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Protein
Submitted name:

HAMP domain:Bacterial chemotaxis sensory transducer

Gene

NE1864

Organism
Nitrosomonas europaea (strain ATCC 19718 / CIP 103999 / KCTC 2705 / NBRC 14298)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciNEUR228410:GJNO-1829-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
HAMP domain:Bacterial chemotaxis sensory transducerImported
Gene namesi
Ordered Locus Names:NE1864Imported
OrganismiNitrosomonas europaea (strain ATCC 19718 / CIP 103999 / KCTC 2705 / NBRC 14298)Imported
Taxonomic identifieri228410 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaNitrosomonadalesNitrosomonadaceaeNitrosomonas
Proteomesi
  • UP000001416 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei12 – 34HelicalSequence analysisAdd BLAST23
Transmembranei186 – 210HelicalSequence analysisAdd BLAST25

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi228410.NE1864.

Structurei

3D structure databases

ProteinModelPortaliQ820J9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini211 – 263HAMPInterPro annotationAdd BLAST53
Domaini449 – 678Methyl-accepting transducerInterPro annotationAdd BLAST230

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili649 – 694Sequence analysisAdd BLAST46

Keywords - Domaini

Coiled coilSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4105C8Q. Bacteria.
COG0840. LUCA.
HOGENOMiHOG000148074.
KOiK03406.
OMAiMQTIHLI.
OrthoDBiPOG091H0QRR.
PhylomeDBiQ820J9.

Family and domain databases

CDDicd06225. HAMP. 1 hit.
InterProiIPR024478. 4HB_MCP.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF12729. 4HB_MCP_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTiSM00304. HAMP. 2 hits.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q820J9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLQNMTIKSR LIFIVGLLSL ALISVGSVGL YGLYQSKTKL ETIYQDRVVV
60 70 80 90 100
LGHFSQILDS LLQVRMYALL VTNLRDTGVA RQRAAQVVDE DAKINELWRK
110 120 130 140 150
FTQTYMTPEE QSLAGRFTEQ WKVYQAARNQ TLNHAINGNF DAAVEVTLQD
160 170 180 190 200
AGPKYEAVHG SLMQLIGLQE SVTAQEYEQL QAMTSIIFAT TITLTVLGIL
210 220 230 240 250
LAGGVGFVLI RGVSRSINQA MEVADGIANG RLDQRIEVTG RDEISRLLQS
260 270 280 290 300
MTKMVEVLNG FMSAQQKMSQ QHDAGAISYR IPASQFPGSY GEIANSINEL
310 320 330 340 350
VKAHIAVKMR VVEVVARYAQ GDLSVDMDRL PGEKAKVTET MDKVKASLQA
360 370 380 390 400
INGEIKYLVE GATAGDFSRR GKADKYQHDF HAMVSNLNQL MQTCETSLED
410 420 430 440 450
VIRIMDALAE GDLTQKITRE YQGMFATMKD DANITVGQLA SIVRQIKDAT
460 470 480 490 500
GLISTASKEI ADGNSDLSQR TEEQAANLEE TAASMEELTS TVKQNADNAR
510 520 530 540 550
QANQLAASAS DVAVKGGEVV SQVVQTMSAI NDSSKKIVDI ISVIDGIAFQ
560 570 580 590 600
TNILALNAAV EAARAGEQGR GFAVVATEVR TLAQRSAAAA REIKELISNS
610 620 630 640 650
VHKVEDGTQL VDQAGRTMEE VVLSVKRVTD IMGEISAASQ EQSLGIEQVN
660 670 680 690 700
QAISQMDEIT QQNAALVEEA AAASESMREQ ADQLSRAVAA FKLEHGMAAA
710 720 730 740 750
HTDSQPFVER RGPNRATNVE RLPQQVKGHR KTASPGASSS IPTGTDGDWE

EF
Length:752
Mass (Da):81,679
Last modified:June 1, 2003 - v1
Checksum:i04F502FF20CEB86D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL954747 Genomic DNA. Translation: CAD85775.1.
RefSeqiWP_011112402.1. NC_004757.1.

Genome annotation databases

EnsemblBacteriaiCAD85775; CAD85775; NE1864.
KEGGineu:NE1864.
PATRICi22715001. VBINitEur56163_2087.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL954747 Genomic DNA. Translation: CAD85775.1.
RefSeqiWP_011112402.1. NC_004757.1.

3D structure databases

ProteinModelPortaliQ820J9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi228410.NE1864.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAD85775; CAD85775; NE1864.
KEGGineu:NE1864.
PATRICi22715001. VBINitEur56163_2087.

Phylogenomic databases

eggNOGiENOG4105C8Q. Bacteria.
COG0840. LUCA.
HOGENOMiHOG000148074.
KOiK03406.
OMAiMQTIHLI.
OrthoDBiPOG091H0QRR.
PhylomeDBiQ820J9.

Enzyme and pathway databases

BioCyciNEUR228410:GJNO-1829-MONOMER.

Family and domain databases

CDDicd06225. HAMP. 1 hit.
InterProiIPR024478. 4HB_MCP.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF12729. 4HB_MCP_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTiSM00304. HAMP. 2 hits.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ820J9_NITEU
AccessioniPrimary (citable) accession number: Q820J9
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: November 2, 2016
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.