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Q80WM6 (Q80WM6_RAT) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 87. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:Rnasel RGD 727933
OrganismRattus norvegicus (Rat) EMBL AAP22025.1
Taxonomic identifier10116 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Protein attributes

Sequence length738 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Contains 8 ANK repeats. RuleBase RU003321

Sequences

Sequence LengthMass (Da)Tools
Q80WM6 [UniParc].

Last modified June 1, 2003. Version 1.
Checksum: 2A288A114C5FE633

FASTA73883,210
        10         20         30         40         50         60 
METTDHSTPQ CGSASAGGQK TVGKDDYLLI EAVNKGDADR VQQLLEQGAD ANVCEESGGW 

        70         80         90        100        110        120 
TPLHNAVQSG RVDIVNLLLR YGADPHRRKK NGATPFIVAG ICGDVSLLQI FLSRGANINE 

       130        140        150        160        170        180 
RDMYGFTAFM EAAEYGNVEA LKFLFAEGAD VNLRRETTED RRRLKQGGAT ALMSAAENGH 

       190        200        210        220        230        240 
PEVVRILLDE MKAEADARDN MGRNALIRSL LNRDCENVEI HVEEITSVLI QYGADINVRG 

       250        260        270        280        290        300 
EGEKTPLISA VKRKHTGLVQ MLLSQEGIKV NDRDSEGKTA LQIAVELKLK EIVRLLLEKG 

       310        320        330        340        350        360 
ADTKCGDLVW IAKRNYDHGL VKLLLSYEAN HDTNPPAKDW LPHSARWGEA LERLHSVSRP 

       370        380        390        400        410        420 
MTGKLKIFMN DDYKIASTSE GGIYLGIYDN REVAVKVFCE NSSRGRKEVS CLRDCGDHSN 

       430        440        450        460        470        480 
LLTFYGSEEH KGSLYVCVSL CESTLEKFLN VPREEPMEKG EDKFALSVLL SIFKGVQKLH 

       490        500        510        520        530        540 
MHGYSHQNLQ PPNILIDSEK AVRLADFDES IQWMRESQTV QRDLEDLGRL VLYVVNKGEI 

       550        560        570        580        590        600 
PFETLKGQND EELLTIAPNE ETKDLVHCLF SPGENVKNCL MDLLGHPFFW TWENRYRTLR 

       610        620        630        640        650        660 
DVGNESDIKV RNNKSKLLKL LQPQTHAPSR SFDRWTSKID KRVMSDMNGF YKSRKGYRDT 

       670        680        690        700        710        720 
VGDLLKFIRN IGEHINEEKN RQMKEILGDP SRYFQETFPD LVIYIYKKLK ETEFRKHFPQ 

       730 
PPPSLSVPEA AGPGGVQS 

« Hide

References

[1]"Molecular cloning of the rat RNaseL gene."
Hummer B.T., Hassel B.A.
Submitted (MAR-2003) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AY262823 mRNA. Translation: AAP22025.1.
RefSeqNP_872614.1. NM_182673.2.
UniGeneRn.107928.
Rn.228575.

3D structure databases

ProteinModelPortalQ80WM6.
SMRQ80WM6. Positions 24-309.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING10116.ENSRNOP00000032975.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID359726.
KEGGrno:359726.
UCSCRGD:727933. rat.

Organism-specific databases

CTD6041.
RGD727933. Rnasel.

Phylogenomic databases

eggNOGCOG0666.
HOGENOMHOG000276879.
HOVERGENHBG012673.
InParanoidQ80WM6.
KOK01165.
PhylomeDBQ80WM6.

Gene expression databases

GenevestigatorQ80WM6.

Family and domain databases

Gene3D1.25.40.20. 1 hit.
InterProIPR002110. Ankyrin_rpt.
IPR020683. Ankyrin_rpt-contain_dom.
IPR010513. KEN_dom.
IPR011009. Kinase-like_dom.
IPR000719. Prot_kinase_dom.
IPR006567. PUG-dom.
[Graphical view]
PfamPF12796. Ank_2. 3 hits.
PF00069. Pkinase. 1 hit.
PF06479. Ribonuc_2-5A. 1 hit.
[Graphical view]
PRINTSPR01415. ANKYRIN.
SMARTSM00248. ANK. 8 hits.
SM00580. PUG. 1 hit.
[Graphical view]
SUPFAMSSF48403. SSF48403. 1 hit.
SSF56112. SSF56112. 1 hit.
PROSITEPS50297. ANK_REP_REGION. 1 hit.
PS50088. ANK_REPEAT. 5 hits.
PS51392. KEN. 1 hit.
PS50011. PROTEIN_KINASE_DOM. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio672697.

Entry information

Entry nameQ80WM6_RAT
AccessionPrimary (citable) accession number: Q80WM6
Entry history
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: July 9, 2014
This is version 87 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)