Q80X28 (Q80X28_MOUSE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Nrp1 protein EMBL AAH51447.1

Gene names

Name:

Nrp1 MGI 106206

Organism

Mus musculus (Mouse) EMBL AAH51447.1

Taxonomic identifier

10090 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus › Mus

Protein attributes

Sequence length	95 AA.
Sequence status	Fragment.
Protein existence	Evidence at transcript level

Ontologies

Gene Ontology (GO)
Biological_process	axon guidance Inferred from direct assay PubMed 15814794. Source: MGI axonal fasciculation Inferred from mutant phenotype PubMed 17428830. Source: MGI cell migration Inferred from mutant phenotype PubMed 15376331. Source: MGI cellular response to hepatocyte growth factor stimulus Inferred from electronic annotation. Source: Compara dendrite development Inferred from mutant phenotype PubMed 12852851. Source: MGI dichotomous subdivision of terminal units involved in salivary gland branching Inferred from mutant phenotype PubMed 17626059. Source: MGI endothelial cell chemotaxis Inferred from electronic annotation. Source: Compara heart development Inferred from genetic interaction PubMed 12852851. Source: MGI hepatocyte growth factor receptor signaling pathway Inferred from electronic annotation. Source: Compara negative regulation of axon extension involved in axon guidance Inferred from direct assay PubMed 9753685. Source: MGI organ morphogenesis Inferred from electronic annotation. Source: InterPro patterning of blood vessels Inferred from mutant phenotype PubMed 17428830. Source: MGI platelet-derived growth factor receptor signaling pathway Inferred from electronic annotation. Source: Compara positive regulation of peptidyl-tyrosine phosphorylation Inferred from electronic annotation. Source: Compara response to wounding Inferred from electronic annotation. Source: Compara sympathetic nervous system development Inferred from mutant phenotype PubMed 15814794. Source: MGI trigeminal nerve morphogenesis Inferred from mutant phenotype PubMed 15814794. Source: MGI vascular endothelial growth factor receptor signaling pathway Inferred from mutant phenotype PubMed 12852851. Source: MGI
Cellular_component	cell surface Inferred from electronic annotation. Source: Compara cytosol Inferred from electronic annotation. Source: Compara growth cone Inferred from electronic annotation. Source: Compara neurofilament Inferred from direct assay PubMed 15814794. Source: MGI neuronal cell body Inferred from electronic annotation. Source: Compara plasma membrane Inferred from electronic annotation. Source: Compara
Molecular_function	semaphorin receptor activity Inferred from genetic interaction PubMed 12591607. Source: MGI vascular endothelial growth factor-activated receptor activity Inferred from electronic annotation. Source: Compara
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	95	1	EMBL AAH51447.1

Sequences

	Sequence		Length	Mass (Da)
	Q80X28 [UniParc]. Last modified June 1, 2003. Version 1. Checksum: F61167BD4910EADB	FASTA	95	10,748
	10 20 30 40 50 60 MERGLPLLCA TLALALALAG AFRSDKCGGT IKIENPGYLT SPGYPHSYHP SEKCEWLIQA 70 80 90 PEPYQRIMIN FNPHFDLEDR DCKYDYVEVI DGENE

References

[1]

"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M. , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J. Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: C3H/He EMBL AAH51447.1. Tissue: Osteoblast EMBL AAH51447.1.

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Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BC051447 mRNA. Translation: AAH51447.1.
IPI	IPI00123996.
UniGene	Mm.271745.
3D structure databases
HSSP	HSSP built from PDB template 1NZI based on UniProtKB Q9UCV4.
ProteinModelPortal	Q80X28.
ModBase	Search...
Protein-protein interaction databases
STRING	10090.ENSMUSP00000026917. Q80X28.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Organism-specific databases
MGI	MGI:106206. Nrp1.
Phylogenomic databases
InParanoid	Q80X28.
Gene expression databases
ArrayExpress	Q80X28.
Bgee	Q80X28.
Genevestigator	Q80X28.
Family and domain databases
Gene3D	2.60.120.290. 1 hit.
InterPro	IPR000859. CUB_dom. IPR027146. NRP1. [Graphical view]
PANTHER	PTHR10127:SF84. PTHR10127:SF84. 1 hit.
Pfam	PF00431. CUB. 1 hit. [Graphical view]
SMART	SM00042. CUB. 1 hit. [Graphical view]
SUPFAM	SSF49854. CUB. 1 hit.
PROSITE	PS01180. CUB. 1 hit. [Graphical view]
ProtoNet	Search...
Other
ChiTaRS	NRP1. mouse.
SOURCE	Search...

Entry information

Entry name

Q80X28_MOUSE

Accession

Primary (citable) accession number: Q80X28

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 2003
Last sequence update:	June 1, 2003
Last modified:	May 1, 2013
This is version 53 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)