Q80XI3 (IF4G3_MOUSE) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 29, 2013.
Version 92.
History...
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Eukaryotic translation initiation factor 4 gamma 3 Short name=eIF-4-gamma 3 Short name=eIF-4G 3 Short name=eIF4G 3 Alternative name(s): eIF-4-gamma II Short name=eIF4GII | ||
| Gene names |
| ||
| Organism | Mus musculus (Mouse) [Reference proteome] | ||
| Taxonomic identifier | 10090 [NCBI] | ||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus › Mus![]() |
Protein attributes
| Sequence length | 1579 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Probable component of the protein complex eIF4F, which is involved in the recognition of the mRNA cap, ATP-dependent unwinding of 5'-terminal secondary structure and recruitment of mRNA to the ribosome. Thought to be a functional homolog of EIF4G1 By similarity. |
| Subunit structure | Interacts with EIF4A, EIF4E, eIF3 and PABPC1. Part of a complex with EIF4E. eIF4F is a multi-subunit complex, the composition of which varies with external and internal environmental conditions. It is composed of at least EIF4A, EIF4E and EIF4G1/EIF4G3. EIF4G1/EIF4G3 interacts through its C-terminus with the serine/threonine kinases MKNK1, and with MKNK2. Appears to act as a scaffold protein, holding these enzymes in place to phosphorylate eIF4E. Non-phosphorylated EIF4EBP1 competes with EIF4G1/EIFG3 to interact with EIF4E; insulin stimulated MAP-kinase (MAPK1 and MAPK3) phosphorylation of EIF4EBP1 causes dissociation of the complex allowing EIF4G1/EIF4G3 to bind and consequent initiation of translation. EIF4G1/EIF4G3 interacts with PABPC1 to bring about circularization of the mRNA By similarity. |
| Sequence similarities | Belongs to the eukaryotic initiation factor 4G family. Contains 5 HEAT repeats. Contains 1 MI domain. Contains 1 MIF4G domain. Contains 1 W2 domain. |
| Sequence caution | The sequence AAH23898.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened. The sequence AAH23898.1 differs from that shown. Reason: Contaminating sequence. Sequence of unknown origin in the N-terminal part. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Protein biosynthesis Translation regulation |
| Coding sequence diversity | Alternative splicing |
| Domain | Coiled coil Repeat |
| Ligand | RNA-binding |
| Molecular function | Initiation factor |
| PTM | Phosphoprotein |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological_process | RNA metabolic process Inferred from electronic annotation. Source: InterPro positive regulation of meiosis IInferred from mutant phenotype PubMed 20430745. Source: MGI positive regulation of protein phosphorylationInferred from mutant phenotype PubMed 20430745. Source: MGI positive regulation of translationInferred from mutant phenotype PubMed 20430745. Source: MGI spermatogenesisInferred from mutant phenotype PubMed 20430745. Source: MGI |
| Molecular_function | DNA binding Inferred from electronic annotation. Source: InterPro translation initiation factor activityInferred from electronic annotation. Source: UniProtKB-KW |
| Complete GO annotation... | |
Alternative products
| This entry describes 4 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q80XI3-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q80XI3-2) The sequence of this isoform differs from the canonical sequence as follows: 1084-1102: Missing. | ||||||
| Isoform 3 (identifier: Q80XI3-3) The sequence of this isoform differs from the canonical sequence as follows: 11-11: F → FAAGPRPAHHQF | ||||||
| Note: No experimental confirmation available. | ||||||
| Isoform 4 (identifier: Q80XI3-4) The sequence of this isoform differs from the canonical sequence as follows: 10-10: P → PFAAGPRPAHHQGGFRPIQ 1084-1102: Missing. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 1579 | 1579 | Eukaryotic translation initiation factor 4 gamma 3 | PRO_0000213330 | |||||
Regions | |||||||||
| Repeat | 740 – 778 | 39 | HEAT 1 | ||||||
| Domain | 750 – 978 | 229 | MIF4G | ||||||
| Repeat | 779 – 826 | 48 | HEAT 2 | ||||||
| Repeat | 827 – 900 | 74 | HEAT 3 | ||||||
| Repeat | 901 – 939 | 39 | HEAT 4 | ||||||
| Repeat | 940 – 979 | 40 | HEAT 5 | ||||||
| Domain | 1215 – 1337 | 123 | MI | ||||||
| Domain | 1410 – 1579 | 170 | W2 | ||||||
| Region | 134 – 162 | 29 | PABPC1-binding By similarity | ||||||
| Region | 614 – 625 | 12 | EIF4E-binding By similarity | ||||||
| Region | 694 – 1014 | 321 | eIF3/EIF4A-binding By similarity | ||||||
| Region | 1427 – 1579 | 153 | EIF4A-binding By similarity | ||||||
| Region | 1565 – 1579 | 15 | Necessary but not sufficient for MKNK1-binding By similarity | ||||||
| Coiled coil | 989 – 1018 | 30 | Potential | ||||||
| Coiled coil | 1154 – 1176 | 23 | Potential | ||||||
| Coiled coil | 1406 – 1438 | 33 | Potential | ||||||
Amino acid modifications | |||||||||
| Modified residue | 230 | 1 | Phosphoserine By similarity | ||||||
| Modified residue | 232 | 1 | Phosphoserine By similarity | ||||||
| Modified residue | 240 | 1 | Phosphoserine Ref.6 | ||||||
| Modified residue | 267 | 1 | Phosphoserine Ref.4 | ||||||
| Modified residue | 470 | 1 | Phosphoserine Ref.5 | ||||||
| Modified residue | 472 | 1 | Phosphoserine Ref.5 | ||||||
| Modified residue | 490 | 1 | Phosphoserine By similarity | ||||||
| Modified residue | 884 | 1 | Phosphoserine By similarity | ||||||
| Modified residue | 1150 | 1 | Phosphoserine; by CaMK1 By similarity | ||||||
Natural variations | |||||||||
| Alternative sequence | 10 | 1 | P → PFAAGPRPAHHQGGFRPIQ in isoform 4. | VSP_026029 | |||||
| Alternative sequence | 11 | 1 | F → FAAGPRPAHHQF in isoform 3. | VSP_010490 | |||||
| Alternative sequence | 1084 – 1102 | 19 | Missing in isoform 2 and isoform 4. | VSP_010491 | |||||
Experimental info | |||||||||
| Sequence conflict | 183 | 1 | Missing in CF743072. Ref.2 | ||||||
| Sequence conflict | 410 | 1 | A → G in CF743072. Ref.2 | ||||||
| Sequence conflict | 492 | 1 | A → P in CB522417. Ref.2 | ||||||
| Sequence conflict | 1324 | 1 | E → G in BAC26452. Ref.1 | ||||||
| Sequence conflict | 1324 | 1 | E → G in AAH72600. Ref.3 | ||||||
Sequences
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References
| [1] | "The transcriptional landscape of the mammalian genome." Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J. Hayashizaki Y.Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 1-217 AND 807-1579 (ISOFORM 2), NUCLEOTIDE SEQUENCE OF 1-135 (ISOFORM 3). Strain: C57BL/6J. Tissue: Adipose tissue, Head and Oviduct. |
| [2] | The MGC Project Team Submitted (OCT-2003) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 164-492. |
| [3] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1; 2 AND 4). Strain: C57BL/6 and FVB/N. Tissue: Brain, Colon, Kidney, Liver and Mammary tumor. |
| [4] | "Qualitative and quantitative analyses of protein phosphorylation in naive and stimulated mouse synaptosomal preparations." Munton R.P., Tweedie-Cullen R., Livingstone-Zatchej M., Weinandy F., Waidelich M., Longo D., Gehrig P., Potthast F., Rutishauser D., Gerrits B., Panse C., Schlapbach R., Mansuy I.M. Mol. Cell. Proteomics 6:283-293(2007) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-267, MASS SPECTROMETRY. Tissue: Brain cortex. |
| [5] | "Large-scale phosphorylation analysis of mouse liver." Villen J., Beausoleil S.A., Gerber S.A., Gygi S.P. Proc. Natl. Acad. Sci. U.S.A. 104:1488-1493(2007) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-470 AND SER-472, MASS SPECTROMETRY. Tissue: Liver. |
| [6] | "The phagosomal proteome in interferon-gamma-activated macrophages." Trost M., English L., Lemieux S., Courcelles M., Desjardins M., Thibault P. Immunity 30:143-154(2009) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-240, MASS SPECTROMETRY. Tissue: Macrophage. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AK029440 mRNA. Translation: BAC26452.1. AK050887 mRNA. Translation: BAC34445.1. AK054068 mRNA. Translation: BAC35644.1. CB522417 mRNA. No translation available. CF743072 mRNA. No translation available. BC023898 mRNA. Translation: AAH23898.1. Different initiation. BC047531 mRNA. Translation: AAH47531.1. BC048848 mRNA. Translation: AAH48848.1. BC057913 mRNA. Translation: AAH57913.1. BC072600 mRNA. Translation: AAH72600.1. |
| IPI | IPI00417153. IPI00417154. IPI00417155. IPI00626707. |
| RefSeq | NP_766291.2. NM_172703.3. |
| UniGene | Mm.268903. Mm.407375. Mm.489798. |
3D structure databases | |
| ProteinModelPortal | Q80XI3. |
| SMR | Q80XI3. Positions 136-161, 740-981, 1208-1545. |
| ModBase | Search... |
Protein-protein interaction databases | |
| MINT | MINT-1864762. |
PTM databases | |
| PhosphoSite | Q80XI3. |
Proteomic databases | |
| PaxDb | Q80XI3. |
| PRIDE | Q80XI3. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENSMUST00000084214; ENSMUSP00000081232; ENSMUSG00000028760. |
| GeneID | 230861. |
| KEGG | mmu:230861. |
| UCSC | uc008vka.2. mouse. uc008vkb.2. mouse. |
Organism-specific databases | |
| CTD | 8672. |
| MGI | MGI:1923935. Eif4g3. |
Phylogenomic databases | |
| eggNOG | NOG301289. |
| GeneTree | ENSGT00530000063038. |
| HOVERGEN | HBG052083. |
| KO | K03260. |
| OrthoDB | EOG45X7V7. |
Gene expression databases | |
| ArrayExpress | Q80XI3. |
| Bgee | Q80XI3. |
| Genevestigator | Q80XI3. |
| GermOnline | ENSMUSG00000028760. Mus musculus. |
Family and domain databases | |
| Gene3D | 1.25.40.180. 3 hits. |
| InterPro | IPR016024. ARM-type_fold. IPR003891. Initiation_fac_eIF4g_MI. IPR016021. MIF4-like_typ_1/2/3. IPR003890. MIF4G-like_typ-3. IPR003307. W2_domain. [Graphical view] |
| Pfam | PF02847. MA3. 1 hit. PF02854. MIF4G. 1 hit. PF02020. W2. 1 hit. [Graphical view] |
| SMART | SM00515. eIF5C. 1 hit. SM00544. MA3. 1 hit. SM00543. MIF4G. 1 hit. [Graphical view] |
| SUPFAM | SSF48371. ARM-type_fold. 3 hits. |
| PROSITE | PS50077. HEAT_REPEAT. False negative. PS51366. MI. 1 hit. PS51363. W2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| ChiTaRS | EIF4G3. mouse. |
| NextBio | 380218. |
| SOURCE | Search... |
Entry information
| Entry name | IF4G3_MOUSE | ||||||||
| Accession | Primary (citable) accession number: Q80XI3 Secondary accession number(s): Q6GQV5 Q8CIH0 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
Relevant documents
| MGD cross-references Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with
