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Q80XL8 (Q80XL8_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 75. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:Cngb1 EMBL AAH45114.1 MGI 2664102
OrganismMus musculus (Mouse) EMBL AAH45114.1
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Protein attributes

Sequence length866 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL AAH45114.1

Sequences

Sequence LengthMass (Da)Tools
Q80XL8 [UniParc].

Last modified June 1, 2003. Version 1.
Checksum: CACC4AD8EB6DEE2A

FASTA86697,427
        10         20         30         40         50         60 
EEEPIVLLDS CLVVQADVDE CQLERTPSEL ASIQELPEEK EEKEEEKEEE KEEEEEKKEE 

        70         80         90        100        110        120 
EVEKKEEGEA TNSTVPATKE HPELQVEDTD ADSGPLIPEE TLPPPERPPP SPVKSDTLTV 

       130        140        150        160        170        180 
PGAAAAGHRK KLPSQDDEAE ELKALSPAES PVVAWSDPTT PQEADGQDRA ASTASQNSAI 

       190        200        210        220        230        240 
INDRLQELVK MFKERTEKVK EKLIDPDVTS DEESPKPSPA KKAPEPDPAQ KPAEAEVAEE 

       250        260        270        280        290        300 
EHYCDMLCCK FKRRPLKMYR FPQSIDPLTN LMYILWLFFV VLAWNWNCWL IPVRWAFPYQ 

       310        320        330        340        350        360 
RADNIHFWLL MDYLCDFIYL LDITVFQMRL QFVKGGDIIT DKKEMRNNYL KSRRFKMDLL 

       370        380        390        400        410        420 
CLLPLDFLYL KLGINPLLRL PRCLKYMAFF EFNNRLEAIL SKAYVYRVIR TTAYLLYSLH 

       430        440        450        460        470        480 
LNSCLYYWAS AFQGIGSTHW VYDGVGNSYI RCYYWAVKTL ITIGGLPDPQ TLFEIVFQLL 

       490        500        510        520        530        540 
NYFTGVFAFS VMIGQMRDVV GAATAGQTYY RSCMDSTVKY MNFYKIPRSV QNRVKTWYEY 

       550        560        570        580        590        600 
TWHSQGMLDE SELMVQLPDK MRLDLAIDVN YSIVSKVALF QGCDRQMIFD MLKRLRSVVY 

       610        620        630        640        650        660 
LPNDYVCKKG EIGREMYIIQ AGQVQVLGGP DGKAVLVTLK AGSVFGEISL LAVGGGNRRT 

       670        680        690        700        710        720 
ANVVAHGFTN LFILDKKDLN EILVHYPESQ KLLRKKARRM LRNNNKPKEE KSVLILPPRA 

       730        740        750        760        770        780 
GTPKLFNAAL AAAGKMGPRG AKGGKLAHLR ARLKELAALE AAARQQQLLE QAKSSQEAGG 

       790        800        810        820        830        840 
EEGSGATDQP APQEPPEPKD PPKPPGPPEP SAQSSPPPAS AKPEESTGEA AGPPEPSVRI 

       850        860 
RVSPGPDPGE QTLSVEVLEE KKEGAE 

« Hide

References

[1]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M. expand/collapse author list , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Eye EMBL AAH45114.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BC045114 mRNA. Translation: AAH45114.1.
RefSeqNP_001182342.1. NM_001195413.1.
UniGeneMm.484049.
Mm.491649.

3D structure databases

ProteinModelPortalQ80XL8.
ModBaseSearch...
MobiDBSearch...

Protein family/group databases

TCDB1.A.1.5.4. the voltage-gated ion channel (vic) superfamily.

PTM databases

PhosphoSiteQ80XL8.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID333329.
KEGGmmu:333329.

Organism-specific databases

CTD1258.
MGIMGI:2664102. Cngb1.

Phylogenomic databases

HOGENOMHOG000231425.
HOVERGENHBG051038.
InParanoidQ80XL8.
KOK04952.

Gene expression databases

BgeeQ80XL8.
GenevestigatorQ80XL8.

Family and domain databases

Gene3D2.60.120.10. 1 hit.
InterProIPR018490. cNMP-bd-like.
IPR018488. cNMP-bd_CS.
IPR000595. cNMP-bd_dom.
IPR014710. RmlC-like_jellyroll.
[Graphical view]
PfamPF00027. cNMP_binding. 1 hit.
[Graphical view]
SMARTSM00100. cNMP. 1 hit.
[Graphical view]
SUPFAMSSF51206. SSF51206. 1 hit.
PROSITEPS00888. CNMP_BINDING_1. 1 hit.
PS00889. CNMP_BINDING_2. 1 hit.
PS50042. CNMP_BINDING_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio399967.
SOURCESearch...

Entry information

Entry nameQ80XL8_MOUSE
AccessionPrimary (citable) accession number: Q80XL8
Entry history
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: April 16, 2014
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)