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Q81ZU6

- GLGB_NITEU

UniProt

Q81ZU6 - GLGB_NITEU

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Protein

1,4-alpha-glucan branching enzyme GlgB

Gene

glgB

Organism
Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi

Functioni

Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position.UniRule annotation

Catalytic activityi

Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei413 – 4131NucleophileUniRule annotation
Active sitei466 – 4661Proton donorUniRule annotation

GO - Molecular functioni

  1. 1,4-alpha-glucan branching enzyme activity Source: UniProtKB-HAMAP
  2. cation binding Source: InterPro
  3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Carbohydrate metabolism, Glycogen biosynthesis, Glycogen metabolism

Enzyme and pathway databases

BioCyciNEUR228410:GJNO-2068-MONOMER.
UniPathwayiUPA00164.

Names & Taxonomyi

Protein namesi
Recommended name:
1,4-alpha-glucan branching enzyme GlgBUniRule annotation (EC:2.4.1.18UniRule annotation)
Alternative name(s):
1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferaseUniRule annotation
Alpha-(1->4)-glucan branching enzymeUniRule annotation
Glycogen branching enzymeUniRule annotation
Short name:
BEUniRule annotation
Gene namesi
Name:glgBUniRule annotation
Ordered Locus Names:NE2029
OrganismiNitrosomonas europaea (strain ATCC 19718 / NBRC 14298)
Taxonomic identifieri228410 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaNitrosomonadalesNitrosomonadaceaeNitrosomonas
ProteomesiUP000001416: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 7347341,4-alpha-glucan branching enzyme GlgBPRO_0000188720Add
BLAST

Interactioni

Subunit structurei

Monomer.UniRule annotation

Protein-protein interaction databases

STRINGi228410.NE2029.

Structurei

3D structure databases

ProteinModelPortaliQ81ZU6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0296.
HOGENOMiHOG000283037.
KOiK00700.
OMAiLSYMQHD.
OrthoDBiEOG6JX7GT.
PhylomeDBiQ81ZU6.

Family and domain databases

Gene3Di2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPiMF_00685. GlgB.
InterProiIPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view]
PIRSFiPIRSF000463. GlgB. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 1 hit.
TIGRFAMsiTIGR01515. branching_enzym. 1 hit.

Sequencei

Sequence statusi: Complete.

Q81ZU6-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKSLSSSSPG SSEDSAQSLL LTARLYDPCS FLGMHAAPNG RLIRVFQPYM
60 70 80 90 100
SRVWLHTLSG YQPMRSVHQD GIFEWEGEGV MHPYLLRMEN TATGVIEERH
110 120 130 140 150
DPYAFPMQIS GHDLYLFNEG RLLQAYHMLG AHRVRNHGVT GTRFAVWAPN
160 170 180 190 200
AERVSVVGDF NRWDGRVYPM MVHGHSGVWE LFIPDLPEGA IYKYEIRNRI
210 220 230 240 250
SGEILLKTDP YATTYELRPN NAALTPIEQK YDWKDDDWIA RRKGWDWLHA
260 270 280 290 300
PLNIYELHVG SWKRHPDGRF YSYHELADHL IPYLQDMGYS HVELLPISEH
310 320 330 340 350
PLDESWGYQA TGYFAVTSRY GSPEAFMSFV DRCHQAGIGV ILDWVPAHFP
360 370 380 390 400
QDSFSLARFD GTALYEHEDP RLGYHHDWGT YIFNYGRNEV KSFLLSSAHY
410 420 430 440 450
WLSAFHIDGL RVDAVASMLY LNYSRKEGEW LPNRYGGHEN LEAIEFLRAL
460 470 480 490 500
NTMVHGEFPG ALTFAEESTS WPAVSRPAYL GGLGFSMKWN MGWMNDTLSY
510 520 530 540 550
MQHDPVHRRY HHNELTFNQL YAYTENFVLP LSHDEVVHGK KSMLDKMPGD
560 570 580 590 600
GWQKFANLRL LFTYQMTCPG KKINFMGNEL GQGHEWRVGH ELDWYLLERD
610 620 630 640 650
PHRGIQALTR DLNHLYLNTP ALHELDFFAE GFSWIDCHDV EQSVISYQRH
660 670 680 690 700
ARDGSFVLVV LNFTPILRTG YRVGIPGSSA YQEVFNSDSI YYDGSNAGNA
710 720 730
GKISPTGQPW SGQPDSIIIT LPPLAGVILK AADG
Length:734
Mass (Da):84,102
Last modified:June 1, 2003 - v1
Checksum:iAFB28499C3A49EE4
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL954747 Genomic DNA. Translation: CAD85940.1.
RefSeqiNP_842039.1. NC_004757.1.
WP_011112545.1. NC_004757.1.

Genome annotation databases

EnsemblBacteriaiCAD85940; CAD85940; NE2029.
GeneIDi1082989.
KEGGineu:NE2029.
PATRICi22715383. VBINitEur56163_2275.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL954747 Genomic DNA. Translation: CAD85940.1 .
RefSeqi NP_842039.1. NC_004757.1.
WP_011112545.1. NC_004757.1.

3D structure databases

ProteinModelPortali Q81ZU6.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 228410.NE2029.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAD85940 ; CAD85940 ; NE2029 .
GeneIDi 1082989.
KEGGi neu:NE2029.
PATRICi 22715383. VBINitEur56163_2275.

Phylogenomic databases

eggNOGi COG0296.
HOGENOMi HOG000283037.
KOi K00700.
OMAi LSYMQHD.
OrthoDBi EOG6JX7GT.
PhylomeDBi Q81ZU6.

Enzyme and pathway databases

UniPathwayi UPA00164 .
BioCyci NEUR228410:GJNO-2068-MONOMER.

Family and domain databases

Gene3Di 2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPi MF_00685. GlgB.
InterProi IPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view ]
PIRSFi PIRSF000463. GlgB. 1 hit.
SUPFAMi SSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 1 hit.
TIGRFAMsi TIGR01515. branching_enzym. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of the ammonia-oxidizing bacterium and obligate chemolithoautotroph Nitrosomonas europaea."
    Chain P., Lamerdin J.E., Larimer F.W., Regala W., Lao V., Land M.L., Hauser L., Hooper A.B., Klotz M.G., Norton J., Sayavedra-Soto L.A., Arciero D.M., Hommes N.G., Whittaker M.M., Arp D.J.
    J. Bacteriol. 185:2759-2773(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 19718 / NBRC 14298.

Entry informationi

Entry nameiGLGB_NITEU
AccessioniPrimary (citable) accession number: Q81ZU6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 15, 2003
Last sequence update: June 1, 2003
Last modified: October 29, 2014
This is version 82 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3