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Protein

Chromosome partition protein Smc

Gene

smc

Organism
Coxiella burnetii (strain RSA 493 / Nine Mile phase I)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Required for chromosome condensation and partitioning.UniRule annotation

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi32 – 39ATPUniRule annotation8

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-binding
LigandATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Chromosome partition protein SmcUniRule annotation
Gene namesi
Name:smcUniRule annotation
Ordered Locus Names:CBU_0540
OrganismiCoxiella burnetii (strain RSA 493 / Nine Mile phase I)
Taxonomic identifieri227377 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaLegionellalesCoxiellaceaeCoxiella
Proteomesi
  • UP000002671 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00004092691 – 1169Chromosome partition protein SmcAdd BLAST1169

Proteomic databases

PRIDEiQ81ZL2.

Interactioni

Subunit structurei

Homodimer.UniRule annotation

Protein-protein interaction databases

STRINGi227377.CBU_0540.

Structurei

3D structure databases

ProteinModelPortaliQ81ZL2.
SMRiQ81ZL2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili170 – 507UniRule annotationAdd BLAST338
Coiled coili659 – 1030UniRule annotationAdd BLAST372

Domaini

Contains large globular domains required for ATP hydrolysis at each terminus and a third globular domain forming a flexible hinge near the middle of the molecule. These domains are separated by coiled-coil structures.UniRule annotation

Sequence similaritiesi

Belongs to the SMC family.UniRule annotation

Keywords - Domaini

Coiled coil

Phylogenomic databases

eggNOGiENOG4105CDB. Bacteria.
COG1196. LUCA.
HOGENOMiHOG000036391.
KOiK03529.
OMAiHNKIAME.

Family and domain databases

HAMAPiMF_01894. Smc_prok. 1 hit.
InterProiView protein in InterPro
IPR027417. P-loop_NTPase.
IPR003395. RecF/RecN/SMC_N.
IPR024704. SMC.
IPR010935. SMC_hinge.
IPR036277. SMC_hinge_sf.
IPR011890. SMC_prok.
PfamiView protein in Pfam
PF02463. SMC_N. 1 hit.
PIRSFiPIRSF005719. SMC. 1 hit.
SMARTiView protein in SMART
SM00968. SMC_hinge. 1 hit.
SUPFAMiSSF52540. SSF52540. 2 hits.
SSF75553. SSF75553. 1 hit.
TIGRFAMsiTIGR02168. SMC_prok_B. 1 hit.

Sequencei

Sequence statusi: Complete.

Q81ZL2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MYLKTIKLAG FKSFVDPTLI PIRGSMNAIV GPNGCGKSNV VDAVRWVIGE
60 70 80 90 100
TSAKQLRGQS MSDVIFNGTT SRKPVGKASI ELHFDNSEGR IGGEYAKYGE
110 120 130 140 150
IAIRREVERD GQSNYFINGA HVRRRDVVDV FLGTGLGPRS YAIVEQGMIS
160 170 180 190 200
NLIEAKPEEL RVYIEEAAGI SKYKERRRET ESRMRHTQEN LDRVNDIAEE
210 220 230 240 250
LAKQLRHLKR QANAAERYKA YKQEERALGA QFKVLQWKAL DHKLSEHDQA
260 270 280 290 300
INQKNTRREE KQSEQHRIET EIEKMREQLT DVNEKHNAVQ KRYYGLGADI
310 320 330 340 350
ARLEQRIKDT QEKIHQWQSE LEENENVWEE LQNNTAECEA QITELETELE
360 370 380 390 400
HLKPRSSDIH SAAAEASKEL AQAESNMARW QEAWEAFQAE TSQTMSQLEV
410 420 430 440 450
MRTKREHCER QLTDLEKSKQ QLQQNLKQLQ LDQLLNEIAP LSSQSELLNA
460 470 480 490 500
ELSDSQSKLQ SLAETIASRR DANQTTREEL QTQRRELQAL EARAASLEAL
510 520 530 540 550
QKAALGESDG KISEWLSSQQ LKENPRLGQK LVVNPGWEIA VETVLSGFFD
560 570 580 590 600
AVCVDAALPF LTDLTTVSEG RVTLVEKKSV SASAFDKAPT LASQVKSEWP
610 620 630 640 650
FQQWLAGIYI ADTLDQAKQL QSSLQENESV ITKEGLWLGP HWARISKLQD
660 670 680 690 700
APQSGFLLRE QQLKQLKANI LGQQKKCDEQ EALLKSGEQQ LNQLETDRDT
710 720 730 740 750
LLQTYQKLNA EATTVQSALS TKQAQLDNAQ QQQTRLKIGL NECEQQIEQC
760 770 780 790 800
QQQLTLIKNK ASSLDDSQGL LATRREEMIR ERDHYRTQLI ELREKAHQKR
810 820 830 840 850
KEADELEIRL ASNEDQLSLL RQTVARDQRQ LKQLTERREM LSQYLSEGDK
860 870 880 890 900
PLEELNEKLQ TQLEQRLILE TELREVEKEL EEANQLLRHL EEKRVSTQKA
910 920 930 940 950
LNEAQAQLEE LRMQRQTVSV RQTTIKEQLS ENDFDLEQVM AELPEEATIE
960 970 980 990 1000
SWQEKLDQLV ERIQRMGPIN LAAIEEYESV NERKNYLDKQ HADLTEALEI
1010 1020 1030 1040 1050
LKNAIHKIDR ETRAKFQETY DQVNQQFQSL FPRIFGGGRA TLEMTDTDLL
1060 1070 1080 1090 1100
TAGVIVRAQP PGKRNVTIHM LSGGEKALTA VALVFSLFQL NPAPFCILDE
1110 1120 1130 1140 1150
VDAPLDDINV GRFCQLVKEM SKEVQFLVIS HNKVTIEMAD YLMGVTMQEP
1160
GVSRIVSVNM QEAIGLVEA
Length:1,169
Mass (Da):133,551
Last modified:June 1, 2003 - v1
Checksum:iA954FBE459169FFF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE016828 Genomic DNA. Translation: AAO90086.1.
AJ543641 Genomic DNA. Translation: CAD66594.1.
RefSeqiNP_819572.1. NC_002971.3.
WP_010957646.1. NC_002971.4.

Genome annotation databases

EnsemblBacteriaiAAO90086; AAO90086; CBU_0540.
GeneIDi1208425.
KEGGicbu:CBU_0540.
PATRICifig|227377.7.peg.533.

Similar proteinsi

Entry informationi

Entry nameiSMC_COXBU
AccessioniPrimary (citable) accession number: Q81ZL2
Secondary accession number(s): Q7C3I8
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 31, 2011
Last sequence update: June 1, 2003
Last modified: October 25, 2017
This is version 97 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Coxiella burnetii
    Coxiella burnetii (strain RSA 493): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families