ID POLG_HRV16 Reviewed; 2153 AA. AC Q82122; DT 15-JUL-1998, integrated into UniProtKB/Swiss-Prot. DT 23-JAN-2007, sequence version 4. DT 24-JAN-2024, entry version 194. DE RecName: Full=Genome polyprotein; DE Contains: DE RecName: Full=P1; DE Contains: DE RecName: Full=Capsid protein VP0; DE AltName: Full=VP4-VP2; DE Contains: DE RecName: Full=Capsid protein VP4; DE AltName: Full=P1A; DE AltName: Full=Virion protein 4; DE Contains: DE RecName: Full=Capsid protein VP2; DE AltName: Full=P1B; DE AltName: Full=Virion protein 2; DE Contains: DE RecName: Full=Capsid protein VP3; DE AltName: Full=P1C; DE AltName: Full=Virion protein 3; DE Contains: DE RecName: Full=Capsid protein VP1; DE AltName: Full=P1D; DE AltName: Full=Virion protein 1; DE Contains: DE RecName: Full=P2; DE Contains: DE RecName: Full=Protease 2A; DE Short=P2A; DE EC=3.4.22.29 {ECO:0000250|UniProtKB:P03300}; DE AltName: Full=Picornain 2A; DE AltName: Full=Protein 2A; DE Contains: DE RecName: Full=Protein 2B; DE Short=P2B; DE Contains: DE RecName: Full=Protein 2C; DE Short=P2C; DE EC=3.6.1.15 {ECO:0000250|UniProtKB:P03300}; DE Contains: DE RecName: Full=P3; DE Contains: DE RecName: Full=Protein 3AB; DE Contains: DE RecName: Full=Protein 3A; DE Short=P3A; DE Contains: DE RecName: Full=Viral protein genome-linked; DE Short=VPg; DE AltName: Full=Protein 3B; DE Short=P3B; DE Contains: DE RecName: Full=Protein 3CD; DE EC=3.4.22.28; DE Contains: DE RecName: Full=Protease 3C {ECO:0000255|PROSITE-ProRule:PRU01222}; DE EC=3.4.22.28 {ECO:0000255|PROSITE-ProRule:PRU01222}; DE AltName: Full=Picornain 3C {ECO:0000255|PROSITE-ProRule:PRU01222}; DE Short=P3C {ECO:0000255|PROSITE-ProRule:PRU01222}; DE Contains: DE RecName: Full=RNA-directed RNA polymerase {ECO:0000255|PROSITE-ProRule:PRU00539}; DE Short=RdRp; DE EC=2.7.7.48 {ECO:0000255|PROSITE-ProRule:PRU00539}; DE AltName: Full=3D polymerase; DE Short=3Dpol; DE AltName: Full=Protein 3D; DE Short=3D; OS Human rhinovirus 16 (HRV-16). OC Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; OC Picornavirales; Picornaviridae; Ensavirinae; Enterovirus; Rhinovirus A. OX NCBI_TaxID=31708; OH NCBI_TaxID=9606; Homo sapiens (Human). RN [1] RP NUCLEOTIDE SEQUENCE [GENOMIC RNA]. RX PubMed=7732663; DOI=10.1007/bf01702661; RA Lee W.M., Wang W., Rueckert R.R.; RT "Complete sequence of the RNA genome of human rhinovirus 16, a clinically RT useful common cold virus belonging to the ICAM-1 receptor group."; RL Virus Genes 9:177-181(1995). RN [2] RP FUNCTION (PROTEASE 3C). RX PubMed=19403669; DOI=10.1128/jvi.01748-08; RA Ghildyal R., Jordan B., Li D., Dagher H., Bardin P.G., Gern J.E., RA Jans D.A.; RT "Rhinovirus 3C protease can localize in the nucleus and alter active and RT passive nucleocytoplasmic transport."; RL J. Virol. 83:7349-7352(2009). RN [3] RP REVIEW. RX PubMed=23227049; DOI=10.1155/2012/826301; RA Fuchs R., Blaas D.; RT "Productive entry pathways of human rhinoviruses."; RL Adv. Virol. 2012:826301-826301(2012). RN [4] RP FUNCTION (PROTEASE 3C). RX PubMed=33093214; DOI=10.1126/science.aay2002; RA Robinson K.S., Teo D.E.T., Tan K.S., Toh G.A., Ong H.H., Lim C.K., Lay K., RA Au B.V., Lew T.S., Chu J.J.H., Chow V.T.K., Wang Y., Zhong F.L., RA Reversade B.; RT "Enteroviral 3C protease activates the human NLRP1 inflammasome in airway RT epithelia."; RL Science 0:0-0(2020). RN [5] RP X-RAY CRYSTALLOGRAPHY (3.5 ANGSTROMS) OF 1-853. RX PubMed=7915182; DOI=10.1016/0969-2126(93)90008-5; RA Oliveira M.A., Zhao R., Lee W.M., Kremer M.J., Minor I., Rueckert R.R., RA Diana G.D., Pevear D.C., Dutko F.J., McKinlay M.A., Rossmann M.G.; RT "The structure of human rhinovirus 16."; RL Structure 1:51-68(1993). RN [6] RP X-RAY CRYSTALLOGRAPHY (2.15 ANGSTROMS) OF 1-853, AND SEQUENCE REVISION TO RP 547-548. RX PubMed=9083115; DOI=10.1016/s0969-2126(97)00199-8; RA Hadfield A.T., Lee W.M., Zhao R., Oliveira M.A., Minor I., Rueckert R.R., RA Rossmann M.G.; RT "The refined structure of human rhinovirus 16 at 2.15-A resolution: RT implications for the viral life cycle."; RL Structure 5:427-441(1997). CC -!- FUNCTION: [Capsid protein VP1]: Forms an icosahedral capsid of pseudo CC T=3 symmetry with capsid proteins VP2 and VP3 (By similarity). The CC capsid is 300 Angstroms in diameter, composed of 60 copies of each CC capsid protein and enclosing the viral positive strand RNA genome (By CC similarity). Capsid protein VP1 mainly forms the vertices of the capsid CC (By similarity). Capsid protein VP1 interacts with host cell receptor CC to provide virion attachment to target host cells (By similarity). This CC attachment induces virion internalization (By similarity). Tyrosine CC kinases are probably involved in the entry process (By similarity). CC After binding to its receptor, the capsid undergoes conformational CC changes (By similarity). Capsid protein VP1 N-terminus (that contains CC an amphipathic alpha-helix) and capsid protein VP4 are externalized (By CC similarity). Together, they shape a pore in the host membrane through CC which viral genome is translocated to host cell cytoplasm (By CC similarity). {ECO:0000250|UniProtKB:P03300}. CC -!- FUNCTION: [Capsid protein VP2]: Forms an icosahedral capsid of pseudo CC T=3 symmetry with capsid proteins VP2 and VP3 (By similarity). The CC capsid is 300 Angstroms in diameter, composed of 60 copies of each CC capsid protein and enclosing the viral positive strand RNA genome (By CC similarity). {ECO:0000250|UniProtKB:P03300}. CC -!- FUNCTION: [Capsid protein VP3]: Forms an icosahedral capsid of pseudo CC T=3 symmetry with capsid proteins VP2 and VP3 (By similarity). The CC capsid is 300 Angstroms in diameter, composed of 60 copies of each CC capsid protein and enclosing the viral positive strand RNA genome (By CC similarity). {ECO:0000250|UniProtKB:P03300}. CC -!- FUNCTION: [Capsid protein VP4]: Lies on the inner surface of the capsid CC shell (By similarity). After binding to the host receptor, the capsid CC undergoes conformational changes (By similarity). Capsid protein VP4 is CC released, Capsid protein VP1 N-terminus is externalized, and together, CC they shape a pore in the host membrane through which the viral genome CC is translocated into the host cell cytoplasm (By similarity). CC {ECO:0000250|UniProtKB:P03300}. CC -!- FUNCTION: [Capsid protein VP0]: Component of immature procapsids, which CC is cleaved into capsid proteins VP4 and VP2 after maturation (By CC similarity). Allows the capsid to remain inactive before the maturation CC step (By similarity). {ECO:0000250|UniProtKB:P03300}. CC -!- FUNCTION: [Protease 2A]: Cysteine protease that cleaves viral CC polyprotein and specific host proteins (By similarity). It is CC responsible for the autocatalytic cleavage between the P1 and P2 CC regions, which is the first cleavage occurring in the polyprotein (By CC similarity). Cleaves also the host translation initiation factor CC EIF4G1, in order to shut down the capped cellular mRNA translation (By CC similarity). Inhibits the host nucleus-cytoplasm protein and RNA CC trafficking by cleaving host members of the nuclear pores (By CC similarity). Counteracts stress granule formation probably by CC antagonizing its assembly or promoting its dissassembly (By CC similarity). {ECO:0000250|UniProtKB:P03300, CC ECO:0000250|UniProtKB:P03301, ECO:0000250|UniProtKB:P04936}. CC -!- FUNCTION: [Protein 2B]: Plays an essential role in the virus CC replication cycle by acting as a viroporin. Creates a pore in the host CC reticulum endoplasmic and as a consequence releases Ca2+ in the CC cytoplasm of infected cell. In turn, high levels of cytoplasmic calcium CC may trigger membrane trafficking and transport of viral ER-associated CC proteins to viroplasms, sites of viral genome replication. CC {ECO:0000250|UniProtKB:P03300}. CC -!- FUNCTION: [Protein 2C]: Induces and associates with structural CC rearrangements of intracellular membranes. Displays RNA-binding, CC nucleotide binding and NTPase activities. May play a role in virion CC morphogenesis and viral RNA encapsidation by interacting with the CC capsid protein VP3. {ECO:0000250|UniProtKB:P03300}. CC -!- FUNCTION: [Protein 3A]: Localizes the viral replication complex to the CC surface of membranous vesicles (By similarity). It inhibits host cell CC endoplasmic reticulum-to-Golgi apparatus transport and causes the CC disassembly of the Golgi complex, possibly through GBF1 interaction (By CC similarity). This would result in depletion of MHC, trail receptors and CC IFN receptors at the host cell surface (By similarity). Plays an CC essential role in viral RNA replication by recruiting ACBD3 and PI4KB CC at the viral replication sites, thereby allowing the formation of the CC rearranged membranous structures where viral replication takes place CC (By similarity). {ECO:0000250|UniProtKB:P03300, CC ECO:0000250|UniProtKB:P04936}. CC -!- FUNCTION: [Viral protein genome-linked]: Acts as a primer for viral RNA CC replication and remains covalently bound to viral genomic RNA. VPg is CC uridylylated prior to priming replication into VPg-pUpU (By CC similarity). The oriI viral genomic sequence may act as a template for CC this. The VPg-pUpU is then used as primer on the genomic RNA poly(A) by CC the RNA-dependent RNA polymerase to replicate the viral genome (By CC similarity). Following genome release from the infecting virion in the CC cytoplasm, the VPg-RNA linkage is probably removed by host TDP2 (By CC similarity). During the late stage of the replication cycle, host TDP2 CC is excluded from sites of viral RNA synthesis and encapsidation, CC allowing for the generation of progeny virions (By similarity). CC {ECO:0000250|UniProtKB:P03300}. CC -!- FUNCTION: [Protein 3CD]: Involved in the viral replication complex and CC viral polypeptide maturation. It exhibits protease activity with a CC specificity and catalytic efficiency that is different from protease CC 3C. Protein 3CD lacks polymerase activity. Protein 3CD binds to the CC 5'UTR of the viral genome. {ECO:0000250|UniProtKB:P03300}. CC -!- FUNCTION: [Protease 3C]: Major viral protease that mediates proteolytic CC processing of the polyprotein (By similarity). Cleaves host EIF5B, CC contributing to host translation shutoff (By similarity). Cleaves also CC host PABPC1, contributing to host translation shutoff (By similarity). CC Cleaves host NLRP1, triggers host N-glycine-mediated degradation of the CC autoinhibitory NLRP1 N-terminal fragment (PubMed:33093214). CC {ECO:0000250|UniProtKB:P03300, ECO:0000250|UniProtKB:P03313, CC ECO:0000269|PubMed:33093214}. CC -!- FUNCTION: [RNA-directed RNA polymerase]: Replicates the viral genomic CC RNA on the surface of intracellular membranes. May form linear arrays CC of subunits that propagate along a strong head-to-tail interaction CC called interface-I. Covalently attaches UMP to a tyrosine of VPg, which CC is used to prime RNA synthesis. The positive stranded RNA genome is CC first replicated at virus induced membranous vesicles, creating a dsRNA CC genomic replication form. This dsRNA is then used as template to CC synthesize positive stranded RNA genomes. ss(+)RNA genomes are either CC translated, replicated or encapsidated. {ECO:0000250|UniProtKB:P03300}. CC -!- CATALYTIC ACTIVITY: [Protein 2C]: CC Reaction=a ribonucleoside 5'-triphosphate + H2O = a ribonucleoside 5'- CC diphosphate + H(+) + phosphate; Xref=Rhea:RHEA:23680, CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:43474, CC ChEBI:CHEBI:57930, ChEBI:CHEBI:61557; EC=3.6.1.15; CC Evidence={ECO:0000250|UniProtKB:P03300}; CC -!- CATALYTIC ACTIVITY: [Protease 2A]: CC Reaction=Selective cleavage of Tyr-|-Gly bond in the picornavirus CC polyprotein.; EC=3.4.22.29; Evidence={ECO:0000250|UniProtKB:P03300}; CC -!- CATALYTIC ACTIVITY: [RNA-directed RNA polymerase]: CC Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate + CC RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA- CC COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395; CC EC=2.7.7.48; Evidence={ECO:0000255|PROSITE-ProRule:PRU00539}; CC -!- CATALYTIC ACTIVITY: [Protease 3C]: CC Reaction=Selective cleavage of Gln-|-Gly bond in the poliovirus CC polyprotein. In other picornavirus reactions Glu may be substituted CC for Gln, and Ser or Thr for Gly.; EC=3.4.22.28; CC Evidence={ECO:0000255|PROSITE-ProRule:PRU01222}; CC -!- COFACTOR: [RNA-directed RNA polymerase]: CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420; CC Evidence={ECO:0000250|UniProtKB:P03300}; CC Note=Binds 2 magnesium ions that constitute a dinuclear catalytic metal CC center (By similarity). The magnesium ions are not prebound but only CC present for catalysis (By similarity). Requires the presence of 3CDpro CC or 3CPro (By similarity). {ECO:0000250|UniProtKB:P03300, CC ECO:0000250|UniProtKB:P03313}; CC -!- ACTIVITY REGULATION: [RNA-directed RNA polymerase]: Replication or CC transcription is subject to high level of random mutations by the CC nucleotide analog ribavirin. {ECO:0000250|UniProtKB:P03300}. CC -!- SUBUNIT: [Capsid protein VP0]: Interacts with capsid protein VP1 and CC capsid protein VP3 to form heterotrimeric protomers. CC {ECO:0000250|UniProtKB:P03300}. CC -!- SUBUNIT: [Capsid protein VP1]: Interacts with capsid protein VP0, and CC capsid protein VP3 to form heterotrimeric protomers (By similarity). CC Five protomers subsequently associate to form pentamers which serve as CC building blocks for the capsid (By similarity). Interacts with capsid CC protein VP2, capsid protein VP3 and capsid protein VP4 following CC cleavage of capsid protein VP0 (By similarity). CC {ECO:0000250|UniProtKB:P03300}. CC -!- SUBUNIT: [Capsid protein VP2]: Interacts with capsid protein VP1 and CC capsid protein VP3 in the mature capsid. CC {ECO:0000250|UniProtKB:P03300}. CC -!- SUBUNIT: [Capsid protein VP3]: Interacts with capsid protein VP0 and CC capsid protein VP1 to form heterotrimeric protomers (By similarity). CC Five protomers subsequently associate to form pentamers which serve as CC building blocks for the capsid (By similarity). Interacts with capsid CC protein VP4 in the mature capsid (By similarity). Interacts with CC protein 2C; this interaction may be important for virion morphogenesis CC (By similarity). {ECO:0000250|UniProtKB:P03300}. CC -!- SUBUNIT: [Capsid protein VP4]: Interacts with capsid protein VP1 and CC capsid protein VP3. {ECO:0000250|UniProtKB:P03300}. CC -!- SUBUNIT: [Protease 2A]: Homodimer. {ECO:0000250|UniProtKB:P04936}. CC -!- SUBUNIT: [Protein 2C]: Homohexamer; forms a hexameric ring structure CC with 6-fold symmetry characteristic of AAA+ ATPases (By similarity). CC Interacts (via N-terminus) with host RTN3 (via reticulon domain); this CC interaction is important for viral replication (By similarity). CC Interacts with capsid protein VP3; this interaction may be important CC for virion morphogenesis (By similarity). CC {ECO:0000250|UniProtKB:P03300}. CC -!- SUBUNIT: [Protein 3AB]: Interacts with protein 3CD. CC {ECO:0000250|UniProtKB:P03300}. CC -!- SUBUNIT: [Protein 3A]: Homodimer (By similarity). Interacts with host CC GBF1 (By similarity). Interacts (via GOLD domain) with host ACBD3 (via CC GOLD domain); this interaction allows the formation of a viral protein CC 3A/ACBD3 heterotetramer with a 2:2 stoichiometry, which will stimulate CC the recruitment of host PI4KB in order to synthesize PI4P at the viral CC RNA replication sites (By similarity). {ECO:0000250|UniProtKB:P03300}. CC -!- SUBUNIT: [Viral protein genome-linked]: Interacts with RNA-directed RNA CC polymerase. {ECO:0000250|UniProtKB:P03300}. CC -!- SUBUNIT: [Protein 3CD]: Interacts with protein 3AB and with RNA- CC directed RNA polymerase. {ECO:0000250|UniProtKB:P03300}. CC -!- SUBUNIT: [RNA-directed RNA polymerase]: Interacts with Viral protein CC genome-linked and with protein 3CD. {ECO:0000250|UniProtKB:P03300}. CC -!- SUBCELLULAR LOCATION: [Capsid protein VP0]: Virion. Host cytoplasm CC {ECO:0000305}. CC -!- SUBCELLULAR LOCATION: [Capsid protein VP4]: Virion. CC -!- SUBCELLULAR LOCATION: [Capsid protein VP2]: Virion CC {ECO:0000250|UniProtKB:P03300}. Host cytoplasm {ECO:0000305}. CC -!- SUBCELLULAR LOCATION: [Capsid protein VP3]: Virion CC {ECO:0000250|UniProtKB:P03300}. Host cytoplasm {ECO:0000305}. CC -!- SUBCELLULAR LOCATION: [Capsid protein VP1]: Virion CC {ECO:0000250|UniProtKB:P03300}. Host cytoplasm {ECO:0000305}. CC -!- SUBCELLULAR LOCATION: [Protein 2B]: Host cytoplasmic vesicle membrane CC {ECO:0000305}; Peripheral membrane protein {ECO:0000305}; Cytoplasmic CC side {ECO:0000305}. Note=Probably localizes to the surface of CC intracellular membrane vesicles that are induced after virus infection CC as the site for viral RNA replication. These vesicles are derived from CC the endoplasmic reticulum. CC -!- SUBCELLULAR LOCATION: [Protein 2C]: Host cytoplasmic vesicle membrane CC {ECO:0000305}; Peripheral membrane protein {ECO:0000305}; Cytoplasmic CC side {ECO:0000305}. Note=Probably localizes to the surface of CC intracellular membrane vesicles that are induced after virus infection CC as the site for viral RNA replication. These vesicles are derived from CC the endoplasmic reticulum. CC -!- SUBCELLULAR LOCATION: [Protein 3A]: Host cytoplasmic vesicle membrane CC {ECO:0000305}; Peripheral membrane protein {ECO:0000305}; Cytoplasmic CC side {ECO:0000305}. Note=Probably localizes to the surface of CC intracellular membrane vesicles that are induced after virus infection CC as the site for viral RNA replication. These vesicles are derived from CC the endoplasmic reticulum. CC -!- SUBCELLULAR LOCATION: [Protein 3AB]: Host cytoplasmic vesicle membrane CC {ECO:0000305}; Peripheral membrane protein {ECO:0000305}; Cytoplasmic CC side {ECO:0000305}. Note=Probably localizes to the surface of CC intracellular membrane vesicles that are induced after virus infection CC as the site for viral RNA replication. These vesicles are derived from CC the endoplasmic reticulum. CC -!- SUBCELLULAR LOCATION: [Viral protein genome-linked]: Virion CC {ECO:0000250|UniProtKB:P03300}. Host cytoplasm CC {ECO:0000250|UniProtKB:Q66478}. CC -!- SUBCELLULAR LOCATION: [Protease 3C]: Host cytoplasm. CC -!- SUBCELLULAR LOCATION: [Protein 3CD]: Host nucleus CC {ECO:0000250|UniProtKB:P03300}. Host cytoplasm CC {ECO:0000250|UniProtKB:P03300}. Host cytoplasmic vesicle membrane CC {ECO:0000305}; Peripheral membrane protein {ECO:0000305}; Cytoplasmic CC side {ECO:0000305}. Note=Probably localizes to the surface of CC intracellular membrane vesicles that are induced after virus infection CC as the site for viral RNA replication. These vesicles are derived from CC the endoplasmic reticulum. CC -!- SUBCELLULAR LOCATION: [RNA-directed RNA polymerase]: Host cytoplasmic CC vesicle membrane {ECO:0000305}; Peripheral membrane protein CC {ECO:0000305}; Cytoplasmic side {ECO:0000305}. Note=Probably localizes CC to the surface of intracellular membrane vesicles that are induced CC after virus infection as the site for viral RNA replication. These CC vesicles are derived from the endoplasmic reticulum. CC -!- DOMAIN: [Protein 2C]: The N-terminus has membrane-binding (By CC similarity). The N-terminus also displays RNA-binding properties (By CC similarity). The N-terminus is involved in oligomerization (By CC similarity). The central part contains an ATPase domain and a CC degenerate C4-type zinc-finger with only 3 cysteines (By similarity). CC The C-terminus is involved in RNA-binding (By similarity). The extreme CC C-terminus contains a region involved in oligomerization (By CC similarity). {ECO:0000250|UniProtKB:B9VUU3, CC ECO:0000250|UniProtKB:P03300}. CC -!- PTM: [Genome polyprotein]: Specific enzymatic cleavages in vivo by the CC viral proteases yield processing intermediates and the mature proteins. CC {ECO:0000250|UniProtKB:P03300}. CC -!- PTM: [Capsid protein VP0]: Myristoylation is required for the formation CC of pentamers during virus assembly. Further assembly of 12 pentamers CC and a molecule of genomic RNA generates the provirion. CC {ECO:0000250|UniProtKB:P03300}. CC -!- PTM: [Capsid protein VP0]: During virion maturation, immature virions CC are rendered infectious following cleavage of VP0 into VP4 and VP2. CC This maturation seems to be an autocatalytic event triggered by the CC presence of RNA in the capsid and it is followed by a conformational CC change infectious virion. {ECO:0000250|UniProtKB:P03300}. CC -!- PTM: [Capsid protein VP4]: Myristoylation is required during RNA CC encapsidation and formation of the mature virus particle. CC {ECO:0000250|UniProtKB:P03300}. CC -!- PTM: [Viral protein genome-linked]: VPg is uridylylated by the CC polymerase into VPg-pUpU. This acts as a nucleotide-peptide primer for CC the genomic RNA replication. {ECO:0000250|UniProtKB:P03300}. CC -!- SIMILARITY: Belongs to the picornaviruses polyprotein family. CC {ECO:0000305}. CC -!- WEB RESOURCE: Name=Virus Particle ExploreR db; Note=Icosahedral capsid CC structure at high resolution; CC URL="https://viperdb.scripps.edu/Info_Page.php?VDB=1aym"; CC -!- WEB RESOURCE: Name=Virus Particle ExploreR db; Note=Icosahedral capsid CC structure; CC URL="https://viperdb.scripps.edu/Info_Page.php?VDB=1ayn"; CC -!- WEB RESOURCE: Name=Virus Particle ExploreR db; Note=Icosahedral capsid CC structure in complex with antiviral drug VP63843 (pleconaril); CC URL="https://viperdb.scripps.edu/Info_Page.php?VDB=1c8m"; CC -!- WEB RESOURCE: Name=Virus Particle ExploreR db; Note=Icosahedral capsid CC structure in complex with a two-domain fragment of its cellular CC receptor ICAM1; CC URL="https://viperdb.scripps.edu/Info_Page.php?VDB=1d3e"; CC -!- WEB RESOURCE: Name=Virus Particle ExploreR db; Note=Icosahedral capsid CC structure in complex with antiviral compound pleconaril; CC URL="https://viperdb.scripps.edu/Info_Page.php?VDB=1ncr"; CC -!- WEB RESOURCE: Name=Virus Particle ExploreR db; Note=Icosahedral capsid CC structure; CC URL="https://viperdb.scripps.edu/Info_Page.php?VDB=1nd2"; CC -!- WEB RESOURCE: Name=Virus Particle ExploreR db; Note=Icosahedral capsid CC structure in complex with antiviral compound pleconaril; CC URL="https://viperdb.scripps.edu/Info_Page.php?VDB=1nd3"; CC -!- WEB RESOURCE: Name=Virus Particle ExploreR db; Note=Icosahedral capsid CC structure in complex with antiviral compound VP61209; CC URL="https://viperdb.scripps.edu/Info_Page.php?VDB=1qju"; CC -!- WEB RESOURCE: Name=Virus Particle ExploreR db; Note=Icosahedral capsid CC structure in complex with antiviral compound WIN68934; CC URL="https://viperdb.scripps.edu/Info_Page.php?VDB=1qjx"; CC -!- WEB RESOURCE: Name=Virus Particle ExploreR db; Note=Icosahedral capsid CC structure in complex with antiviral compound VP65099; CC URL="https://viperdb.scripps.edu/Info_Page.php?VDB=1qjy"; CC --------------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution (CC BY 4.0) License CC --------------------------------------------------------------------------- DR EMBL; L24917; AAA69862.1; -; Genomic_RNA. DR PDB; 1AYM; X-ray; 2.15 A; 1=569-853, 2=70-330, 3=331-568. DR PDB; 1AYN; X-ray; 2.90 A; 1=569-853, 2=70-330, 3=331-568. DR PDB; 1C8M; X-ray; 2.80 A; 1=569-853, 2=79-330, 3=331-568, 4=2-78. DR PDB; 1D3E; EM; 28.00 A; 1=570-853, 2=79-330, 3=331-568, 4=2-69. DR PDB; 1NCR; X-ray; 2.70 A; A=569-853, B=70-330, C=331-568, D=2-69. DR PDB; 1ND2; X-ray; 2.50 A; A=569-853, B=70-330, C=331-568, D=2-69. DR PDB; 1ND3; X-ray; 2.80 A; A=569-853, B=70-330, C=331-568, D=2-69. DR PDB; 1QJU; X-ray; 2.80 A; 1=569-853, 2=70-330, 3=331-568, 4=2-69. DR PDB; 1QJX; X-ray; 2.80 A; 1=569-853, 2=70-330, 3=331-568, 4=2-69. DR PDB; 1QJY; X-ray; 2.80 A; 1=569-853, 2=70-330, 3=331-568, 4=2-69. DR PDB; 1TP7; X-ray; 2.40 A; A/B/C/D=1694-2153. DR PDB; 1XR7; X-ray; 2.30 A; A/B=1694-2153. DR PDB; 4K50; X-ray; 2.93 A; A/E/I/M=1694-2153. DR PDBsum; 1AYM; -. DR PDBsum; 1AYN; -. DR PDBsum; 1C8M; -. DR PDBsum; 1D3E; -. DR PDBsum; 1NCR; -. DR PDBsum; 1ND2; -. DR PDBsum; 1ND3; -. DR PDBsum; 1QJU; -. DR PDBsum; 1QJX; -. DR PDBsum; 1QJY; -. DR PDBsum; 1TP7; -. DR PDBsum; 1XR7; -. DR PDBsum; 4K50; -. DR SMR; Q82122; -. DR BindingDB; Q82122; -. DR ChEMBL; CHEMBL5296; -. DR DrugBank; DB08715; 2,6-DIMETHYL-1-(3-[3-METHYL-5-ISOXAZOLYL]-PROPANYL)-4-[2-METHYL-4-ISOXAZOLYL]-PHENOL. DR DrugBank; DB08713; 2,6-DIMETHYL-1-(3-[3-METHYL-5-ISOXAZOLYL]-PROPANYL)-4-[2N-METHYL-2H-TETRAZOL-5-YL]-PHENOL. DR DrugBank; DB08714; 2,6-DIMETHYL-1-(3-[3-METHYL-5-ISOXAZOLYL]-PROPANYL)-4-[4-METHYL-2H-TETRAZOL-2-YL]-PHENOL. DR DrugBank; DB03017; Lauric acid. DR DrugBank; DB08231; Myristic acid. DR MEROPS; C03.007; -. DR MEROPS; N08.001; -. DR BRENDA; 2.7.7.48; 2703. DR BRENDA; 3.4.22.28; 2703. DR EvolutionaryTrace; Q82122; -. DR Proteomes; UP000007680; Genome. DR GO; GO:0044162; C:host cell cytoplasmic vesicle membrane; IEA:UniProtKB-SubCell. DR GO; GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell. DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW. DR GO; GO:0039618; C:T=pseudo3 icosahedral viral capsid; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004197; F:cysteine-type endopeptidase activity; IEA:UniProtKB-EC. DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. DR GO; GO:0005216; F:monoatomic ion channel activity; IEA:UniProtKB-KW. DR GO; GO:0017111; F:ribonucleoside triphosphate phosphatase activity; IEA:UniProtKB-EC. DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW. DR GO; GO:0003724; F:RNA helicase activity; IEA:InterPro. DR GO; GO:0003968; F:RNA-dependent RNA polymerase activity; IEA:UniProtKB-KW. DR GO; GO:0005198; F:structural molecule activity; IEA:InterPro. DR GO; GO:0006260; P:DNA replication; IEA:UniProtKB-KW. DR GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro. DR GO; GO:0075509; P:endocytosis involved in viral entry into host cell; IEA:UniProtKB-KW. DR GO; GO:0039520; P:induction by virus of host autophagy; ISS:UniProtKB. DR GO; GO:0044694; P:pore-mediated entry of viral genome into host cell; IEA:UniProtKB-KW. DR GO; GO:0051259; P:protein complex oligomerization; IEA:UniProtKB-KW. DR GO; GO:0006508; P:proteolysis; IEA:UniProtKB-KW. DR GO; GO:0039657; P:suppression by virus of host gene expression; IEA:UniProtKB-KW. DR GO; GO:0039522; P:suppression by virus of host mRNA export from nucleus; IEA:UniProtKB-KW. DR GO; GO:0039540; P:suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signaling pathway via inhibition of host RIG-I activity; IDA:UniProtKB. DR GO; GO:0039694; P:viral RNA genome replication; IEA:InterPro. DR GO; GO:0019062; P:virion attachment to host cell; IEA:UniProtKB-KW. DR GO; GO:0039707; P:virus-mediated pore formation in host cell membrane; IEA:UniProtKB-KW. DR CDD; cd23213; Enterovirus_RdRp; 1. DR CDD; cd00205; rhv_like; 3. DR Gene3D; 1.20.960.20; -; 1. DR Gene3D; 2.60.120.20; -; 3. DR Gene3D; 3.30.70.270; -; 1. DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1. DR Gene3D; 6.10.20.20; Poliovirus 3A protein-like; 1. DR Gene3D; 4.10.880.10; Poliovirus 3D polymerase Domain 1 (Nucleotidyltransferase); 2. DR Gene3D; 2.40.10.10; Trypsin-like serine proteases; 4. DR InterPro; IPR043502; DNA/RNA_pol_sf. DR InterPro; IPR000605; Helicase_SF3_ssDNA/RNA_vir. DR InterPro; IPR014759; Helicase_SF3_ssRNA_vir. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR014838; P3A. DR InterPro; IPR036203; P3A_soluble_dom. DR InterPro; IPR044067; PCV_3C_PRO. DR InterPro; IPR000081; Peptidase_C3. DR InterPro; IPR000199; Peptidase_C3A/C3B_picornavir. DR InterPro; IPR009003; Peptidase_S1_PA. DR InterPro; IPR043504; Peptidase_S1_PA_chymotrypsin. DR InterPro; IPR003138; Pico_P1A. DR InterPro; IPR002527; Pico_P2B. DR InterPro; IPR001676; Picornavirus_capsid. DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase. DR InterPro; IPR033703; Rhv-like. DR InterPro; IPR001205; RNA-dir_pol_C. DR InterPro; IPR007094; RNA-dir_pol_PSvirus. DR InterPro; IPR029053; Viral_coat. DR Pfam; PF08727; P3A; 1. DR Pfam; PF00548; Peptidase_C3; 1. DR Pfam; PF02226; Pico_P1A; 1. DR Pfam; PF00947; Pico_P2A; 1. DR Pfam; PF01552; Pico_P2B; 1. DR Pfam; PF00680; RdRP_1; 1. DR Pfam; PF00073; Rhv; 3. DR Pfam; PF00910; RNA_helicase; 1. DR SUPFAM; SSF56672; DNA/RNA polymerases; 1. DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1. DR SUPFAM; SSF88633; Positive stranded ssRNA viruses; 2. DR SUPFAM; SSF89043; Soluble domain of poliovirus core protein 3a; 1. DR SUPFAM; SSF50494; Trypsin-like serine proteases; 2. DR PROSITE; PS51874; PCV_3C_PRO; 1. DR PROSITE; PS50507; RDRP_SSRNA_POS; 1. DR PROSITE; PS51218; SF3_HELICASE_2; 1. PE 1: Evidence at protein level; KW 3D-structure; Activation of host autophagy by virus; ATP-binding; KW Autocatalytic cleavage; Capsid protein; Covalent protein-RNA linkage; KW DNA replication; Eukaryotic host gene expression shutoff by virus; KW Eukaryotic host translation shutoff by virus; Helicase; Host cytoplasm; KW Host cytoplasmic vesicle; Host gene expression shutoff by virus; KW Host membrane; Host mRNA suppression by virus; Host nucleus; KW Host-virus interaction; Hydrolase; KW Inhibition of host innate immune response by virus; KW Inhibition of host mRNA nuclear export by virus; KW Inhibition of host RIG-I by virus; Inhibition of host RLR pathway by virus; KW Ion channel; Ion transport; Lipoprotein; Magnesium; Membrane; KW Metal-binding; Myristate; Nucleotide-binding; Nucleotidyltransferase; KW Phosphoprotein; Pore-mediated penetration of viral genome into host cell; KW Protease; Repeat; RNA-binding; RNA-directed RNA polymerase; KW T=pseudo3 icosahedral capsid protein; Thiol protease; Transferase; KW Transport; Viral attachment to host cell; Viral immunoevasion; KW Viral ion channel; Viral penetration into host cytoplasm; KW Viral RNA replication; Virion; Virus endocytosis by host; KW Virus entry into host cell; Zinc; Zinc-finger. FT INIT_MET 1 FT /note="Removed; by host" FT /evidence="ECO:0000250|UniProtKB:P03300" FT CHAIN 2..2153 FT /note="Genome polyprotein" FT /id="PRO_0000426551" FT CHAIN 2..853 FT /note="P1" FT /id="PRO_0000426552" FT CHAIN 2..330 FT /note="Capsid protein VP0" FT /id="PRO_0000426553" FT CHAIN 2..69 FT /note="Capsid protein VP4" FT /id="PRO_0000426554" FT CHAIN 70..330 FT /note="Capsid protein VP2" FT /id="PRO_0000426555" FT CHAIN 331..562 FT /note="Capsid protein VP3" FT /id="PRO_0000426556" FT CHAIN 563..853 FT /note="Capsid protein VP1" FT /id="PRO_0000426557" FT CHAIN 854..1412 FT /note="P2" FT /id="PRO_0000426558" FT CHAIN 854..995 FT /note="Protease 2A" FT /id="PRO_0000426559" FT CHAIN 996..1090 FT /note="Protein 2B" FT /id="PRO_0000040041" FT CHAIN 1091..1412 FT /note="Protein 2C" FT /id="PRO_0000040042" FT CHAIN 1413..2153 FT /note="P3" FT /id="PRO_0000426560" FT CHAIN 1413..1510 FT /note="Protein 3AB" FT /id="PRO_0000426561" FT CHAIN 1413..1489 FT /note="Protein 3A" FT /id="PRO_0000040043" FT CHAIN 1490..1510 FT /note="Viral protein genome-linked" FT /id="PRO_0000426562" FT CHAIN 1511..2153 FT /note="Protein 3CD" FT /id="PRO_0000426563" FT CHAIN 1511..1693 FT /note="Protease 3C" FT /id="PRO_0000426564" FT CHAIN 1694..2153 FT /note="RNA-directed RNA polymerase" FT /id="PRO_0000426565" FT TOPO_DOM 2..1466 FT /note="Cytoplasmic" FT /evidence="ECO:0000255" FT INTRAMEM 1467..1482 FT /evidence="ECO:0000255" FT TOPO_DOM 1483..2153 FT /note="Cytoplasmic" FT /evidence="ECO:0000255" FT DOMAIN 1186..1346 FT /note="SF3 helicase" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00551" FT DOMAIN 1511..1689 FT /note="Peptidase C3" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01222" FT DOMAIN 1921..2034 FT /note="RdRp catalytic" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00539" FT ZN_FING 1353..1369 FT /note="C4-type; degenerate" FT /evidence="ECO:0000250|UniProtKB:B9VUU3" FT REGION 565..582 FT /note="Amphipathic alpha-helix" FT /evidence="ECO:0000255" FT REGION 1091..1224 FT /note="Oligomerization" FT /evidence="ECO:0000250|UniProtKB:P03300" FT REGION 1091..1160 FT /note="Membrane-binding" FT /evidence="ECO:0000250|UniProtKB:P03300" FT REGION 1112..1116 FT /note="RNA-binding" FT /evidence="ECO:0000250|UniProtKB:P03300" FT REGION 1396..1403 FT /note="RNA-binding" FT /evidence="ECO:0000250|UniProtKB:P03300" FT REGION 1407..1412 FT /note="Oligomerization" FT /evidence="ECO:0000250|UniProtKB:P03300" FT ACT_SITE 871 FT /note="For protease 2A activity" FT /evidence="ECO:0000250|UniProtKB:P03300" FT ACT_SITE 888 FT /note="For protease 2A activity" FT /evidence="ECO:0000250|UniProtKB:P03300" FT ACT_SITE 959 FT /note="For protease 2A activity" FT /evidence="ECO:0000250|UniProtKB:P03300" FT ACT_SITE 1550 FT /note="For protease 3C activity" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01222" FT ACT_SITE 1581 FT /note="For protease 3C activity" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01222" FT ACT_SITE 1657 FT /note="For protease 3C activity" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01222" FT BINDING 905 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="1" FT /ligand_note="structural" FT /evidence="ECO:0000250|UniProtKB:P04936" FT BINDING 907 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="1" FT /ligand_note="structural" FT /evidence="ECO:0000250|UniProtKB:P04936" FT BINDING 965 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="1" FT /ligand_note="structural" FT /evidence="ECO:0000250|UniProtKB:P04936" FT BINDING 967 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="1" FT /ligand_note="structural" FT /evidence="ECO:0000250|UniProtKB:P04936" FT BINDING 1353 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="2" FT /evidence="ECO:0000250|UniProtKB:B9VUU3" FT BINDING 1364 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="2" FT /evidence="ECO:0000250|UniProtKB:B9VUU3" FT BINDING 1369 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="2" FT /evidence="ECO:0000250|UniProtKB:B9VUU3" FT BINDING 1927 FT /ligand="Mg(2+)" FT /ligand_id="ChEBI:CHEBI:18420" FT /ligand_label="1" FT /ligand_note="catalytic; for RdRp activity" FT /evidence="ECO:0000250|UniProtKB:P03300" FT BINDING 1927 FT /ligand="Mg(2+)" FT /ligand_id="ChEBI:CHEBI:18420" FT /ligand_label="2" FT /ligand_note="catalytic; for RdRp activity" FT /evidence="ECO:0000250|UniProtKB:P03300" FT BINDING 2020 FT /ligand="Mg(2+)" FT /ligand_id="ChEBI:CHEBI:18420" FT /ligand_label="1" FT /ligand_note="catalytic; for RdRp activity" FT /evidence="ECO:0000250|UniProtKB:P03300" FT BINDING 2020 FT /ligand="Mg(2+)" FT /ligand_id="ChEBI:CHEBI:18420" FT /ligand_label="2" FT /ligand_note="catalytic; for RdRp activity" FT /evidence="ECO:0000250|UniProtKB:P03300" FT SITE 69..70 FT /note="Cleavage; by autolysis" FT /evidence="ECO:0000250|UniProtKB:P03300" FT SITE 330..331 FT /note="Cleavage; by protease 3C" FT /evidence="ECO:0000250|UniProtKB:P03301" FT SITE 853..854 FT /note="Cleavage; by autolysis" FT /evidence="ECO:0000250|UniProtKB:P03301" FT SITE 995..996 FT /note="Cleavage; by protease 3C" FT /evidence="ECO:0000250|UniProtKB:P03301" FT SITE 1090..1091 FT /note="Cleavage; by protease 3C" FT /evidence="ECO:0000250|UniProtKB:P03301" FT SITE 1115 FT /note="Involved in the interaction with host RTN3" FT /evidence="ECO:0000250|UniProtKB:Q66478" FT SITE 1412..1413 FT /note="Cleavage; by protease 3C" FT /evidence="ECO:0000250|UniProtKB:P03301" FT SITE 1489..1490 FT /note="Cleavage; by protease 3C" FT /evidence="ECO:0000250|UniProtKB:P03301" FT SITE 1510..1511 FT /note="Cleavage; by protease 3C" FT /evidence="ECO:0000250|UniProtKB:P03301" FT SITE 1693..1694 FT /note="Cleavage; by protease 3C" FT /evidence="ECO:0000250|UniProtKB:P03301" FT MOD_RES 1492 FT /note="O-(5'-phospho-RNA)-tyrosine" FT /evidence="ECO:0000250|UniProtKB:P03300" FT LIPID 2 FT /note="N-myristoyl glycine; by host" FT /evidence="ECO:0000250|UniProtKB:P03300" FT CONFLICT 547..548 FT /note="KD -> NH (in Ref. 1; AAA69862)" FT /evidence="ECO:0000305" FT STRAND 3..5 FT /evidence="ECO:0007829|PDB:1ND2" FT STRAND 28..30 FT /evidence="ECO:0007829|PDB:1ND2" FT STRAND 33..35 FT /evidence="ECO:0007829|PDB:1ND2" FT HELIX 36..38 FT /evidence="ECO:0007829|PDB:1ND2" FT STRAND 83..87 FT /evidence="ECO:0007829|PDB:1AYM" FT STRAND 90..96 FT /evidence="ECO:0007829|PDB:1AYM" FT HELIX 103..105 FT /evidence="ECO:0007829|PDB:1AYM" FT TURN 113..115 FT /evidence="ECO:0007829|PDB:1AYM" FT HELIX 126..128 FT /evidence="ECO:0007829|PDB:1AYM" FT STRAND 138..140 FT /evidence="ECO:0007829|PDB:1AYM" FT STRAND 147..151 FT /evidence="ECO:0007829|PDB:1AYM" FT HELIX 153..155 FT /evidence="ECO:0007829|PDB:1AYM" FT HELIX 159..167 FT /evidence="ECO:0007829|PDB:1AYM" FT STRAND 168..180 FT /evidence="ECO:0007829|PDB:1AYM" FT STRAND 188..197 FT /evidence="ECO:0007829|PDB:1AYM" FT STRAND 204..206 FT /evidence="ECO:0007829|PDB:1AYM" FT HELIX 213..216 FT /evidence="ECO:0007829|PDB:1AYM" FT HELIX 219..221 FT /evidence="ECO:0007829|PDB:1AYM" FT TURN 225..227 FT /evidence="ECO:0007829|PDB:1AYM" FT HELIX 239..241 FT /evidence="ECO:0007829|PDB:1AYM" FT TURN 242..245 FT /evidence="ECO:0007829|PDB:1AYM" FT HELIX 248..253 FT /evidence="ECO:0007829|PDB:1AYM" FT STRAND 254..260 FT /evidence="ECO:0007829|PDB:1AYM" FT TURN 261..263 FT /evidence="ECO:0007829|PDB:1AYM" FT STRAND 265..271 FT /evidence="ECO:0007829|PDB:1AYM" FT STRAND 276..280 FT /evidence="ECO:0007829|PDB:1AYM" FT TURN 282..284 FT /evidence="ECO:0007829|PDB:1AYM" FT STRAND 288..299 FT /evidence="ECO:0007829|PDB:1AYM" FT STRAND 307..323 FT /evidence="ECO:0007829|PDB:1AYM" FT TURN 338..341 FT /evidence="ECO:0007829|PDB:1AYM" FT STRAND 353..355 FT /evidence="ECO:0007829|PDB:1AYM" FT STRAND 369..372 FT /evidence="ECO:0007829|PDB:1ND2" FT HELIX 374..377 FT /evidence="ECO:0007829|PDB:1AYM" FT TURN 389..393 FT /evidence="ECO:0007829|PDB:1AYM" FT HELIX 395..398 FT /evidence="ECO:0007829|PDB:1AYM" FT STRAND 399..402 FT /evidence="ECO:0007829|PDB:1AYM" FT STRAND 406..409 FT /evidence="ECO:0007829|PDB:1C8M" FT STRAND 411..416 FT /evidence="ECO:0007829|PDB:1AYM" FT TURN 422..426 FT /evidence="ECO:0007829|PDB:1AYM" FT HELIX 428..433 FT /evidence="ECO:0007829|PDB:1AYM" FT STRAND 436..441 FT /evidence="ECO:0007829|PDB:1AYM" FT STRAND 443..449 FT /evidence="ECO:0007829|PDB:1AYM" FT STRAND 458..464 FT /evidence="ECO:0007829|PDB:1AYM" FT STRAND 466..468 FT /evidence="ECO:0007829|PDB:1AYM" FT HELIX 474..478 FT /evidence="ECO:0007829|PDB:1AYM" FT STRAND 480..486 FT /evidence="ECO:0007829|PDB:1AYM" FT STRAND 488..490 FT /evidence="ECO:0007829|PDB:1AYM" FT STRAND 492..497 FT /evidence="ECO:0007829|PDB:1AYM" FT STRAND 502..504 FT /evidence="ECO:0007829|PDB:1AYM" FT STRAND 506..509 FT /evidence="ECO:0007829|PDB:1AYM" FT HELIX 512..514 FT /evidence="ECO:0007829|PDB:1ND2" FT STRAND 518..525 FT /evidence="ECO:0007829|PDB:1AYM" FT STRAND 537..545 FT /evidence="ECO:0007829|PDB:1AYM" FT STRAND 550..554 FT /evidence="ECO:0007829|PDB:1AYM" FT HELIX 570..579 FT /evidence="ECO:0007829|PDB:1AYM" FT STRAND 582..584 FT /evidence="ECO:0007829|PDB:1AYM" FT HELIX 605..607 FT /evidence="ECO:0007829|PDB:1AYM" FT HELIX 615..618 FT /evidence="ECO:0007829|PDB:1AYM" FT HELIX 631..633 FT /evidence="ECO:0007829|PDB:1AYM" FT HELIX 635..639 FT /evidence="ECO:0007829|PDB:1AYM" FT STRAND 643..651 FT /evidence="ECO:0007829|PDB:1AYM" FT HELIX 656..659 FT /evidence="ECO:0007829|PDB:1AYM" FT STRAND 660..665 FT /evidence="ECO:0007829|PDB:1AYM" FT HELIX 672..678 FT /evidence="ECO:0007829|PDB:1AYM" FT STRAND 681..701 FT /evidence="ECO:0007829|PDB:1AYM" FT STRAND 707..713 FT /evidence="ECO:0007829|PDB:1AYM" FT HELIX 726..729 FT /evidence="ECO:0007829|PDB:1AYM" FT STRAND 731..739 FT /evidence="ECO:0007829|PDB:1AYM" FT STRAND 746..749 FT /evidence="ECO:0007829|PDB:1AYM" FT STRAND 754..760 FT /evidence="ECO:0007829|PDB:1AYM" FT STRAND 764..769 FT /evidence="ECO:0007829|PDB:1AYM" FT TURN 776..779 FT /evidence="ECO:0007829|PDB:1AYM" FT STRAND 784..789 FT /evidence="ECO:0007829|PDB:1AYM" FT STRAND 798..816 FT /evidence="ECO:0007829|PDB:1AYM" FT HELIX 838..840 FT /evidence="ECO:0007829|PDB:1AYM" FT STRAND 847..849 FT /evidence="ECO:0007829|PDB:1AYM" FT STRAND 1695..1701 FT /evidence="ECO:0007829|PDB:1XR7" FT HELIX 1702..1705 FT /evidence="ECO:0007829|PDB:1XR7" FT TURN 1722..1726 FT /evidence="ECO:0007829|PDB:1XR7" FT HELIX 1747..1751 FT /evidence="ECO:0007829|PDB:1XR7" FT HELIX 1752..1754 FT /evidence="ECO:0007829|PDB:1XR7" FT HELIX 1765..1779 FT /evidence="ECO:0007829|PDB:1XR7" FT HELIX 1790..1795 FT /evidence="ECO:0007829|PDB:1XR7" FT STRAND 1805..1807 FT /evidence="ECO:0007829|PDB:1XR7" FT TURN 1811..1817 FT /evidence="ECO:0007829|PDB:1XR7" FT HELIX 1820..1823 FT /evidence="ECO:0007829|PDB:1XR7" FT TURN 1826..1829 FT /evidence="ECO:0007829|PDB:1XR7" FT HELIX 1832..1841 FT /evidence="ECO:0007829|PDB:1XR7" FT STRAND 1847..1851 FT /evidence="ECO:0007829|PDB:1XR7" FT STRAND 1854..1856 FT /evidence="ECO:0007829|PDB:1TP7" FT HELIX 1859..1862 FT /evidence="ECO:0007829|PDB:1XR7" FT STRAND 1868..1871 FT /evidence="ECO:0007829|PDB:1XR7" FT HELIX 1874..1893 FT /evidence="ECO:0007829|PDB:1XR7" FT TURN 1897..1900 FT /evidence="ECO:0007829|PDB:1XR7" FT HELIX 1907..1917 FT /evidence="ECO:0007829|PDB:1XR7" FT STRAND 1920..1930 FT /evidence="ECO:0007829|PDB:1XR7" FT HELIX 1931..1934 FT /evidence="ECO:0007829|PDB:1XR7" FT HELIX 1937..1949 FT /evidence="ECO:0007829|PDB:1XR7" FT HELIX 1958..1961 FT /evidence="ECO:0007829|PDB:1XR7" FT STRAND 1962..1967 FT /evidence="ECO:0007829|PDB:1XR7" FT STRAND 1970..1977 FT /evidence="ECO:0007829|PDB:1XR7" FT HELIX 1985..2004 FT /evidence="ECO:0007829|PDB:1XR7" FT HELIX 2010..2012 FT /evidence="ECO:0007829|PDB:1XR7" FT STRAND 2014..2018 FT /evidence="ECO:0007829|PDB:1XR7" FT STRAND 2021..2028 FT /evidence="ECO:0007829|PDB:1XR7" FT HELIX 2032..2037 FT /evidence="ECO:0007829|PDB:1XR7" FT HELIX 2038..2042 FT /evidence="ECO:0007829|PDB:1XR7" FT STRAND 2046..2049 FT /evidence="ECO:0007829|PDB:1XR7" FT TURN 2060..2062 FT /evidence="ECO:0007829|PDB:1XR7" FT STRAND 2068..2072 FT /evidence="ECO:0007829|PDB:1XR7" FT STRAND 2079..2083 FT /evidence="ECO:0007829|PDB:1XR7" FT HELIX 2086..2093 FT /evidence="ECO:0007829|PDB:1XR7" FT STRAND 2095..2097 FT /evidence="ECO:0007829|PDB:1XR7" FT HELIX 2099..2101 FT /evidence="ECO:0007829|PDB:1XR7" FT HELIX 2102..2113 FT /evidence="ECO:0007829|PDB:1XR7" FT HELIX 2114..2116 FT /evidence="ECO:0007829|PDB:1XR7" FT HELIX 2118..2128 FT /evidence="ECO:0007829|PDB:1XR7" FT HELIX 2132..2135 FT /evidence="ECO:0007829|PDB:1XR7" FT HELIX 2142..2150 FT /evidence="ECO:0007829|PDB:1XR7" SQ SEQUENCE 2153 AA; 242244 MW; 6B11D0D93DF11C04 CRC64; MGAQVSRQNV GTHSTQNMVS NGSSLNYFNI NYFKDAASSG ASRLDFSQDP SKFTDPVKDV LEKGIPTLQS PSVEACGYSD RIIQITRGDS TITSQDVANA VVGYGVWPHY LTPQDATAID KPTQPDTSSN RFYTLDSKMW NSTSKGWWWK LPDALKDMGI FGENMFYHFL GRSGYTVHVQ CNASKFHQGT LLVVMIPEHQ LATVNKGNVN AGYKYTHPGE AGREVGTQVE NEKQPSDDNW LNFDGTLLGN LLIFPHQFIN LRSNNSATLI VPYVNAVPMD SMVRHNNWSL VIIPVCQLQS NNISNIVPIT VSISPMCAEF SGARAKTVVQ GLPVYVTPGS GQFMTTDDMQ SPCALPWYHP TKEIFIPGEV KNLIEMCQVD TLIPINSTQS NIGNVSMYTV TLSPQTKLAE EIFAIKVDIA SHPLATTLIG EIASYFTHWT GSLRFSFMFC GTANTTLKVL LAYTPPGIGK PRSRKEAMLG THVVWDVGLQ STVSLVVPWI SASQYRFTTP DTYSSAGYIT CWYQTNFVVP PNTPNTAEML CFVSGCKDFC LRMARDTDLH KQTGPITQNP VERYVDEVLN EVLVVPNINQ SHPTTSNAAP VLDAAETGHT NKIQPEDTIE TRYVQSSQTL DEMSVESFLG RSGCIHESVL DIVDNYNDQS FTKWNINLQE MAQIRRKFEM FTYARFDSEI TMVPSVAAKD GHIGHIVMQY MYVPPGAPIP TTRDDYAWQS GTNASVFWQH GQPFPRFSLP FLSIASAYYM FYDGYDGDTY KSRYGTVVTN DMGTLCSRIV TSEQLHKVKV VTRIYHKAKH TKAWCPRPPR AVQYSHTHTT NYKLSSEVHN DVAIRPRTNL TTVGPSDMYV HVGNLIYRNL HLFNSDIHDS ILVSYSSDLI IYRTSTQGDG YIPTCNCTEA TYYCKHKNRY YPINVTPHDW YEIQESEYYP KHIQYNLLIG EGPCEPGDCG GKLLCKHGVI GIITAGGEGH VAFIDLRHFH CAEEQGITDY IHMLGEAFGS GFVDSVKDQI NSINPINNIS SKMVKWMLRI ISAMVIIIRN SSDPQTIIAT LTLIGCNGSP WRFLKEKFCK WTQLTYIHKE SDSWLKKFTE MCNAARGLEW IGNKISKFID WMKSMLPQAQ LKVKYLSELK KLNFLEKQVE NLRAADTNTQ EKIKCEIDTL HDLSCKFLPL YASEAKRIKV LYHKCTNIIK QKKRSEPVAV MIHGPPGTGK SITTSFLARM ITNESDIYSL PPDPKYFDGY DNQSVVIMDD IMQNPGGEDM TLFCQMVSSV TFIPPMADLP DKGKPFDSRF VLCSTNHSLL APPTISSLPA MNRRFYLDLD ILVHDNYKDN QGKLDVSRAF RLCDVDSKIG NAKCCPFVCG KAVTFKDRNT CRTYSLSQIY NQILEEDKRR RQVVDVMSAI FQGPISMDKP PPPAITDLLR SVRTPEVIKY CQDNKWIVPA DCQIERDLNI ANSIITIIAN IISIAGIIYI IYKLFCSLQG PYSGEPKPKT KVPERRVVAQ GPEEEFGMSI IKNNTCVVTT TNGKFTGLGI YDRILILPTH ADPGSEIQVN GIHTKVLDSY DLFNKEGVKL EITVLKLDRN EKFRDIRKYI PESEDDYPEC NLALVANQTE PTIIKVGDVV SYGNILLSGT QTARMLKYNY PTKSGYCGGV LYKIGQILGI HVGGNGRDGF SSMLLRSYFT EQQGQIQISK HVKDVGLPSI HTPTKTKLQP SVFYDIFPGS KEPAVLTEKD PRLKVDFDSA LFSKYKGNTE CSLNEHIQVA VAHYSAQLAT LDIDPQPIAM EDSVFGMDGL EALDLNTSAG YPYVTLGIKK KDLINNKTKD ISKLKLALDK YDVDLPMITF LKDELRKKDK IAAGKTRVIE ASSINDTILF RTVYGNLFSK FHLNPGVVTG CAVGCDPETF WSKIPLMLDG DCIMAFDYTN YDGSIHPIWF KALGMVLDNL SFNPTLINRL CNSKHIFKST YYEVEGGVPS GCSGTSIFNS MINNIIIRTL VLDAYKHIDL DKLKIIAYGD DVIFSYKYKL DMEAIAKEGQ KYGLTITPAD KSSEFKELDY GNVTFLKRGF RQDDKYKFLI HPTFPVEEIY ESIRWTKKPS QMQEHVLSLC HLMWHNGPEI YKDFETKIRS VSAGRALYIP PYELLRHEWY EKF //