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Q822Y4 (GCP_CHLCV) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 54. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
Alternative name(s):
t(6)A37 threonylcarbamoyladenosine biosynthesis protein
Gene names
Name:gcp
Ordered Locus Names:CCA_00542
OrganismChlamydophila caviae [Complete proteome] [HAMAP]
Taxonomic identifier83557 [NCBI]
Taxonomic lineageBacteria › Chlamydiae › Chlamydiales › Chlamydiaceae › Chlamydia/Chlamydophila group › Chlamydophila

Protein attributes

Sequence length344 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t6A37) in tRNAs that read codons beginning with adenine By similarity. HAMAP MF_01445

Subcellular location

Cytoplasm Potential HAMAP MF_01445.

Sequence similarities

Belongs to the KAE1 / YgjD family.

Ontologies

Keywords
   Biological processtRNA processing
   Cellular componentCytoplasm
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processproteolysis

Inferred from electronic annotation. Source: InterPro

tRNA processing

Inferred from electronic annotation. Source: UniProtKB-KW

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functionmetalloendopeptidase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 344344Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp HAMAP MF_01445
PRO_0000303320

Sequences

Sequence LengthMass (Da)Tools
Q822Y4 [UniParc].

Last modified June 1, 2003. Version 1.
Checksum: 51C36CDE6B340044

FASTA34436,526
        10         20         30         40         50         60 
MLTLGLESSC DETACALVDA KGHIMANVVF SQQDHVAYGG IVPELASRAH LRVFPSVVDS 

        70         80         90        100        110        120 
ALKESGVSLE DIDLIAVTHT PGLIGSLAIG VNFAKGLAIG CQKPIIGVNH VEAHLYAAYM 

       130        140        150        160        170        180 
EAENVEFPAL GLAVSGAHTA MFLMEDPLTY KLIGKSRDDA IGETFDKVAR FLGLPYPGGS 

       190        200        210        220        230        240 
LIEKLASCGC EESYSFSPSK VPGCDLSFSG LKTAVLYAIK GNNSNSRTPL PELSEAEKSD 

       250        260        270        280        290        300 
IAASFQRAAF TSIAQKLPNI VKKISCRSIL VGGGVASNKY FQNLLKNTLN LPLYFPSSKL 

       310        320        330        340 
CTDNAAMIAG LGRELFLSDK STIGIHPCAR YHWESISASL SPLP

« Hide

References

[1]"Genome sequence of Chlamydophila caviae (Chlamydia psittaci GPIC): examining the role of niche-specific genes in the evolution of the Chlamydiaceae."
Read T.D., Myers G.S.A., Brunham R.C., Nelson W.C., Paulsen I.T., Heidelberg J.F., Holtzapple E.K., Khouri H.M., Federova N.B., Carty H.A., Umayam L.A., Haft D.H., Peterson J.D., Beanan M.J., White O., Salzberg S.L., Hsia R.-C., McClarty G. expand/collapse author list , Rank R.G., Bavoil P.M., Fraser C.M.
Nucleic Acids Res. 31:2134-2147(2003) [PubMed: 12682364] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: GPIC.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AE015925 Genomic DNA. Translation: AAP05285.1.
RefSeqNP_829407.1. NC_003361.3.

3D structure databases

ProteinModelPortalQ822Y4.
ModBaseSearch...

Protein family/group databases

MEROPSM22.001.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID1218227.
GenomeReviewsGene locus CCA_00542 in contig AE015925_GR.
KEGGcca:CCA00542.
PATRIC20270183. VBIChlCav107360_0583.
TIGRCCA_00542.

Phylogenomic databases

HOGENOMHBG304663.
OMAPAVGVHH.
PhylomeDBQ822Y4.
ProtClustDBPRK09604.

Enzyme and pathway databases

BioCycCCAV227941:CCA_00542-MONOMER.

Family and domain databases

HAMAPMF_01445. gcp.
[Tree]
InterProIPR022450. Pept_M22_O-sialoglycopept.
IPR000905. Peptidase_M22.
IPR017861. Peptidase_M22_subgr.
[Graphical view]
KOK01409.
PfamPF00814. Peptidase_M22. 1 hit.
[Graphical view]
PRINTSPR00789. OSIALOPTASE.
TIGRFAMsTIGR03723. Bact_gcp. 1 hit.
TIGR00329. Gcp_kae1. 1 hit.
PROSITEPS01016. GLYCOPROTEASE. False negative.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameGCP_CHLCV
AccessionPrimary (citable) accession number: Q822Y4
Entry history
Integrated into UniProtKB/Swiss-Prot: September 11, 2007
Last sequence update: June 1, 2003
Last modified: January 25, 2012
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

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