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Q820S9 (Q820S9_NITEU) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 58. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=3.1.11.2 EMBL CAD83934.1
Gene names
Name:xthA1 EMBL CAD83934.1
Ordered Locus Names:NE0023 EMBL CAD83934.1
OrganismNitrosomonas europaea (strain ATCC 19718 / NBRC 14298) [Complete proteome] [HAMAP] EMBL CAD83934.1
Taxonomic identifier228410 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaNitrosomonadalesNitrosomonadaceaeNitrosomonas

Protein attributes

Sequence length254 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionHydrolase EMBL CAD83934.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA repair

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintracellular

Inferred from electronic annotation. Source: InterPro

   Molecular_functionDNA binding

Inferred from electronic annotation. Source: InterPro

endonuclease activity

Inferred from electronic annotation. Source: InterPro

exodeoxyribonuclease III activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q820S9 [UniParc].

Last modified June 1, 2003. Version 1.
Checksum: B83E234A0C6CDAF5

FASTA25429,612
        10         20         30         40         50         60 
MKIATWNVNS LKVRLQQVID WLNLNQPDIL CLQETKLQDE FFPMDAIAQA GYRSIYIGQK 

        70         80         90        100        110        120 
TYNGVALLSK ETGEDICTAL PGFDDMQKRL IAATYGDLRV ICAYVPNGEH VDSEKYIYKL 

       130        140        150        160        170        180 
EWLSQLNRFL QQQRACYGKV ALLGDFNIAP EDRDVYDPEA WRGQVLCSEP ERQAFRGLLD 

       190        200        210        220        230        240 
TGFVDSFHLF EQPEKTYTWW DYRMMAFRRN RGLRIDHILL SHEMADRCTI WQVDKLPRKL 

       250 
ERPSDHAPVL VELA 

« Hide

References

[1]"Complete genome sequence of the ammonia-oxidizing bacterium and obligate chemolithoautotroph Nitrosomonas europaea."
Chain P., Lamerdin J.E., Larimer F.W., Regala W., Lao V., Land M.L., Hauser L., Hooper A.B., Klotz M.G., Norton J., Sayavedra-Soto L.A., Arciero D.M., Hommes N.G., Whittaker M.M., Arp D.J.
J. Bacteriol. 185:2759-2773(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 19718 / NBRC 14298.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AL954747 Genomic DNA. Translation: CAD83934.1.
RefSeqNP_840124.1. NC_004757.1.

3D structure databases

ProteinModelPortalQ820S9.
SMRQ820S9. Positions 1-253.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING228410.NE0023.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAD83934; CAD83934; NE0023.
GeneID1081066.
KEGGneu:NE0023.
PATRIC22710805. VBINitEur56163_0025.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000034587.
KOK01142.
OMASDKYQYK.
OrthoDBEOG60SCPF.
ProtClustDBCLSK585109.

Enzyme and pathway databases

BioCycNEUR228410:GJNO-26-MONOMER.

Family and domain databases

Gene3D3.60.10.10. 1 hit.
InterProIPR004808. AP_endonuc_1.
IPR020847. AP_endonuclease_F1_BS.
IPR020848. AP_endonuclease_F1_CS.
IPR005135. Endo/exonuclease/phosphatase.
[Graphical view]
PANTHERPTHR22748. PTHR22748. 1 hit.
PfamPF03372. Exo_endo_phos. 1 hit.
[Graphical view]
SUPFAMSSF56219. SSF56219. 1 hit.
TIGRFAMsTIGR00633. xth. 1 hit.
PROSITEPS00726. AP_NUCLEASE_F1_1. 1 hit.
PS00728. AP_NUCLEASE_F1_3. 1 hit.
PS51435. AP_NUCLEASE_F1_4. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ820S9_NITEU
AccessionPrimary (citable) accession number: Q820S9
Entry history
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: April 16, 2014
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)