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Q80YE4

- LMTK1_MOUSE

UniProt

Q80YE4 - LMTK1_MOUSE

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Protein
Serine/threonine-protein kinase LMTK1
Gene
Aatk, Aatyk, Kiaa0641, Lmr1, Lmtk1
Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 5 out of 5 - Experimental evidence at protein leveli

Functioni

May be involved in neuronal differentiation By similarity.

Catalytic activityi

ATP + a protein = ADP + a phosphoprotein.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei157 – 1571ATP By similarity
Active sitei254 – 2541Proton acceptor By similarity

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi132 – 1409ATP By similarity

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. protein binding Source: MGI
  3. protein serine/threonine kinase activity Source: UniProtKB-KW
  4. protein tyrosine kinase activity Source: MGI

GO - Biological processi

  1. Rab protein signal transduction Source: MGI
  2. apoptotic process Source: MGI
  3. brain development Source: MGI
  4. negative regulation of axon extension Source: MGI
  5. neuron apoptotic process Source: MGI
  6. peptidyl-tyrosine autophosphorylation Source: MGI
  7. protein autophosphorylation Source: MGI
Complete GO annotation...

Keywords - Molecular functioni

Kinase, Serine/threonine-protein kinase, Transferase

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Serine/threonine-protein kinase LMTK1 (EC:2.7.11.1)
Alternative name(s):
Apoptosis-associated tyrosine kinase
Short name:
AATYK
Brain apoptosis-associated tyrosine kinase
Lemur tyrosine kinase 1
Gene namesi
Name:Aatk
Synonyms:Aatyk, Kiaa0641, Lmr1, Lmtk1
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Unplaced

Organism-specific databases

MGIiMGI:1197518. Aatk.

Subcellular locationi

Membrane; Single-pass type I membrane protein. Cytoplasm. Cytoplasmperinuclear region By similarity. Cell projectiondendrite. Cell projectionaxon. Cell projectiongrowth cone
Note: Predominantly perinuclear By similarity.1 Publication
Isoform 2 : Membrane
Note: Peripheral membrane protein.1 Publication
Isoform 3 : Membrane; Single-pass type I membrane protein 1 Publication

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei32 – 5221Helical; Reviewed prediction
Add
BLAST

GO - Cellular componenti

  1. axonal growth cone Source: MGI
  2. dendrite Source: UniProtKB-SubCell
  3. endoplasmic reticulum Source: MGI
  4. integral component of membrane Source: UniProtKB-KW
  5. perinuclear region of cytoplasm Source: MGI
  6. recycling endosome Source: MGI
Complete GO annotation...

Keywords - Cellular componenti

Cell projection, Cytoplasm, Membrane

Pathology & Biotechi

Mutagenesis

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Mutagenesisi254 – 2541D → V: Significant decrease in autophosphorylation. 2 Publications

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 13651365Serine/threonine-protein kinase LMTK1
PRO_0000248301Add
BLAST

Post-translational modificationi

Autophosphorylated. Phosphorylated by CDK5 By similarity.2 Publications

Keywords - PTMi

Phosphoprotein

Proteomic databases

PaxDbiQ80YE4.
PRIDEiQ80YE4.

PTM databases

PhosphoSiteiQ80YE4.

Expressioni

Tissue specificityi

Expressed in brain, and, to a lower extent, in kidney, heart, lung and skeletal muscle. In the brain, expressed in the olfactory bulb, cerebellum, striatum, hippocampal formation, thalamus, hypothalamus, and pontine nuclei (at protein level).4 Publications

Developmental stagei

Isoform 2 is predominantly expressed in adult stage. Isoform 3 is up-regulated during postnatal development.1 Publication

Inductioni

Up-regulated during the apoptotic death of myeloid cells induced by cytokine withdrawal, such as IL3, and during G-CSF-induced terminal differentiation of myeloblasts to granulocytes.2 Publications

Gene expression databases

CleanExiMM_AATK.
GenevestigatoriQ80YE4.

Interactioni

Subunit structurei

Interacts with CDK5 By similarity.

Protein-protein interaction databases

IntActiQ80YE4. 1 interaction.

Structurei

3D structure databases

ProteinModelPortaliQ80YE4.
SMRiQ80YE4. Positions 98-396.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini126 – 396271Protein kinase
Add
BLAST

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi84 – 874Poly-Ala

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiCOG0515.
HOVERGENiHBG080533.
InParanoidiQ80YE4.
KOiK17480.

Family and domain databases

InterProiIPR011009. Kinase-like_dom.
IPR000719. Prot_kinase_dom.
IPR017441. Protein_kinase_ATP_BS.
IPR001245. Ser-Thr/Tyr_kinase_cat_dom.
IPR008266. Tyr_kinase_AS.
[Graphical view]
PfamiPF07714. Pkinase_Tyr. 1 hit.
[Graphical view]
PRINTSiPR00109. TYRKINASE.
SUPFAMiSSF56112. SSF56112. 1 hit.
PROSITEiPS00107. PROTEIN_KINASE_ATP. 1 hit.
PS50011. PROTEIN_KINASE_DOM. 1 hit.
PS00109. PROTEIN_KINASE_TYR. 1 hit.
[Graphical view]

Sequences (4)i

Sequence statusi: Complete.

This entry describes 4 isoformsi produced by alternative splicing. Align

Isoform 1 (identifier: Q80YE4-1) [UniParc]FASTAAdd to Basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

MSSSFFNPSF AFSSHFDPDG APLSELSWSS SLAVVAVSFS GIFTVVILML     50
ACLCCKKGGI GFKEFENAEG DEYVADFSEQ GSPAAAAQTG PDVYVLPLTE 100
VSLPMAKQPG RSVQLLKSTD LGRHSLLYLK EIGHGWFGKV FLGEVHSGVS 150
GTQVVVKELK VSASVQEQMQ FLEEAQPYRA LQHSNLLQCL AQCAEVTPYL 200
LVMEFCPLGD LKGYLRSCRV TESMAPDPLT LQRMACEVAC GVLHLHRHNY 250
VHSDLALRNC LLTADLTVKV GDYGLSHCKY REDYLVTADQ LWVPLRWIAP 300
ELVDEVHGNL LVVDQTKSSN VWSLGVTIWE LFELGAQPYP QHSDRQVLAY 350
AVREQQLKLP KPQLQLALSD RWYEVMQFCW LQPEQRPTAE EVHLLLSYLC 400
AKGTTELEEE FERRWRSLRP GGSTGLGSGS AAPAAATAAS AELTAASSFP 450
LLERFTSDGF HVDSDDVLTV TETSHGLNFE YKWEAGCGAE EYPPSGAASS 500
PGSAARLQEL CAPDSSPPGV VPVLSAHSPS VGSEYFIRLE GAVPAAGHDP 550
DCAGCAPSPQ AVTDQDNNSE ESTVASLAME PLLGHAPPTE GLWGPCDHHS 600
HRRQGSPCPS RSPSPGTPML PAEDIDWGVA TFCPPFFDDP LGASPSGSPG 650
AQPSPSDEEP EEGKVGLAAQ CGHWSSNMSA NNNSASRDPE SWDPGYVSSF 700
TDSYRDDCSS LEQTPRASPE VGHLLSQEDP RDFLPGLVAV SPGQEPSRPF 750
NLLPLCPAKG LAPAACLITS PWTEGAVGGA ENPIVEPKLA QEAEGSAEPQ 800
LPLPSVPSPS CEGASLPSEE ASAPDILPAS PTPAAGSWVT VPEPAPTLES 850
SGSSLGQEAP SSEDEDTTEA TSGVFTDLSS DGPHTEKSGI VPALRSLQKQ 900
VGTPDSLDSL DIPSSASDGG CEVLSPSAAG PPGGQPRAVD SGYDTENYES 950
PEFVLKEAHE SSEPEAFGEP ASEGESPGPD PLLSVSLGGL SKKSPYRDSA 1000
YFSDLDAESE PTFGPEKHSG IQDSQKEQDL RSPPSPGHQS VQAFPRSAVS 1050
SEVLSPPQQS EEPLPEVPRP EPLGAQGPVG VQPVPGPSHS KCFPLTSVPL 1100
ISEGSGTEPQ GPSGQLSGRA QQGQMGNPST PRSPLCLALP GHPGALEGRP 1150
EEDEDTEDSE ESDEELRCYS VQEPSEDSEE EPPAVPVVVA ESQSARNLRS 1200
LLKMPSLLSE AFCDDLERKK KAVSFFDDVT VYLFDQESPT RETGEPFPST 1250
KESLPTFLEG GPSSPSATGL PLRAGHSPDS SAPEPGSRFE WDGDFPLVPG 1300
KAALVTELDP ADPVLAAPPT PAAPFSRFTV SPTPASRFSI THISDSDAQS 1350
VGGPAAGAGG RYTEA 1365
Length:1,365
Mass (Da):144,607
Last modified:June 1, 2003 - v1
Checksum:i051A53505EDAF502
GO
Isoform 2 (identifier: Q80YE4-2) [UniParc]FASTAAdd to Basket

Also known as: AATYK1A

The sequence of this isoform differs from the canonical sequence as follows:
     1-48: Missing.

Show »
Length:1,317
Mass (Da):139,551
Checksum:i578C9F925CCF9408
GO
Isoform 3 (identifier: Q80YE4-3) [UniParc]FASTAAdd to Basket

Also known as: AATYK1B

The sequence of this isoform differs from the canonical sequence as follows:
     1-1: M → MLIALLALAM

Show »
Length:1,374
Mass (Da):145,517
Checksum:iC1292D7311141628
GO
Isoform 4 (identifier: Q80YE4-4) [UniParc]FASTAAdd to Basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-168: Missing.
     1354-1365: PAAGAGGRYTEA → MSVVGAEVEQRDTTNGDL

Note: No experimental confirmation available.

Show »
Length:1,203
Mass (Da):127,544
Checksum:i747436FFC8A3B4BF
GO

Sequence cautioni

The sequence BAC41437.2 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.

Alternative sequence

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Alternative sequencei1 – 168168Missing in isoform 4.
VSP_020229Add
BLAST
Alternative sequencei1 – 4848Missing in isoform 2.
VSP_020230Add
BLAST
Alternative sequencei1 – 11M → MLIALLALAM in isoform 3.
VSP_020231
Alternative sequencei1354 – 136512PAAGA…RYTEA → MSVVGAEVEQRDTTNGDL in isoform 4.
VSP_020232Add
BLAST

Sequence conflict

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti270 – 2701V → D in BAC29541. 1 Publication
Sequence conflicti345 – 3451R → G in BAC29541. 1 Publication
Sequence conflicti345 – 3451R → G in BAE27789. 1 Publication
Sequence conflicti345 – 3451R → G in BAE33045. 1 Publication
Sequence conflicti345 – 3451R → G in AAH80846. 1 Publication
Sequence conflicti773 – 7731T → K in BAE33045. 1 Publication
Sequence conflicti988 – 9881G → S in BAE27789. 1 Publication
Sequence conflicti1317 – 13171A → S in BAC29541. 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF011908 mRNA. Translation: AAB71837.1.
AY236858 mRNA. Translation: AAO92350.1.
AY236859 mRNA. Translation: AAO92351.1.
AB288871 mRNA. Translation: BAF64832.1.
AB093253 mRNA. Translation: BAC41437.2. Different initiation.
AK036705 mRNA. Translation: BAC29541.1.
AK147239 mRNA. Translation: BAE27789.1.
AK155100 mRNA. Translation: BAE33045.1.
BC080846 mRNA. Translation: AAH80846.1.
CCDSiCCDS25725.1. [Q80YE4-2]
CCDS56826.1. [Q80YE4-3]
PIRiT03748.
RefSeqiNP_001185714.1. NM_001198785.1.
NP_001185716.1. NM_001198787.1.
NP_031403.2. NM_007377.4.
UniGeneiMm.6826.

Genome annotation databases

GeneIDi11302.
KEGGimmu:11302.
UCSCiuc007mrn.3. mouse. [Q80YE4-4]

Keywords - Coding sequence diversityi

Alternative splicing

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF011908 mRNA. Translation: AAB71837.1 .
AY236858 mRNA. Translation: AAO92350.1 .
AY236859 mRNA. Translation: AAO92351.1 .
AB288871 mRNA. Translation: BAF64832.1 .
AB093253 mRNA. Translation: BAC41437.2 . Different initiation.
AK036705 mRNA. Translation: BAC29541.1 .
AK147239 mRNA. Translation: BAE27789.1 .
AK155100 mRNA. Translation: BAE33045.1 .
BC080846 mRNA. Translation: AAH80846.1 .
CCDSi CCDS25725.1. [Q80YE4-2 ]
CCDS56826.1. [Q80YE4-3 ]
PIRi T03748.
RefSeqi NP_001185714.1. NM_001198785.1.
NP_001185716.1. NM_001198787.1.
NP_031403.2. NM_007377.4.
UniGenei Mm.6826.

3D structure databases

ProteinModelPortali Q80YE4.
SMRi Q80YE4. Positions 98-396.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

IntActi Q80YE4. 1 interaction.

PTM databases

PhosphoSitei Q80YE4.

Proteomic databases

PaxDbi Q80YE4.
PRIDEi Q80YE4.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 11302.
KEGGi mmu:11302.
UCSCi uc007mrn.3. mouse. [Q80YE4-4 ]

Organism-specific databases

CTDi 9625.
MGIi MGI:1197518. Aatk.
Rougei Search...

Phylogenomic databases

eggNOGi COG0515.
HOVERGENi HBG080533.
InParanoidi Q80YE4.
KOi K17480.

Miscellaneous databases

NextBioi 278582.
PROi Q80YE4.
SOURCEi Search...

Gene expression databases

CleanExi MM_AATK.
Genevestigatori Q80YE4.

Family and domain databases

InterProi IPR011009. Kinase-like_dom.
IPR000719. Prot_kinase_dom.
IPR017441. Protein_kinase_ATP_BS.
IPR001245. Ser-Thr/Tyr_kinase_cat_dom.
IPR008266. Tyr_kinase_AS.
[Graphical view ]
Pfami PF07714. Pkinase_Tyr. 1 hit.
[Graphical view ]
PRINTSi PR00109. TYRKINASE.
SUPFAMi SSF56112. SSF56112. 1 hit.
PROSITEi PS00107. PROTEIN_KINASE_ATP. 1 hit.
PS50011. PROTEIN_KINASE_DOM. 1 hit.
PS00109. PROTEIN_KINASE_TYR. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "AATYK: a novel tyrosine kinase induced during growth arrest and apoptosis of myeloid cells."
    Gaozza E., Baker S.J., Vora R.K., Reddy E.P.
    Oncogene 15:3127-3135(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 2), INDUCTION, TISSUE SPECIFICITY.
    Tissue: Bone marrow.
  2. "Characterization of an alternatively spliced AATYK mRNA: expression pattern of AATYK in the brain and neuronal cells."
    Baker S.J., Sumerson R., Reddy C.D., Berrebi A.S., Flynn D.C., Reddy E.P.
    Oncogene 20:1015-1021(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 1 AND 3), INDUCTION, TISSUE SPECIFICITY.
    Strain: 129/SvJ.
    Tissue: Brain.
  3. "Structural and functional analysis of the apoptosis-associated tyrosine kinase (AATYK) family."
    Tomomura M., Morita N., Yoshikawa F., Konishi A., Akiyama H., Furuichi T., Kamiguchi H.
    Neuroscience 148:510-521(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 3), ALTERNATIVE SPLICING (ISOFORM 2), SUBCELLULAR LOCATION, TISSUE SPECIFICITY, DEVELOPMENTAL STAGE, PHOSPHORYLATION, MUTAGENESIS OF ASP-254.
    Tissue: Brain.
  4. "Prediction of the coding sequences of mouse homologues of KIAA gene: I. The complete nucleotide sequences of 100 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries."
    Okazaki N., Kikuno R., Ohara R., Inamoto S., Hara Y., Nagase T., Ohara O., Koga H.
    DNA Res. 9:179-188(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
    Tissue: Brain.
  5. Okazaki N., Kikuno R., Nagase T., Ohara O., Koga H.
    Submitted (OCT-2002) to the EMBL/GenBank/DDBJ databases
    Cited for: SEQUENCE REVISION.
  6. "The transcriptional landscape of the mammalian genome."
    Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
    , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
    Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 2 AND 4).
    Strain: C57BL/6J and NOD.
    Tissue: Bone.
  7. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
    Strain: C57BL/6.
    Tissue: Brain.
  8. "Characterization of the apoptosis-associated tyrosine kinase (AATYK) expressed in the CNS."
    Tomomura M., Fernandez-Gonzales A., Yano R., Yuzaki M.
    Oncogene 20:1022-1032(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: TISSUE SPECIFICITY, PHOSPHORYLATION, MUTAGENESIS OF ASP-254.

Entry informationi

Entry nameiLMTK1_MOUSE
AccessioniPrimary (citable) accession number: Q80YE4
Secondary accession number(s): A6BLY8
, O35211, Q3U2U5, Q3UHR8, Q66JN3, Q80YE3, Q8CB63, Q8CHE2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 5, 2006
Last sequence update: June 1, 2003
Last modified: July 9, 2014
This is version 92 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. Human and mouse protein kinases
    Human and mouse protein kinases: classification and index
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi