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Protein

Gag polyprotein

Gene

gag

Organism
Human T-lymphotropic virus 1
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
Gag polyproteinSAAS annotation
Gene namesi
Name:gagImported
Synonyms:GagImported
OrganismiHuman T-lymphotropic virus 1Imported
Taxonomic identifieri11908 [NCBI]
Taxonomic lineageiVirusesOrterviralesRetroviridaeOrthoretrovirinaeDeltaretrovirus
Proteomesi
  • UP000158350 Componenti: Genome
  • UP000160168 Componenti: Genome
  • UP000150881 Componenti: Genome
  • UP000109603 Componenti: Genome

Subcellular locationi

  • Virion SAAS annotation

GO - Cellular componenti

Keywords - Cellular componenti

Capsid proteinSAAS annotation, Virion

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini357 – 372CCHC-typeInterPro annotationAdd BLAST16

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Family and domain databases

Gene3Di1.10.1200.30, 1 hit
1.10.185.10, 1 hit
1.10.375.10, 1 hit
InterProiView protein in InterPro
IPR003139 D_retro_matrix
IPR036989 D_retro_matrix_sf
IPR000721 Gag_p24
IPR008916 Retrov_capsid_C
IPR008919 Retrov_capsid_N
IPR010999 Retrovr_matrix
IPR001878 Znf_CCHC
IPR036875 Znf_CCHC_sf
PfamiView protein in Pfam
PF02228 Gag_p19, 1 hit
PF00607 Gag_p24, 1 hit
PF00098 zf-CCHC, 1 hit
SMARTiView protein in SMART
SM00343 ZnF_C2HC, 2 hits
SUPFAMiSSF47836 SSF47836, 1 hit
SSF47943 SSF47943, 1 hit
SSF57756 SSF57756, 1 hit
PROSITEiView protein in PROSITE
PS50158 ZF_CCHC, 1 hit

Sequencei

Sequence statusi: Complete.

Q82230-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGQIFSRSAS PIPRPPRGLA AHHWLNFLQA AYRLEPGPSS YDFHQLKKFL
60 70 80 90 100
KIALETPVWI CPINYSLLAS LLPKGYPGRV NEILHILIQT QAQIPSRPAP
110 120 130 140 150
PPPSSPTHDP PDSDPQIPPP YVEPTAPQVL PVMHPHGAPP NHRPWQMKDL
160 170 180 190 200
QAIKQEVSQA APGSPQFMQT IRLAVQQFDP TAKDLQDLLQ YLCSSLVASL
210 220 230 240 250
HHQQLDSLIS EAETRGITGY NPLAGPLRVQ ANNPQQQGLR REYQQLWLAA
260 270 280 290 300
FAALPGSAKD PSWASILQGL EEPYHAFVER LNIALDNGLP EGTPKDPILR
310 320 330 340 350
SLAYSNANKE CQKLLQARGH TNSPLGDMLR ACQTWTPKDK TKVLVVQPKK
360 370 380 390 400
PPPNQPCFRC GKAGHWSRDC TQPRPPPGPC PLCQDPTHWK RDCPRLKPTI
410 420
PEPEPEEDAL LLDLPADIPH PKNSIGGEV
Length:429
Mass (Da):47,554
Last modified:November 1, 1996 - v1
Checksum:i8BD34F1C75A1D844
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U19949 Genomic DNA Translation: AAA85841.1
AF259264 Genomic DNA Translation: AAF71370.1
KC807984 Genomic DNA Translation: AGO81730.1
KF797815 Genomic DNA Translation: AHW99847.1
KF797817 Genomic DNA Translation: AHW99853.1
KF797820 Genomic DNA Translation: AHW99862.1
KF797821 Genomic DNA Translation: AHW99865.1
KF797822 Genomic DNA Translation: AHW99868.1
KF797823 Genomic DNA Translation: AHW99871.1
KF797829 Genomic DNA Translation: AHW99889.1
KF797830 Genomic DNA Translation: AHW99892.1
KF797831 Genomic DNA Translation: AHW99895.1
KF797832 Genomic DNA Translation: AHW99898.1
KF797834 Genomic DNA Translation: AHW99904.1
KF797835 Genomic DNA Translation: AHW99907.1
KF797839 Genomic DNA Translation: AHW99919.1
KF797840 Genomic DNA Translation: AHW99922.1
KF797841 Genomic DNA Translation: AHW99925.1
KF797842 Genomic DNA Translation: AHW99928.1
KF797845 Genomic DNA Translation: AHW99937.1
KF797846 Genomic DNA Translation: AHW99940.1
KF797849 Genomic DNA Translation: AHW99950.1
KF797857 Genomic DNA Translation: AHW99973.1
KF797860 Genomic DNA Translation: AHW99982.1
KF797863 Genomic DNA Translation: AHW99991.1
KF797864 Genomic DNA Translation: AHW99994.1
KF797865 Genomic DNA Translation: AHW99997.1
KF797867 Genomic DNA Translation: AHX00004.1
KF797871 Genomic DNA Translation: AHX00016.1
KF797872 Genomic DNA Translation: AHX00019.1
KF797873 Genomic DNA Translation: AHX00022.1
KF797877 Genomic DNA Translation: AHX00034.1
KF797878 Genomic DNA Translation: AHX00037.1
KF797880 Genomic DNA Translation: AHX00043.1
KF797881 Genomic DNA Translation: AHX00046.1
KF797885 Genomic DNA Translation: AHX00058.1
KF797886 Genomic DNA Translation: AHX00061.1
KF797888 Genomic DNA Translation: AHX00067.1
KF797889 Genomic DNA Translation: AHX00070.1
KF797890 Genomic DNA Translation: AHX00073.1
KF797896 Genomic DNA Translation: AHX00091.1
KF797898 Genomic DNA Translation: AHX00097.1
KF797911 Genomic DNA Translation: AHX00126.1
AB513134 Genomic DNA Translation: BAH85785.1
LC192500 Genomic DNA Translation: BAX34758.1
LC192503 Genomic DNA Translation: BAX34785.1
LC192504 Genomic DNA Translation: BAX34794.1
LC192505 Genomic DNA Translation: BAX34803.1
LC192508 Genomic DNA Translation: BAX34830.1
LC192509 Genomic DNA Translation: BAX34839.1
LC192510 Genomic DNA Translation: BAX34848.1
LC192511 Genomic DNA Translation: BAX34857.1
LC192512 Genomic DNA Translation: BAX34866.1
LC192513 Genomic DNA Translation: BAX34875.1
LC192517 Genomic DNA Translation: BAX34911.1
LC192518 Genomic DNA Translation: BAX34920.1
LC192520 Genomic DNA Translation: BAX34938.1
LC192523 Genomic DNA Translation: BAX34965.1
LC192524 Genomic DNA Translation: BAX34974.1
LC192528 Genomic DNA Translation: BAX35010.1
LC192531 Genomic DNA Translation: BAX35037.1
LC192532 Genomic DNA Translation: BAX35046.1
LC192533 Genomic DNA Translation: BAX35055.1
LC192535 Genomic DNA Translation: BAX35073.1
LC192536 Genomic DNA Translation: BAX35082.1
LC185237 Genomic DNA Translation: BAX76704.1
LC192257 Genomic DNA Translation: BAX76776.1
LC192258 Genomic DNA Translation: BAX76784.1
LC192260 Genomic DNA Translation: BAX76800.1
LC192262 Genomic DNA Translation: BAX76816.1
LC209958 Genomic DNA Translation: BAX76879.1
LC209959 Genomic DNA Translation: BAX76887.1
LC209960 Genomic DNA Translation: BAX76895.1
LC209967 Genomic DNA Translation: BAX76951.1
LC209969 Genomic DNA Translation: BAX76967.1
LC209971 Genomic DNA Translation: BAX76983.1
LC209973 Genomic DNA Translation: BAX76999.1
LC209979 Genomic DNA Translation: BAX77047.1
LC209982 Genomic DNA Translation: BAX77071.1
LC209985 Genomic DNA Translation: BAX77095.1
LC209990 Genomic DNA Translation: BAX77135.1
LC209991 Genomic DNA Translation: BAX77143.1
LC209994 Genomic DNA Translation: BAX77167.1
LC209997 Genomic DNA Translation: BAX77191.1
LC209999 Genomic DNA Translation: BAX77207.1
LC210001 Genomic DNA Translation: BAX77223.1
LC210007 Genomic DNA Translation: BAX77271.1
LC210009 Genomic DNA Translation: BAX77287.1
LC210010 Genomic DNA Translation: BAX77295.1
LC210011 Genomic DNA Translation: BAX77303.1
LC210013 Genomic DNA Translation: BAX77319.1
LC210015 Genomic DNA Translation: BAX77335.1
LC210018 Genomic DNA Translation: BAX77359.1
LC210019 Genomic DNA Translation: BAX77367.1
LC210022 Genomic DNA Translation: BAX77391.1
LC210024 Genomic DNA Translation: BAX77407.1
LC210030 Genomic DNA Translation: BAX77455.1
LC210032 Genomic DNA Translation: BAX77471.1
LC210034 Genomic DNA Translation: BAX77487.1
LC210035 Genomic DNA Translation: BAX77495.1
LC210036 Genomic DNA Translation: BAX77503.1
LC210039 Genomic DNA Translation: BAX77527.1
LC210042 Genomic DNA Translation: BAX77551.1
LC210043 Genomic DNA Translation: BAX77558.1
LC210048 Genomic DNA Translation: BAX77598.1
LC210049 Genomic DNA Translation: BAX77606.1
LC210050 Genomic DNA Translation: BAX77614.1
LC210052 Genomic DNA Translation: BAX77630.1
LC210055 Genomic DNA Translation: BAX77654.1
LC210063 Genomic DNA Translation: BAX77718.1
LC210064 Genomic DNA Translation: BAX77726.1
LC210067 Genomic DNA Translation: BAX77750.1
LC210071 Genomic DNA Translation: BAX77781.1
LC183873 Genomic DNA Translation: BBA30571.1
LC183874 Genomic DNA Translation: BBA30578.1

Similar proteinsi

Entry informationi

Entry nameiQ82230_9DELA
AccessioniPrimary (citable) accession number: Q82230
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: June 20, 2018
This is version 107 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

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