Q822I6 (Q822I6_CHLCV) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Transcription antitermination protein nusG RuleBase RU000538

Gene names

Name:	nusG EMBL AAP05438.1
Ordered Locus Names:	CCA_00696

Organism

Chlamydophila caviae [Complete proteome] [HAMAP]

Taxonomic identifier

83557 [NCBI]

Taxonomic lineage

Bacteria › Chlamydiae › Chlamydiales › Chlamydiaceae › Chlamydia/Chlamydophila group › Chlamydophila

Protein attributes

Sequence length	182 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase By similarity. SAAS SAAS006645 RuleBase RU000538
Sequence similarities	Belongs to the nusG family. RuleBase RU003559

Ontologies

Keywords
Biological process	Transcription Transcription antitermination SAAS SAAS006645 RuleBase RU000538 Transcription regulation Transcription termination SAAS SAAS006645 RuleBase RU000538
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	positive regulation of transcription elongation from RNA polymerase II promoter Inferred from electronic annotation. Source: InterPro transcription antitermination Inferred from electronic annotation. Source: UniProtKB-KW transcription termination, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q822I6 [UniParc]. Last modified June 1, 2003. Version 1. Checksum: 056C2C59C95853B4	FASTA	182	20,920
	10 20 30 40 50 60 MFKWYVVQVF TAQEKKVKKA LEDFKESSGM TDFIQEIVLP IENVMEVKKG EHKVVEKFIW 70 80 90 100 110 120 PGYLLIKMHL TDESWLYVKN NPGVVEFLGG GVPLALSEDE VRNILKDIEE KKAGVVQKHK 130 140 150 160 170 180 FDVGSRVKIN DGVFVNFIGV VSEVFHDKGR LSVMVSIFGR ETRVDDLEFW QVEEVAPEQE SE

References

[1]

"Genome sequence of Chlamydophila caviae (Chlamydia psittaci GPIC): examining the role of niche-specific genes in the evolution of the Chlamydiaceae." Read T.D., Myers G.S.A., Brunham R.C., Nelson W.C., Paulsen I.T., Heidelberg J.F., Holtzapple E.K., Khouri H.M., Federova N.B., Carty H.A., Umayam L.A., Haft D.H., Peterson J.D., Beanan M.J., White O., Salzberg S.L., Hsia R.-C., McClarty G. , Rank R.G., Bavoil P.M., Fraser C.M. Nucleic Acids Res. 31:2134-2147(2003) [PubMed: 12682364] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: GPIC.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE015925 Genomic DNA. Translation: AAP05438.1.
RefSeq	NP_829560.1. NC_003361.3.
3D structure databases
HSSP	HSSP built from PDB template 1NPP based on UniProtKB O67757.
ProteinModelPortal	Q822I6.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1218381.
GenomeReviews	Gene locus CCA_00696 in contig AE015925_GR.
KEGG	cca:CCA00696.
PATRIC	20270507. VBIChlCav107360_0740.
TIGR	CCA_00696.
Phylogenomic databases
HOGENOM	HBG751162.
OMA	VASGCEK.
PhylomeDB	Q822I6.
ProtClustDB	PRK05609.
Family and domain databases
InterPro	IPR005824. KOW. IPR001062. Transcrpt_antiterm_NusG. IPR006645. Transcrpt_antiterm_NusG_N. IPR014722. Transl_SH3-like_sub. IPR008991. Translation_prot_SH3-like. [Graphical view]
Gene3D	G3DSA:2.30.30.30. Ribosomal_L2. 1 hit. G3DSA:3.30.70.940. Transcrpt_antiterm_NusG_N. 1 hit.
KO	K02601.
Pfam	PF02357. NusG. 1 hit. [Graphical view]
PRINTS	PR00338. NUSGTNSCPFCT.
SMART	SM00739. KOW. 1 hit. SM00738. NGN. 1 hit. [Graphical view]
SUPFAM	SSF82679. Transcrpt_antiterm_NusG_N. 1 hit. SSF50104. Transl_SH3_like. 1 hit.
TIGRFAMs	TIGR00922. NusG. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q822I6_CHLCV

Accession

Primary (citable) accession number: Q822I6

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 2003
Last sequence update:	June 1, 2003
Last modified:	January 25, 2012
This is version 63 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)