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Protein
Submitted name:

Toll-like receptor 9

Gene

Tlr9

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 5 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionReceptorImported

Names & Taxonomyi

Protein namesi
Submitted name:
Toll-like receptor 9Imported
Gene namesi
Name:Tlr9Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus

Organism-specific databases

RGDi631352. Tlr9.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Interactioni

GO - Molecular functioni

Structurei

3D structure databases

ProteinModelPortaliQ80XA5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini239 – 387TIRInterPro annotationAdd BLAST149

Keywords - Domaini

Leucine-rich repeatSAAS annotation, RepeatSAAS annotation

Phylogenomic databases

eggNOGiKOG4641. Eukaryota.
COG4886. LUCA.
PhylomeDBiQ80XA5.

Family and domain databases

Gene3Di3.40.50.10140. 1 hit.
3.80.10.10. 1 hit.
InterProiView protein in InterPro
IPR001611. Leu-rich_rpt.
IPR032675. LRR_dom_sf.
IPR000157. TIR_dom.
IPR027181. TLR9.
IPR035897. Toll_tir_struct_dom_sf.
PANTHERiPTHR24373:SF37. PTHR24373:SF37. 1 hit.
PfamiView protein in Pfam
PF13855. LRR_8. 1 hit.
PF01582. TIR. 1 hit.
SMARTiView protein in SMART
SM00255. TIR. 1 hit.
SUPFAMiSSF52058. SSF52058. 1 hit.
SSF52200. SSF52200. 1 hit.
PROSITEiView protein in PROSITE
PS50104. TIR. 1 hit.

Sequencei

Sequence statusi: Fragment.

Q80XA5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
SLIHLDLSQN KLHILRPQNL NYLPKSLTKL SFRDNHLSFF NWSSLAFLPN
60 70 80 90 100
LRDLDLAGNL LKALTNGTLP NGTLLQKLDV SSNSIVFVVP AFFALAVELK
110 120 130 140 150
EVNLSHNILK TVDRSWFGPI VMNLTVLDVS SNPLHCACGA PFVDLLLEVQ
160 170 180 190 200
TKVPGLANGV KCGSPRQLQG RSIFAQDLRL CLDDVLSRDC FGLSLLAVAV
210 220 230 240 250
GTVLPLLQHL CGWDVWYCFH LCLAWLPLLT RGRRSAQALP YDAFVVFDKA
260 270 280 290 300
QSAVADWVYN ELRVRLEERR GRRALRLCLE DRDWLPGQTL FENLWASIYG
310 320 330 340 350
SRKTLFVLAH TDKVSGLLRT SFLLAQQRLL EDRKDVVVLV ILRPDAHRSR
360 370 380
YVRLRQRLCR QSVLFWPHQP NGQGSFWAQL STALTRDN
Length:388
Mass (Da):43,970
Last modified:June 1, 2003 - v1
Checksum:i4E17AF770F65CF41
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1
Non-terminal residuei388Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY258139 mRNA. Translation: AAO93109.1.
UniGeneiRn.92495.

Similar proteinsi

Entry informationi

Entry nameiQ80XA5_RAT
AccessioniPrimary (citable) accession number: Q80XA5
Entry historyiIntegrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: January 31, 2018
This is version 84 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)