLLS 550
YQICQPGKKL VFMGGEFAQW KEWSPDNSLD WHLLDNPYHA SLHKCVAKMN 600
ALYCELPYFW KGDHKQESFL WVDFKDTKNN VISYYRFSGE DRSSALLCIH 650
HFSSEYFPSY VLHCQGIKTC ELLFNSDDIS FGGSGKGNRL PILCVDHNIP 700
WGIAIELPPL ATLIFQVSF 719
Length:719
Mass (Da):82,861
Last modified:June 1, 2003 - v1
Checksum:iFBBBCEA3264DFD24
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE015925 Genomic DNA. Translation: AAP05019.1.
RefSeqiNP_829141.1. NC_003361.3.
WP_011006237.1. NC_003361.3.

Genome annotation databases

EnsemblBacteriaiAAP05019; AAP05019; CCA_00268.
GeneIDi1217953.
KEGGicca:CCA00268.
PATRICi20269566. VBIChlCav107360_0282.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE015925 Genomic DNA. Translation: AAP05019.1 .
RefSeqi NP_829141.1. NC_003361.3.
WP_011006237.1. NC_003361.3.

3D structure databases

ProteinModelPortali Q823Y5.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 227941.CCA00268.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAP05019 ; AAP05019 ; CCA_00268 .
GeneIDi 1217953.
KEGGi cca:CCA00268.
PATRICi 20269566. VBIChlCav107360_0282.

Phylogenomic databases

eggNOGi COG0296.
KOi K00700.
OMAi ISEGRHE.
OrthoDBi EOG6JX7GT.

Enzyme and pathway databases

UniPathwayi UPA00164 .
BioCyci CCAV227941:GH8L-282-MONOMER.

Family and domain databases

Gene3Di 2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPi MF_00685. GlgB.
InterProi IPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view ]
PIRSFi PIRSF000463. GlgB. 1 hit.
SUPFAMi SSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 2 hits.
TIGRFAMsi TIGR01515. branching_enzym. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Genome sequence of Chlamydophila caviae (Chlamydia psittaci GPIC): examining the role of niche-specific genes in the evolution of the Chlamydiaceae."
    Read T.D., Myers G.S.A., Brunham R.C., Nelson W.C., Paulsen I.T., Heidelberg J.F., Holtzapple E.K., Khouri H.M., Federova N.B., Carty H.A., Umayam L.A., Haft D.H., Peterson J.D., Beanan M.J., White O., Salzberg S.L., Hsia R.-C., McClarty G.
    , Rank R.G., Bavoil P.M., Fraser C.M.
    Nucleic Acids Res. 31:2134-2147(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: GPIC.

Entry informationi

Entry nameiGLGB_CHLCV
AccessioniPrimary (citable) accession number: Q823Y5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 15, 2003
Last sequence update: June 1, 2003
Last modified: September 3, 2014
This is version 83 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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