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Protein

Gag polyprotein

Gene

gag

Organism
Human T-lymphotropic virus 1
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
Gag polyproteinSAAS annotation
Gene namesi
Name:gagImported
OrganismiHuman T-lymphotropic virus 1Imported
Taxonomic identifieri11908 [NCBI]
Taxonomic lineageiVirusesRetro-transcribing virusesRetroviridaeOrthoretrovirinaeDeltaretrovirus
Proteomesi
  • UP000158350 Componenti: Genome
  • UP000160168 Componenti: Genome
  • UP000150881 Componenti: Genome
  • UP000109603 Componenti: Genome

Subcellular locationi

  • Virion SAAS annotation

GO - Cellular componenti

Keywords - Cellular componenti

Capsid proteinSAAS annotation, Virion

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini357 – 372CCHC-typeInterPro annotationAdd BLAST16

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Family and domain databases

Gene3Di1.10.1200.30. 1 hit.
1.10.185.10. 1 hit.
1.10.375.10. 1 hit.
4.10.60.10. 3 hits.
InterProiView protein in InterPro
IPR003139. D_retro_matrix.
IPR000721. Gag_p24.
IPR008916. Retrov_capsid_C.
IPR008919. Retrov_capsid_N.
IPR010999. Retrovr_matrix.
IPR001878. Znf_CCHC.
PfamiView protein in Pfam
PF02228. Gag_p19. 1 hit.
PF00607. Gag_p24. 1 hit.
PF00098. zf-CCHC. 1 hit.
SMARTiView protein in SMART
SM00343. ZnF_C2HC. 2 hits.
SUPFAMiSSF47353. SSF47353. 1 hit.
SSF47836. SSF47836. 1 hit.
SSF47943. SSF47943. 1 hit.
SSF57756. SSF57756. 1 hit.
PROSITEiView protein in PROSITE
PS50158. ZF_CCHC. 1 hit.

Sequencei

Sequence statusi: Complete.

Q82230-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGQIFSRSAS PIPRPPRGLA AHHWLNFLQA AYRLEPGPSS YDFHQLKKFL
60 70 80 90 100
KIALETPVWI CPINYSLLAS LLPKGYPGRV NEILHILIQT QAQIPSRPAP
110 120 130 140 150
PPPSSPTHDP PDSDPQIPPP YVEPTAPQVL PVMHPHGAPP NHRPWQMKDL
160 170 180 190 200
QAIKQEVSQA APGSPQFMQT IRLAVQQFDP TAKDLQDLLQ YLCSSLVASL
210 220 230 240 250
HHQQLDSLIS EAETRGITGY NPLAGPLRVQ ANNPQQQGLR REYQQLWLAA
260 270 280 290 300
FAALPGSAKD PSWASILQGL EEPYHAFVER LNIALDNGLP EGTPKDPILR
310 320 330 340 350
SLAYSNANKE CQKLLQARGH TNSPLGDMLR ACQTWTPKDK TKVLVVQPKK
360 370 380 390 400
PPPNQPCFRC GKAGHWSRDC TQPRPPPGPC PLCQDPTHWK RDCPRLKPTI
410 420
PEPEPEEDAL LLDLPADIPH PKNSIGGEV
Length:429
Mass (Da):47,554
Last modified:November 1, 1996 - v1
Checksum:i8BD34F1C75A1D844
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U19949 Genomic DNA. Translation: AAA85841.1.
AF259264 Genomic DNA. Translation: AAF71370.1.
KC807984 Genomic DNA. Translation: AGO81730.1.
KF797815 Genomic DNA. Translation: AHW99847.1.
KF797817 Genomic DNA. Translation: AHW99853.1.
KF797820 Genomic DNA. Translation: AHW99862.1.
KF797821 Genomic DNA. Translation: AHW99865.1.
KF797822 Genomic DNA. Translation: AHW99868.1.
KF797823 Genomic DNA. Translation: AHW99871.1.
KF797829 Genomic DNA. Translation: AHW99889.1.
KF797830 Genomic DNA. Translation: AHW99892.1.
KF797831 Genomic DNA. Translation: AHW99895.1.
KF797832 Genomic DNA. Translation: AHW99898.1.
KF797834 Genomic DNA. Translation: AHW99904.1.
KF797835 Genomic DNA. Translation: AHW99907.1.
KF797839 Genomic DNA. Translation: AHW99919.1.
KF797840 Genomic DNA. Translation: AHW99922.1.
KF797841 Genomic DNA. Translation: AHW99925.1.
KF797842 Genomic DNA. Translation: AHW99928.1.
KF797845 Genomic DNA. Translation: AHW99937.1.
KF797846 Genomic DNA. Translation: AHW99940.1.
KF797849 Genomic DNA. Translation: AHW99950.1.
KF797857 Genomic DNA. Translation: AHW99973.1.
KF797860 Genomic DNA. Translation: AHW99982.1.
KF797863 Genomic DNA. Translation: AHW99991.1.
KF797864 Genomic DNA. Translation: AHW99994.1.
KF797865 Genomic DNA. Translation: AHW99997.1.
KF797867 Genomic DNA. Translation: AHX00004.1.
KF797871 Genomic DNA. Translation: AHX00016.1.
KF797872 Genomic DNA. Translation: AHX00019.1.
KF797873 Genomic DNA. Translation: AHX00022.1.
KF797877 Genomic DNA. Translation: AHX00034.1.
KF797878 Genomic DNA. Translation: AHX00037.1.
KF797880 Genomic DNA. Translation: AHX00043.1.
KF797881 Genomic DNA. Translation: AHX00046.1.
KF797885 Genomic DNA. Translation: AHX00058.1.
KF797886 Genomic DNA. Translation: AHX00061.1.
KF797888 Genomic DNA. Translation: AHX00067.1.
KF797889 Genomic DNA. Translation: AHX00070.1.
KF797890 Genomic DNA. Translation: AHX00073.1.
KF797896 Genomic DNA. Translation: AHX00091.1.
KF797898 Genomic DNA. Translation: AHX00097.1.
KF797911 Genomic DNA. Translation: AHX00126.1.
AB513134 Genomic DNA. Translation: BAH85785.1.
LC192500 Genomic DNA. Translation: BAX34758.1.
LC192503 Genomic DNA. Translation: BAX34785.1.
LC192504 Genomic DNA. Translation: BAX34794.1.
LC192505 Genomic DNA. Translation: BAX34803.1.
LC192508 Genomic DNA. Translation: BAX34830.1.
LC192509 Genomic DNA. Translation: BAX34839.1.
LC192510 Genomic DNA. Translation: BAX34848.1.
LC192511 Genomic DNA. Translation: BAX34857.1.
LC192512 Genomic DNA. Translation: BAX34866.1.
LC192513 Genomic DNA. Translation: BAX34875.1.
LC192517 Genomic DNA. Translation: BAX34911.1.
LC192518 Genomic DNA. Translation: BAX34920.1.
LC192520 Genomic DNA. Translation: BAX34938.1.
LC192523 Genomic DNA. Translation: BAX34965.1.
LC192524 Genomic DNA. Translation: BAX34974.1.
LC192528 Genomic DNA. Translation: BAX35010.1.
LC192531 Genomic DNA. Translation: BAX35037.1.
LC192532 Genomic DNA. Translation: BAX35046.1.
LC192533 Genomic DNA. Translation: BAX35055.1.
LC192535 Genomic DNA. Translation: BAX35073.1.
LC192536 Genomic DNA. Translation: BAX35082.1.
LC185237 Genomic DNA. Translation: BAX76704.1.
LC192257 Genomic DNA. Translation: BAX76776.1.
LC192258 Genomic DNA. Translation: BAX76784.1.
LC192260 Genomic DNA. Translation: BAX76800.1.
LC192262 Genomic DNA. Translation: BAX76816.1.
LC209958 Genomic DNA. Translation: BAX76879.1.
LC209959 Genomic DNA. Translation: BAX76887.1.
LC209960 Genomic DNA. Translation: BAX76895.1.
LC209967 Genomic DNA. Translation: BAX76951.1.
LC209969 Genomic DNA. Translation: BAX76967.1.
LC209971 Genomic DNA. Translation: BAX76983.1.
LC209973 Genomic DNA. Translation: BAX76999.1.
LC209979 Genomic DNA. Translation: BAX77047.1.
LC209982 Genomic DNA. Translation: BAX77071.1.
LC209985 Genomic DNA. Translation: BAX77095.1.
LC209990 Genomic DNA. Translation: BAX77135.1.
LC209991 Genomic DNA. Translation: BAX77143.1.
LC209994 Genomic DNA. Translation: BAX77167.1.
LC209997 Genomic DNA. Translation: BAX77191.1.
LC209999 Genomic DNA. Translation: BAX77207.1.
LC210001 Genomic DNA. Translation: BAX77223.1.
LC210007 Genomic DNA. Translation: BAX77271.1.
LC210009 Genomic DNA. Translation: BAX77287.1.
LC210010 Genomic DNA. Translation: BAX77295.1.
LC210011 Genomic DNA. Translation: BAX77303.1.
LC210013 Genomic DNA. Translation: BAX77319.1.
LC210015 Genomic DNA. Translation: BAX77335.1.
LC210018 Genomic DNA. Translation: BAX77359.1.
LC210019 Genomic DNA. Translation: BAX77367.1.
LC210022 Genomic DNA. Translation: BAX77391.1.
LC210024 Genomic DNA. Translation: BAX77407.1.
LC210030 Genomic DNA. Translation: BAX77455.1.
LC210032 Genomic DNA. Translation: BAX77471.1.
LC210034 Genomic DNA. Translation: BAX77487.1.
LC210035 Genomic DNA. Translation: BAX77495.1.
LC210036 Genomic DNA. Translation: BAX77503.1.
LC210039 Genomic DNA. Translation: BAX77527.1.
LC210042 Genomic DNA. Translation: BAX77551.1.
LC210043 Genomic DNA. Translation: BAX77558.1.
LC210048 Genomic DNA. Translation: BAX77598.1.
LC210049 Genomic DNA. Translation: BAX77606.1.
LC210050 Genomic DNA. Translation: BAX77614.1.
LC210052 Genomic DNA. Translation: BAX77630.1.
LC210055 Genomic DNA. Translation: BAX77654.1.
LC210063 Genomic DNA. Translation: BAX77718.1.
LC210064 Genomic DNA. Translation: BAX77726.1.
LC210067 Genomic DNA. Translation: BAX77750.1.
LC210071 Genomic DNA. Translation: BAX77781.1.

Similar proteinsi

Entry informationi

Entry nameiQ82230_9DELA
AccessioniPrimary (citable) accession number: Q82230
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: August 30, 2017
This is version 101 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported