Q80XL8 (Q80XL8_MOUSE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Cngb1 protein EMBL AAH45114.1

Gene names

Name:

Cngb1 MGI 2664102

Organism

Mus musculus (Mouse) EMBL AAH45114.1

Taxonomic identifier

10090 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus › Mus

Protein attributes

Sequence length	866 AA.
Sequence status	Fragment.
Protein existence	Evidence at transcript level

Ontologies

Gene Ontology (GO)
Biological_process	photoreceptor cell maintenance Inferred from mutant phenotype PubMed 15634774. Source: MGI phototransduction Inferred from mutant phenotype PubMed 15634774. Source: MGI protein localization to organelle Inferred from mutant phenotype PubMed 16980309. Source: MGI sensory perception of smell Inferred from mutant phenotype PubMed 16980309. Source: MGI
Cellular_component	membrane Inferred from direct assay PubMed 15634774. Source: MGI
Molecular_function	cyclic nucleotide-gated ion channel activity Inferred from mutant phenotype PubMed 16980309. Source: MGI
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL AAH45114.1

Sequences

	Sequence		Length	Mass (Da)
	Q80XL8 [UniParc]. Last modified June 1, 2003. Version 1. Checksum: CACC4AD8EB6DEE2A	FASTA	866	97,427
	10 20 30 40 50 60 EEEPIVLLDS CLVVQADVDE CQLERTPSEL ASIQELPEEK EEKEEEKEEE KEEEEEKKEE 70 80 90 100 110 120 EVEKKEEGEA TNSTVPATKE HPELQVEDTD ADSGPLIPEE TLPPPERPPP SPVKSDTLTV 130 140 150 160 170 180 PGAAAAGHRK KLPSQDDEAE ELKALSPAES PVVAWSDPTT PQEADGQDRA ASTASQNSAI 190 200 210 220 230 240 INDRLQELVK MFKERTEKVK EKLIDPDVTS DEESPKPSPA KKAPEPDPAQ KPAEAEVAEE 250 260 270 280 290 300 EHYCDMLCCK FKRRPLKMYR FPQSIDPLTN LMYILWLFFV VLAWNWNCWL IPVRWAFPYQ 310 320 330 340 350 360 RADNIHFWLL MDYLCDFIYL LDITVFQMRL QFVKGGDIIT DKKEMRNNYL KSRRFKMDLL 370 380 390 400 410 420 CLLPLDFLYL KLGINPLLRL PRCLKYMAFF EFNNRLEAIL SKAYVYRVIR TTAYLLYSLH 430 440 450 460 470 480 LNSCLYYWAS AFQGIGSTHW VYDGVGNSYI RCYYWAVKTL ITIGGLPDPQ TLFEIVFQLL 490 500 510 520 530 540 NYFTGVFAFS VMIGQMRDVV GAATAGQTYY RSCMDSTVKY MNFYKIPRSV QNRVKTWYEY 550 560 570 580 590 600 TWHSQGMLDE SELMVQLPDK MRLDLAIDVN YSIVSKVALF QGCDRQMIFD MLKRLRSVVY 610 620 630 640 650 660 LPNDYVCKKG EIGREMYIIQ AGQVQVLGGP DGKAVLVTLK AGSVFGEISL LAVGGGNRRT 670 680 690 700 710 720 ANVVAHGFTN LFILDKKDLN EILVHYPESQ KLLRKKARRM LRNNNKPKEE KSVLILPPRA 730 740 750 760 770 780 GTPKLFNAAL AAAGKMGPRG AKGGKLAHLR ARLKELAALE AAARQQQLLE QAKSSQEAGG 790 800 810 820 830 840 EEGSGATDQP APQEPPEPKD PPKPPGPPEP SAQSSPPPAS AKPEESTGEA AGPPEPSVRI 850 860 RVSPGPDPGE QTLSVEVLEE KKEGAE

References

[1]

"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M. , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J. Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Eye EMBL AAH45114.1.

+

Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BC045114 mRNA. Translation: AAH45114.1.
IPI	IPI00989919.
RefSeq	NP_001182342.1. NM_001195413.1.
UniGene	Mm.484049. Mm.490128.
3D structure databases
HSSP	HSSP built from PDB template 1Q43 based on UniProtKB O88703.
ProteinModelPortal	Q80XL8.
ModBase	Search...
Protein-protein interaction databases
STRING	Q80XL8.
Protein family/group databases
TCDB	1.A.1.5.4. voltage-gated ion channel (VIC) superfamily.
PTM databases
PhosphoSite	Q80XL8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	333329.
KEGG	mmu:333329.
UCSC	uc009myb.2. mouse.
Organism-specific databases
CTD	1258.
MGI	MGI:2664102. Cngb1.
Phylogenomic databases
HOGENOM	HOG000231425.
HOVERGEN	HBG051038.
InParanoid	Q80XL8.
KO	K04952.
Gene expression databases
ArrayExpress	Q80XL8.
Bgee	Q80XL8.
Genevestigator	Q80XL8.
Family and domain databases
Gene3D	2.60.120.10. 1 hit.
InterPro	IPR018490. cNMP-bd-like. IPR018488. cNMP-bd_CS. IPR000595. cNMP-bd_dom. IPR014710. RmlC-like_jellyroll. [Graphical view]
Pfam	PF00027. cNMP_binding. 1 hit. [Graphical view]
SMART	SM00100. cNMP. 1 hit. [Graphical view]
SUPFAM	SSF51206. cNMP_binding. 1 hit.
PROSITE	PS00888. CNMP_BINDING_1. 1 hit. PS00889. CNMP_BINDING_2. 1 hit. PS50042. CNMP_BINDING_3. 1 hit. [Graphical view]
ProtoNet	Search...
Other
NextBio	399967.
SOURCE	Search...

Entry information

Entry name

Q80XL8_MOUSE

Accession

Primary (citable) accession number: Q80XL8

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 2003
Last sequence update:	June 1, 2003
Last modified:	April 3, 2013
This is version 68 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)