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Protein

Calmodulin-binding transcription activator 2

Gene

Camta2

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at transcript leveli

Functioni

Transcription activator. May act as tumor suppressor (By similarity).By similarity

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
DNA bindingi30 – 160131CG-1PROSITE-ProRule annotationAdd
BLAST

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Activator

Keywords - Biological processi

Transcription, Transcription regulation

Keywords - Ligandi

DNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Calmodulin-binding transcription activator 2
Gene namesi
Name:Camta2
Synonyms:Kiaa0909
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 11

Organism-specific databases

MGIiMGI:2135957. Camta2.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 12081208Calmodulin-binding transcription activator 2PRO_0000235822Add
BLAST

Proteomic databases

MaxQBiQ80Y50.
PaxDbiQ80Y50.
PRIDEiQ80Y50.

PTM databases

iPTMnetiQ80Y50.
PhosphoSiteiQ80Y50.

Expressioni

Gene expression databases

BgeeiQ80Y50.
CleanExiMM_CAMTA2.
ExpressionAtlasiQ80Y50. baseline and differential.
GenevisibleiQ80Y50. MM.

Interactioni

Subunit structurei

May interact with calmodulin.Curated

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000043792.

Structurei

3D structure databases

ProteinModelPortaliQ80Y50.
SMRiQ80Y50. Positions 542-623.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini540 – 62283IPT/TIGAdd
BLAST
Repeati717 – 75034ANK 1Add
BLAST
Repeati762 – 79231ANK 2Add
BLAST
Repeati796 – 82631ANK 3Add
BLAST
Domaini1054 – 108330IQ 1PROSITE-ProRule annotationAdd
BLAST
Domaini1107 – 113630IQ 2PROSITE-ProRule annotationAdd
BLAST

Motif

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Motifi78 – 869Nuclear localization signalPROSITE-ProRule annotation

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi294 – 30512Ser-richAdd
BLAST

Sequence similaritiesi

Belongs to the CAMTA family.Curated
Contains 3 ANK repeats.Curated
Contains 1 CG-1 DNA-binding domain.PROSITE-ProRule annotation
Contains 1 IPT/TIG domain.Curated
Contains 2 IQ domains.PROSITE-ProRule annotation

Keywords - Domaini

ANK repeat, Repeat

Phylogenomic databases

eggNOGiKOG0520. Eukaryota.
ENOG410XS5M. LUCA.
GeneTreeiENSGT00390000001446.
HOVERGENiHBG058078.
InParanoidiQ80Y50.
OMAiSHQEAGP.
OrthoDBiEOG74R1PX.
PhylomeDBiQ80Y50.
TreeFamiTF323452.

Family and domain databases

Gene3Di1.25.40.20. 1 hit.
InterProiIPR020683. Ankyrin_rpt-contain_dom.
IPR005559. CG-1_dom.
IPR014756. Ig_E-set.
IPR002909. IPT.
IPR000048. IQ_motif_EF-hand-BS.
[Graphical view]
PfamiPF03859. CG-1. 1 hit.
PF01833. TIG. 1 hit.
[Graphical view]
SMARTiSM01076. CG-1. 1 hit.
[Graphical view]
SUPFAMiSSF48403. SSF48403. 1 hit.
SSF81296. SSF81296. 1 hit.
PROSITEiPS50297. ANK_REP_REGION. 1 hit.
PS51437. CG_1. 1 hit.
PS50096. IQ. 1 hit.
[Graphical view]

Sequences (5)i

Sequence statusi: Complete.

This entry describes 5 isoformsi produced by alternative splicing. AlignAdd to basket

Isoform 1 (identifier: Q80Y50-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

        10         20         30         40         50
MNTKDTTEVA ENSHHLKIFL PKKLLECLPR CPLLPPERLR WNTNEEIASY
60 70 80 90 100
LITFEKHDEW LSCAPKTRPQ NGSIILYNRK KVKYRKDGYL WKKRKDGKTT
110 120 130 140 150
REDHMKLKVQ GMEPVSWQCL YGCYVHSSIV PTFHRRCYWL LQNPDIVLVH
160 170 180 190 200
YLNVPALEDC GKGCSPIFCS ISSDRREWLK WSREELLGQL KPMFHGIKWS
210 220 230 240 250
CGNGAEEFSV EQLVQQILDT HPTKPAPRTH ACLCSGGLGS GSLTHKCSST
260 270 280 290 300
KHRIISPKVE PRALALASIS HSKPPEPPPL IAPLPPELPK AHTSPSSSSS
310 320 330 340 350
SSSSSGFAEP LEIRPSPPTS RGGSSRGGTA ILLLTGLEQR AGGLTPTRHL
360 370 380 390 400
APQAEPRPPV SLAVVVGSEP SAPPAPPSPA FDPDRFLNSP QRGQTYGGGQ
410 420 430 440 450
GVNPDFPEAE GTHTPCPALE PAAALEPQAA ARGLAPQLGA NGRRGNKFFI
460 470 480 490 500
QDDDSGEELK GPGTVPPVPS SPPSSPSSPT ALPPSGRATR GEALFGGSAG
510 520 530 540 550
SSSELEPFSL SSFPDLMGEL ISDEAPGVPA PAPQLSPALN AITDFSPEWS
560 570 580 590 600
YPEGGVKVLI TGPWTEAAEH YSCVFDHIAV PASLVQPGVL RCYCPAHEVG
610 620 630 640 650
LVSLQVAGRE GPLSASVLFE YRARRFLSLP STQLDWLSLD DSQFRMSILE
660 670 680 690 700
RLEQMEKRMA EIAAAGQAPG QGPEAPPIQD EGQGPGFEAR VVVLVESMIP
710 720 730 740 750
RSTWRGPERL IHGSPFRGMS LLHLAAAQGY ARLIETLSQW RSVETGSLDL
760 770 780 790 800
EQEVDPLNVD HFSCTPLMWA CALGHLEAAV LLFCWNRQAL SIPDSLGRLP
810 820 830 840 850
LSVAHSRGHV RLARCLEELQ RQELSVEHPL ALSPPSSSPD TGLSSASSPS
860 870 880 890 900
ELSDGTFSVT SAYSSAPDGS PPPAPPLASD ISMEMIPGQL SCGAPETPLL
910 920 930 940 950
LMDYEATNSK EPAPSPCGPP LAQDNGAAPE DADSPPAVDV IPVDMISLAK
960 970 980 990 1000
QIIDATPERI KREDFSEFPD AGASPREHTG TVGLSETMSW LASYLENVDH
1010 1020 1030 1040 1050
FPSSAPPSEL PFERGRLAIP PAPSWAEFLS ASTSGKMESD FALLTLSDHE
1060 1070 1080 1090 1100
QRELYEAARV IQTAFRKYKG RRLKEQQEVA AAVIQRCYRK YKQLTWIALK
1110 1120 1130 1140 1150
FALYKKMTQA AILIQSKFRS YYEQKRFQQS RRAAVLIQQH YRSYRRRPGP
1160 1170 1180 1190 1200
PHRPSGPLPA RNKGTFLTKK QDQAARKIMR FLRRCRHRMR ELKQNQELEG

LPQPGLAT
Length:1,208
Mass (Da):132,010
Last modified:June 1, 2003 - v1
Checksum:iF32D05F8C5A3590C
GO
Isoform 2 (identifier: Q80Y50-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     114-118: Missing.

Show »
Length:1,203
Mass (Da):131,412
Checksum:iB3F0DB6909322F70
GO
Isoform 3 (identifier: Q80Y50-3) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-10: MNTKDTTEVA → MAAAAVTRGTPG
     114-118: Missing.
     1094-1100: Missing.

Show »
Length:1,198
Mass (Da):130,579
Checksum:i1CF2720DAE9455C2
GO
Isoform 4 (identifier: Q80Y50-4) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     114-142: Missing.
     1094-1100: Missing.

Show »
Length:1,172
Mass (Da):127,659
Checksum:i09D06F1D2E68BD94
GO
Isoform 5 (identifier: Q80Y50-5) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     913-1001: APSPCGPPLA...ASYLENVDHF → PPPGLTRFLP...FAARALVFQG
     1002-1208: Missing.

Show »
Length:1,001
Mass (Da):107,857
Checksum:i29903B372A6F0751
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti235 – 2351S → G in BAE40898 (PubMed:16141072).Curated
Sequence conflicti545 – 5451F → L in BAE40898 (PubMed:16141072).Curated

Alternative sequence

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Alternative sequencei1 – 1010MNTKDTTEVA → MAAAAVTRGTPG in isoform 3. 1 PublicationVSP_018494
Alternative sequencei114 – 14229Missing in isoform 4. 1 PublicationVSP_018495Add
BLAST
Alternative sequencei114 – 1185Missing in isoform 2 and isoform 3. 3 PublicationsVSP_018496
Alternative sequencei913 – 100189APSPC…NVDHF → PPPGLTRFLPSGCASSFGLR LQKTHAPHICIFSCDLRSPA CTFSISPFLPAPDSDLPDLP YLFVRESLMNVSASVPTAAF AARALVFQG in isoform 5. 1 PublicationVSP_018497Add
BLAST
Alternative sequencei1002 – 1208207Missing in isoform 5. 1 PublicationVSP_018498Add
BLAST
Alternative sequencei1094 – 11007Missing in isoform 3 and isoform 4. 1 PublicationVSP_018499

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK169118 mRNA. Translation: BAE40898.1.
AL596117 Genomic DNA. Translation: CAI25176.1.
AL596117 Genomic DNA. Translation: CAI25177.2.
AL596117 Genomic DNA. Translation: CAI25178.1.
AL596117 Genomic DNA. Translation: CAQ12359.1.
CR933736, CR933735 Genomic DNA. Translation: CAM28112.1.
CR933735, CR933736 Genomic DNA. Translation: CAM28144.1.
BC027039 mRNA. Translation: AAH27039.1.
BC027385 mRNA. Translation: AAH27385.1.
BC049133 mRNA. Translation: AAH49133.1.
BC056395 mRNA. Translation: AAH56395.1.
AK122400 mRNA. Translation: BAC65682.1.
CCDSiCCDS24963.1. [Q80Y50-1]
CCDS56786.1. [Q80Y50-4]
CCDS56788.1. [Q80Y50-2]
RefSeqiNP_001177305.1. NM_001190376.1. [Q80Y50-2]
NP_001177308.1. NM_001190379.1. [Q80Y50-4]
NP_835217.1. NM_178116.4. [Q80Y50-1]
UniGeneiMm.473726.

Genome annotation databases

EnsembliENSMUST00000036299; ENSMUSP00000043792; ENSMUSG00000040712. [Q80Y50-1]
ENSMUST00000100933; ENSMUSP00000098493; ENSMUSG00000040712. [Q80Y50-3]
ENSMUST00000108544; ENSMUSP00000104184; ENSMUSG00000040712. [Q80Y50-2]
ENSMUST00000108545; ENSMUSP00000104185; ENSMUSG00000040712. [Q80Y50-4]
GeneIDi216874.
KEGGimmu:216874.
UCSCiuc007jwa.2. mouse. [Q80Y50-4]
uc007jwc.2. mouse. [Q80Y50-1]
uc007jwd.2. mouse. [Q80Y50-2]

Keywords - Coding sequence diversityi

Alternative splicing

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK169118 mRNA. Translation: BAE40898.1.
AL596117 Genomic DNA. Translation: CAI25176.1.
AL596117 Genomic DNA. Translation: CAI25177.2.
AL596117 Genomic DNA. Translation: CAI25178.1.
AL596117 Genomic DNA. Translation: CAQ12359.1.
CR933736, CR933735 Genomic DNA. Translation: CAM28112.1.
CR933735, CR933736 Genomic DNA. Translation: CAM28144.1.
BC027039 mRNA. Translation: AAH27039.1.
BC027385 mRNA. Translation: AAH27385.1.
BC049133 mRNA. Translation: AAH49133.1.
BC056395 mRNA. Translation: AAH56395.1.
AK122400 mRNA. Translation: BAC65682.1.
CCDSiCCDS24963.1. [Q80Y50-1]
CCDS56786.1. [Q80Y50-4]
CCDS56788.1. [Q80Y50-2]
RefSeqiNP_001177305.1. NM_001190376.1. [Q80Y50-2]
NP_001177308.1. NM_001190379.1. [Q80Y50-4]
NP_835217.1. NM_178116.4. [Q80Y50-1]
UniGeneiMm.473726.

3D structure databases

ProteinModelPortaliQ80Y50.
SMRiQ80Y50. Positions 542-623.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000043792.

PTM databases

iPTMnetiQ80Y50.
PhosphoSiteiQ80Y50.

Proteomic databases

MaxQBiQ80Y50.
PaxDbiQ80Y50.
PRIDEiQ80Y50.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000036299; ENSMUSP00000043792; ENSMUSG00000040712. [Q80Y50-1]
ENSMUST00000100933; ENSMUSP00000098493; ENSMUSG00000040712. [Q80Y50-3]
ENSMUST00000108544; ENSMUSP00000104184; ENSMUSG00000040712. [Q80Y50-2]
ENSMUST00000108545; ENSMUSP00000104185; ENSMUSG00000040712. [Q80Y50-4]
GeneIDi216874.
KEGGimmu:216874.
UCSCiuc007jwa.2. mouse. [Q80Y50-4]
uc007jwc.2. mouse. [Q80Y50-1]
uc007jwd.2. mouse. [Q80Y50-2]

Organism-specific databases

CTDi23125.
MGIiMGI:2135957. Camta2.
RougeiSearch...

Phylogenomic databases

eggNOGiKOG0520. Eukaryota.
ENOG410XS5M. LUCA.
GeneTreeiENSGT00390000001446.
HOVERGENiHBG058078.
InParanoidiQ80Y50.
OMAiSHQEAGP.
OrthoDBiEOG74R1PX.
PhylomeDBiQ80Y50.
TreeFamiTF323452.

Miscellaneous databases

ChiTaRSiCamta2. mouse.
PROiQ80Y50.
SOURCEiSearch...

Gene expression databases

BgeeiQ80Y50.
CleanExiMM_CAMTA2.
ExpressionAtlasiQ80Y50. baseline and differential.
GenevisibleiQ80Y50. MM.

Family and domain databases

Gene3Di1.25.40.20. 1 hit.
InterProiIPR020683. Ankyrin_rpt-contain_dom.
IPR005559. CG-1_dom.
IPR014756. Ig_E-set.
IPR002909. IPT.
IPR000048. IQ_motif_EF-hand-BS.
[Graphical view]
PfamiPF03859. CG-1. 1 hit.
PF01833. TIG. 1 hit.
[Graphical view]
SMARTiSM01076. CG-1. 1 hit.
[Graphical view]
SUPFAMiSSF48403. SSF48403. 1 hit.
SSF81296. SSF81296. 1 hit.
PROSITEiPS50297. ANK_REP_REGION. 1 hit.
PS51437. CG_1. 1 hit.
PS50096. IQ. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The transcriptional landscape of the mammalian genome."
    Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
    , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
    Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 3 AND 4).
    Strain: C57BL/6J.
    Tissue: Brain and Embryonic heart.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], ALTERNATIVE SPLICING.
    Strain: C57BL/6J.
  3. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1; 2 AND 5).
    Strain: C57BL/6J.
    Tissue: Brain, Eye, Mammary gland and Mammary tumor.
  4. "Prediction of the coding sequences of mouse homologues of KIAA gene: II. The complete nucleotide sequences of 400 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries."
    Okazaki N., Kikuno R., Ohara R., Inamoto S., Aizawa H., Yuasa S., Nakajima D., Nagase T., Ohara O., Koga H.
    DNA Res. 10:35-48(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 21-1208 (ISOFORM 2).
    Tissue: Brain.

Entry informationi

Entry nameiCMTA2_MOUSE
AccessioniPrimary (citable) accession number: Q80Y50
Secondary accession number(s): B0QZH5
, Q3TFK0, Q5SX54, Q5SX68, Q6PHS5, Q80TP1, Q8R0D9, Q8R2N5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 16, 2006
Last sequence update: June 1, 2003
Last modified: June 8, 2016
This is version 112 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.