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Protein
Submitted name:

DNA repair exonuclease

Gene

sbcD

Organism
Bacillus anthracis
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

ExonucleaseImported, Hydrolase, Nuclease

Enzyme and pathway databases

BioCyciBANT260799:GJAJ-2264-MONOMER.
BANT261594:GJ7F-2342-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA repair exonucleaseImported
Submitted name:
Exonuclease SbcCD, D subunitImported
Submitted name:
Nuclease sbcCD subunit DImported
Submitted name:
Putative exonuclease SbcDImported
Gene namesi
Name:sbcDImported
Ordered Locus Names:GBAA_2359Imported
ORF Names:AB163_12000Imported, AB164_03495Imported, AB165_04885Imported, AB166_17300Imported, AB167_04810Imported, AB168_28330Imported, AB169_10115Imported, AB170_27575Imported, AB171_05795Imported, AB893_11695Imported, ADK18_11500Imported, ADT20_25225Imported, ADT21_25830Imported, BASH2_03514Imported, BF27_5219Imported
OrganismiBacillus anthracisImported
Taxonomic identifieri1392 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillusBacillus cereus group
ProteomesiUP000037132 Componenti: Unassembled WGS sequence UP000036891 Componenti: Unassembled WGS sequence UP000037502 Componenti: Unassembled WGS sequence UP000037044 Componenti: Unassembled WGS sequence UP000036858 Componenti: Unassembled WGS sequence UP000000594 Componenti: Chromosome UP000037383 Componenti: Unassembled WGS sequence UP000037060 Componenti: Unassembled WGS sequence UP000037296 Componenti: Unassembled WGS sequence UP000037367 Componenti: Unassembled WGS sequence UP000037483 Componenti: Unassembled WGS sequence UP000031920 Componenti: Chromosome UP000037079 Componenti: Unassembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi198094.BA_2359.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini1 – 193193MetallophosInterPro annotationAdd
BLAST
Domaini272 – 35786SbcD_CInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiCOG0420. LUCA.
ENOG4107RFY. Bacteria.
HOGENOMiHOG000026260.
KOiK03547.
OMAiAITHEFK.
OrthoDBiEOG60CWP4.

Family and domain databases

Gene3Di3.60.21.10. 1 hit.
InterProiIPR004843. Calcineurin-like_PHP_apaH.
IPR029052. Metallo-depent_PP-like.
IPR004593. SbcD.
IPR026843. SbcD_C.
[Graphical view]
PfamiPF00149. Metallophos. 1 hit.
PF12320. SbcD_C. 1 hit.
[Graphical view]
SUPFAMiSSF56300. SSF56300. 1 hit.
TIGRFAMsiTIGR00619. sbcd. 1 hit.

Sequencei

Sequence statusi: Complete.

Q81QR0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKLFHTADWH LGKLVHGVYM TEDQKIVLDQ FVQAVEEEKP DAVIIAGDLY
60 70 80 90 100
DRAIPPTEAV DLLNDVLQKI VIDLQTPVIA VAGNHDSPDR IHFGSSLMKK
110 120 130 140 150
QGLFIVGQFQ FPYEPIILND EHGEVHFHLV PYADPSIVRH VLKNEDVRSH
160 170 180 190 200
DDAMRIFMNE LSETMDKEAR HVFVGHAFVT SAGEAEENTS DAERPLSIGG
210 220 230 240 250
AEYVNSHYFD KFHYTALGHL HQAHFVRNET IRYSGSPLAY SISEEKHKKG
260 270 280 290 300
YYIVELNEQG EATIEKRLLT PRRKMRTVEA KIDELLQHPV SEDYVFVKLL
310 320 330 340 350
DENPVLQPME KIRSVYPNAM HVERSIQRRE FTESNEATVS RHKTDDLSLL
360 370 380
KAFYKEMKGL DLSEEKERLF VEVLQTVQER EGERG
Length:385
Mass (Da):44,257
Last modified:June 1, 2003 - v1
Checksum:i254C9D01339289AC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017334 Genomic DNA. Translation: AAT31478.1.
CP009902 Genomic DNA. Translation: AJH90995.1.
CP012519 Genomic DNA. Translation: ALC34473.1.
AP014833 Genomic DNA. Translation: BAR76921.1.
LFYJ01000069 Genomic DNA. Translation: KOM58792.1.
LFYH01000015 Genomic DNA. Translation: KOM66332.1.
LFYG01000010 Genomic DNA. Translation: KOM74303.1.
LFYI01000006 Genomic DNA. Translation: KOM79858.1.
LFYF01000007 Genomic DNA. Translation: KOM85673.1.
LGIE01000015 Genomic DNA. Translation: KOM93152.1.
LGIF01000036 Genomic DNA. Translation: KON02838.1.
LGIG01000005 Genomic DNA. Translation: KON19752.1.
LGID01000062 Genomic DNA. Translation: KON23358.1.
LHUN01000032 Genomic DNA. Translation: KOR56474.1.
LHUO01000023 Genomic DNA. Translation: KOR64733.1.
LGCD01000025 Genomic DNA. Translation: KOS28444.1.
RefSeqiWP_000765133.1. NZ_LHUO01000023.1.

Genome annotation databases

EnsemblBacteriaiAAT31478; AAT31478; GBAA_2359.
AJG29072; AJG29072; TM00_11710.
AJH90995; AJH90995; BF27_5219.
KEGGibanh:HYU01_11745.
bar:GBAA_2359.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017334 Genomic DNA. Translation: AAT31478.1.
CP009902 Genomic DNA. Translation: AJH90995.1.
CP012519 Genomic DNA. Translation: ALC34473.1.
AP014833 Genomic DNA. Translation: BAR76921.1.
LFYJ01000069 Genomic DNA. Translation: KOM58792.1.
LFYH01000015 Genomic DNA. Translation: KOM66332.1.
LFYG01000010 Genomic DNA. Translation: KOM74303.1.
LFYI01000006 Genomic DNA. Translation: KOM79858.1.
LFYF01000007 Genomic DNA. Translation: KOM85673.1.
LGIE01000015 Genomic DNA. Translation: KOM93152.1.
LGIF01000036 Genomic DNA. Translation: KON02838.1.
LGIG01000005 Genomic DNA. Translation: KON19752.1.
LGID01000062 Genomic DNA. Translation: KON23358.1.
LHUN01000032 Genomic DNA. Translation: KOR56474.1.
LHUO01000023 Genomic DNA. Translation: KOR64733.1.
LGCD01000025 Genomic DNA. Translation: KOS28444.1.
RefSeqiWP_000765133.1. NZ_LHUO01000023.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi198094.BA_2359.

Protocols and materials databases

DNASUi1084068.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAT31478; AAT31478; GBAA_2359.
AJG29072; AJG29072; TM00_11710.
AJH90995; AJH90995; BF27_5219.
KEGGibanh:HYU01_11745.
bar:GBAA_2359.

Phylogenomic databases

eggNOGiCOG0420. LUCA.
ENOG4107RFY. Bacteria.
HOGENOMiHOG000026260.
KOiK03547.
OMAiAITHEFK.
OrthoDBiEOG60CWP4.

Enzyme and pathway databases

BioCyciBANT260799:GJAJ-2264-MONOMER.
BANT261594:GJ7F-2342-MONOMER.

Family and domain databases

Gene3Di3.60.21.10. 1 hit.
InterProiIPR004843. Calcineurin-like_PHP_apaH.
IPR029052. Metallo-depent_PP-like.
IPR004593. SbcD.
IPR026843. SbcD_C.
[Graphical view]
PfamiPF00149. Metallophos. 1 hit.
PF12320. SbcD_C. 1 hit.
[Graphical view]
SUPFAMiSSF56300. SSF56300. 1 hit.
TIGRFAMsiTIGR00619. sbcd. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Ames ancestorImported and Ames AncestorImported.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 2002013094Imported.
  3. "Bacillus anthracis whole genome sequence."
    Okutani A., Morikawa S., Inoue S.
    Submitted (MAR-2015) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: Shikan-NIIDImported.
  4. "Draft genome sequence of Bacillus anthracis Larissa associated with a case of cutaneous anthrax in Greece."
    Grass G., Hanczaruk M., Antwerpen M.H.
    Submitted (JUN-2015) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: LarissaImported.
  5. "Draft genome sequence of Bacillus anthracis strain K0021."
    Consortium for Microbial Forensics and Genomics (microFORGE)
    Knight B.M., O'Shea R.M., Jones B.A., Roberts D.P., Lin D., Hari K., Winegar R.A.
    Submitted (JUN-2015) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K0021Imported.
  6. "Draft genome sequence of Bacillus anthracis strain K1129."
    Consortium for Microbial Forensics and Genomics (microFORGE)
    Knight B.M., O'Shea R.M., Jones B.A., Roberts D.P., Lin D., Hari K., Winegar R.A.
    Submitted (JUN-2015) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K1129Imported.
  7. "Draft genome sequence of Bacillus anthracis strain K1285."
    Consortium for Microbial Forensics and Genomics (microFORGE)
    Knight B.M., O'Shea R.M., Jones B.A., Roberts D.P., Lin D., Hari K., Winegar R.A.
    Submitted (JUN-2015) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K1285Imported.
  8. "Draft genome sequence of Bacillus anthracis strain K2129."
    Consortium for Microbial Forensics and Genomics (microFORGE)
    Knight B.M., O'Shea R.M., Jones B.A., Roberts D.P., Lin D., Hari K., Winegar R.A.
    Submitted (JUN-2015) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K2129Imported.
  9. "Draft genome sequence of Bacillus anthracis strain K2883."
    Consortium for Microbial Forensics and Genomics (microFORGE)
    Knight B.M., O'Shea R.M., Jones B.A., Roberts D.P., Lin D., Hari K., Winegar R.A.
    Submitted (JUN-2015) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K2883Imported.
  10. "Draft genome sequence of Bacillus anthracis strain K3974."
    Consortium for Microbial Forensics and Genomics (microFORGE)
    Knight B.M., O'Shea R.M., Jones B.A., Roberts D.P., Lin D., Hari K., Winegar R.A.
    Submitted (JUN-2015) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K3974Imported.
  11. "Draft genome sequence of Bacillus anthracis strain K4834."
    Consortium for Microbial Forensics and Genomics (microFORGE)
    Knight B.M., O'Shea R.M., Jones B.A., Roberts D.P., Lin D., Hari K., Winegar R.A.
    Submitted (JUN-2015) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K4834Imported.
  12. "Draft genome sequence of Bacillus anthracis strain K8215."
    Consortium for Microbial Forensics and Genomics (microFORGE)
    Knight B.M., O'Shea R.M., Jones B.A., Roberts D.P., Lin D., Hari K., Winegar R.A.
    Submitted (JUN-2015) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K8215Imported.
  13. "Draft genome sequence of Bacillus anthracis strain PAK-1."
    Consortium for Microbial Forensics and Genomics (microFORGE)
    Knight B.M., O'Shea R.M., Jones B.A., Roberts D.P., Lin D., Hari K., Winegar R.A.
    Submitted (JUN-2015) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PAK-1Imported.
  14. Hoefler B.C., Straight P.D.
    Submitted (JUN-2015) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: K0021Imported, K1129Imported, K1285Imported, K2129Imported, K2883Imported, K3974Imported, K4834Imported, K8215Imported and PAK-1Imported.
  15. "Draft genome sequence of Bacillus anthracis strain A0021."
    Consortium for Microbial Forensics and Genomics (microFORGE)
    Knight B.M., O'Shea R.M., Jones B.A., Roberts D.P., Lin D., Hari K., Winegar R.A.
    Submitted (JUL-2015) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: A0021Imported.
  16. "Draft genome sequence of Bacillus anthracis strain A0389."
    Consortium for Microbial Forensics and Genomics (microFORGE)
    Knight B.M., O'Shea R.M., Jones B.A., Roberts D.P., Lin D., Hari K., Winegar R.A.
    Submitted (JUL-2015) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: A0389Imported.
  17. "Draft genome sequences of two South African Bacillus anthracis strains."
    Lekota K.E., Mafofo J., Madoroba E., Rees J., van Heerden H., Muchadeyi F.C.
    Submitted (JUL-2015) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: 3631_1CImported.
  18. "MeaNS - Measles Nucleotide Surveillance Program."
    Tran T., Druce J.
    Submitted (JUL-2015) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: A0021Imported and A0389Imported.

Entry informationi

Entry nameiQ81QR0_BACAN
AccessioniPrimary (citable) accession number: Q81QR0
Secondary accession number(s): E9R3N4
, E9R3N5, Q6HYX9, Q6KSX8
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: January 20, 2016
This is version 101 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.