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Protein
Submitted name:

Atxn3 protein

Gene

Atxn3

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Atxn3 proteinImported
Gene namesi
Name:Atxn3Imported
Synonyms:MjdImported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:1099442. Atxn3.

PTM / Processingi

Proteomic databases

PaxDbiQ810M8.

Expressioni

Gene expression databases

BgeeiQ810M8.
GenevisibleiQ810M8. MM.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000021606.

Family & Domainsi

Phylogenomic databases

eggNOGiKOG2935. Eukaryota.
ENOG4111G4B. LUCA.
HOGENOMiHOG000006034.
HOVERGENiHBG025648.
KOiK11863.

Family and domain databases

InterProiIPR006155. Josephin.
IPR003903. UIM_dom.
[Graphical view]
PfamiPF02099. Josephin. 1 hit.
PF02809. UIM. 2 hits.
[Graphical view]
PRINTSiPR01233. JOSEPHIN.
SMARTiSM01246. Josephin. 1 hit.
SM00726. UIM. 2 hits.
[Graphical view]
PROSITEiPS50957. JOSEPHIN. 1 hit.
PS50330. UIM. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q810M8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
TGAEGWGRGR SCWRGLLRAG AVGSRQINME SIFHEKQEGS LCAQHCLNNL
60 70 80 90 100
LQGEYFSPVE LSSIAHQLDE EERLRMAEGG VTSEDYRTFL QQPSGNMDDS
110 120 130 140 150
GFFSIQVISN ALKVWGLELI LFNSPEYQRL RIDPINERSF ICNYKEHWFT
160 170 180 190 200
VRKLGKQWFN LNSLLTGPEL ISDTYLALFL AQLQQEGYSI FVVKGDLPDC
210 220 230 240 250
EADQLLQMIK VQQMHRPKLI GEELAHLKEQ SALKADLERV LEAADGSGIF
260 270 280 290 300
DEDEDDLQRA LAISRQEIDM EDEEADLRRA IQLSMQGSSR SMCENSPQTS
310
SPDLSSEELR RRREAYFEK
Length:319
Mass (Da):36,389
Last modified:June 1, 2003 - v1
Checksum:iB8B150A9FA36745C
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC049743 mRNA. Translation: AAH49743.1.
RefSeqiNP_001161386.1. NM_001167914.1.
NP_083981.2. NM_029705.3.
UniGeneiMm.271914.

Genome annotation databases

GeneIDi110616.
KEGGimmu:110616.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC049743 mRNA. Translation: AAH49743.1.
RefSeqiNP_001161386.1. NM_001167914.1.
NP_083981.2. NM_029705.3.
UniGeneiMm.271914.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000021606.

Proteomic databases

PaxDbiQ810M8.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi110616.
KEGGimmu:110616.

Organism-specific databases

CTDi4287.
MGIiMGI:1099442. Atxn3.

Phylogenomic databases

eggNOGiKOG2935. Eukaryota.
ENOG4111G4B. LUCA.
HOGENOMiHOG000006034.
HOVERGENiHBG025648.
KOiK11863.

Miscellaneous databases

ChiTaRSiAtxn3. mouse.
SOURCEiSearch...

Gene expression databases

BgeeiQ810M8.
GenevisibleiQ810M8. MM.

Family and domain databases

InterProiIPR006155. Josephin.
IPR003903. UIM_dom.
[Graphical view]
PfamiPF02099. Josephin. 1 hit.
PF02809. UIM. 2 hits.
[Graphical view]
PRINTSiPR01233. JOSEPHIN.
SMARTiSM01246. Josephin. 1 hit.
SM00726. UIM. 2 hits.
[Graphical view]
PROSITEiPS50957. JOSEPHIN. 1 hit.
PS50330. UIM. 2 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
    , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: TestisImported.

Entry informationi

Entry nameiQ810M8_MOUSE
AccessioniPrimary (citable) accession number: Q810M8
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: June 8, 2016
This is version 78 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.