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Protein
Submitted name:

Cadherin-4

Gene

Cdh4

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandCalciumSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Cadherin-4Imported
Submitted name:
Cdh4 proteinImported
Gene namesi
Name:Cdh4Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 2

Organism-specific databases

MGIiMGI:99218 Cdh4

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 20Sequence analysisAdd BLAST20
ChainiPRO_501431190621 – 334Sequence analysisAdd BLAST314

Proteomic databases

TopDownProteomicsiQ80ZV4

Expressioni

Gene expression databases

BgeeiENSMUSG00000000305

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini30 – 121Cadherin_proInterPro annotationAdd BLAST92
Domaini187 – 272CAInterPro annotationAdd BLAST86

Keywords - Domaini

RepeatSAAS annotation, SignalSequence analysis, Transmembrane, Transmembrane helixSAAS annotation

Phylogenomic databases

eggNOGiKOG3594 Eukaryota
ENOG410XQHI LUCA
GeneTreeiENSGT00760000118906
HOGENOMiHOG000202453
HOVERGENiHBG067298
KOiK06797

Family and domain databases

InterProiView protein in InterPro
IPR002126 Cadherin
IPR015919 Cadherin-like
IPR020894 Cadherin_CS
IPR014868 Cadherin_pro_dom
PfamiView protein in Pfam
PF00028 Cadherin, 1 hit
PF08758 Cadherin_pro, 1 hit
PRINTSiPR00205 CADHERIN
SMARTiView protein in SMART
SM00112 CA, 1 hit
SM01055 Cadherin_pro, 1 hit
SUPFAMiSSF49313 SSF49313, 3 hits
PROSITEiView protein in PROSITE
PS00232 CADHERIN_1, 1 hit

Sequencei

Sequence statusi: Complete.

Q80ZV4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTTGSVLPLL LLGLSGALRA HREDLTVREA CKAGFSEEGY TALISPNVLE
60 70 80 90 100
GEKLLKVEFS SCVGTKGMQY ETNSLDFKVG ADGTVFATRE LKIPSEQVAF
110 120 130 140 150
TVTARERQSA EQWAAMVRLL VAQTSSAHSE HKKGQTVALD PSQPPNDTLL
160 170 180 190 200
PWPQHQSSGG LRRQKRDWVI PPINVPENSR GPFPQQLVRI RSDKDNDIPI
210 220 230 240 250
RYSITGVGAD QPPMEVFNID SMSGRMYVTR PMDREERASY HLRAHAVDMN
260 270 280 290 300
GNKVENPIDL YIYVIDMNDN RPEFINQVYN GSVDEGSKPG EASWGPHALH
310 320 330
GTWVWDCNVQ HCCPVSHTSR YRESAESRHC SNRE
Length:334
Mass (Da):37,315
Last modified:June 1, 2003 - v1
Checksum:iEAF5FBD829D5BBBE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL663028 Genomic DNA No translation available.
AL663067 Genomic DNA No translation available.
AL669921 Genomic DNA No translation available.
BX000474 Genomic DNA No translation available.
BX537257 Genomic DNA No translation available.
BC047991 mRNA Translation: AAH47991.1
RefSeqiNP_001303652.1, NM_001316723.1
NP_033997.1, NM_009867.3
UniGeneiMm.184711

Genome annotation databases

EnsembliENSMUST00000108911; ENSMUSP00000104539; ENSMUSG00000000305
GeneIDi12561
KEGGimmu:12561
UCSCiuc008ohu.2 mouse

Entry informationi

Entry nameiQ80ZV4_MOUSE
AccessioniPrimary (citable) accession number: Q80ZV4
Entry historyiIntegrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: April 25, 2018
This is version 124 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported