Q811V1 (Q811V1_RAT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Homeodomain protein LMX1b EMBL AAO17712.1

Gene names

Name:

Lmx1b RGD 620843

Organism

Rattus norvegicus (Rat) EMBL AAO17712.1

Taxonomic identifier

10116 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length	105 AA.
Sequence status	Fragment.
Protein existence	Evidence at transcript level

Ontologies

Keywords
Domain	Homeobox EMBL AAO17712.1
Gene Ontology (GO)
Biological_process	cell death Inferred from electronic annotation. Source: Compara cell proliferation Inferred from electronic annotation. Source: Compara central nervous system neuron development Inferred from electronic annotation. Source: Compara cerebellum morphogenesis Inferred from electronic annotation. Source: Compara collagen fibril organization Inferred from electronic annotation. Source: Compara dopaminergic neuron differentiation Inferred from electronic annotation. Source: Compara dorsal/ventral pattern formation Inferred from electronic annotation. Source: Compara limb morphogenesis Inferred from electronic annotation. Source: Compara midbrain development Inferred from electronic annotation. Source: Compara neuron migration Inferred from electronic annotation. Source: Compara organ growth Inferred from electronic annotation. Source: Compara positive regulation of transcription from RNA polymerase II promoter Inferred from electronic annotation. Source: Compara trabecular meshwork development Inferred from electronic annotation. Source: Compara
Molecular_function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL AAO17712.1
	Non-terminal residue	105	1	EMBL AAO17712.1

Sequences

	Sequence		Length	Mass (Da)
	Q811V1 [UniParc]. Last modified June 1, 2003. Version 1. Checksum: B8B4B76859DC8580	FASTA	105	11,829
	10 20 30 40 50 60 ERQLRKGDEF VLKEGQLLCK GDYEKEKDLL SSVSPDESDS VKSEDEDGDM KPAKGQGSQN 70 80 90 100 KGSGDDGKDP RRPKRPRTIL TTQQRRAFKA SFEVSSKPCR KVRET

References

[1]	"Homeobox gene characterization in adult rat dorsal root ganglia." Vogelaar C.F., Hoekman M.F.M., Burbach J.P.H. Submitted (OCT-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: Wistar EMBL AAO17712.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AY169317 mRNA. Translation: AAO17712.1.
IPI	IPI00373601.
UniGene	Rn.92364.
3D structure databases
ProteinModelPortal	Q811V1.
ModBase	Search...
Protein-protein interaction databases
STRING	10116.ENSRNOP00000022953. Q811V1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Phylogenomic databases
eggNOG	NOG243427.
HOGENOM	HOG000231629.
InParanoid	Q811V1.
OrthoDB	EOG4QFWDN.
Gene expression databases
ArrayExpress	Q811V1.
Genevestigator	Q811V1.
Family and domain databases
Gene3D	1.10.10.60. 1 hit.
InterPro	IPR009057. Homeodomain-like. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q811V1_RAT

Accession

Primary (citable) accession number: Q811V1

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 2003
Last sequence update:	June 1, 2003
Last modified:	April 3, 2013
This is version 60 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)