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Protein

LHFPL tetraspan subfamily member 1 protein

Gene

Lhfpl1

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
LHFPL tetraspan subfamily member 1 proteinImported
Alternative name(s):
Lipoma HMGIC fusion partner-like 1 proteinBy similarity
Gene namesi
Name:Lhfpl1Imported
Synonyms:Lhfp
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome X

Organism-specific databases

RGDi727927 Lhfpl1

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei86 – 106HelicalSequence analysisAdd BLAST21
Transmembranei122 – 142HelicalSequence analysisAdd BLAST21
Transmembranei165 – 185HelicalSequence analysisAdd BLAST21

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 23Sequence analysisAdd BLAST23
ChainiPRO_000024476224 – 220LHFPL tetraspan subfamily member 1 proteinAdd BLAST197

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Glycosylationi153N-linked (GlcNAc...) asparagineSequence analysis1

Keywords - PTMi

Glycoprotein

Proteomic databases

PaxDbiQ80WE5
PRIDEiQ80WE5

Expressioni

Gene expression databases

BgeeiENSRNOG00000027601

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000037132

Family & Domainsi

Sequence similaritiesi

Belongs to the LHFP family.Curated

Keywords - Domaini

Signal, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG4026 Eukaryota
ENOG410XSUB LUCA
GeneTreeiENSGT00550000074479
HOGENOMiHOG000007007
HOVERGENiHBG080585
InParanoidiQ80WE5
OMAiKPVMLVE
OrthoDBiEOG091G10EV
PhylomeDBiQ80WE5
TreeFamiTF321143

Family and domain databases

InterProiView protein in InterPro
IPR019372 LHFPL
PANTHERiPTHR12489 PTHR12489, 1 hit
PfamiView protein in Pfam
PF10242 L_HMGIC_fpl, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q80WE5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRSSLTLVGT FWAFLSLVTA VASSTSYFLP YWLFGSQLGK PVSFSTFRRC
60 70 80 90 100
NYPVRGDGHN LIMVEECGRY ASFAAIPSLA WQMCTVVTGA GCALLLLVAL
110 120 130 140 150
AAVLGCCMEE LISRMMGRCM GAAQFVGGLL ISSGCALYPL GWNSPEVMQT
160 170 180 190 200
CGNVSNQFQL GTCRLGWAYY CAGGGAAAAM LICTWLSCFA GRNPKPVMLV
210 220
ENIMRNTNSY AMELDHCLKP
Length:220
Mass (Da):23,746
Last modified:June 1, 2003 - v1
Checksum:i674AA4BA6A3CDADD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY253667 mRNA Translation: AAP14356.1
RefSeqiNP_851599.1, NM_181085.2
XP_017457446.1, XM_017601957.1
UniGeneiRn.92478

Genome annotation databases

EnsembliENSRNOT00000030400; ENSRNOP00000037132; ENSRNOG00000027601
GeneIDi300286
KEGGirno:300286

Similar proteinsi

Entry informationi

Entry nameiLHPL1_RAT
AccessioniPrimary (citable) accession number: Q80WE5
Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 27, 2006
Last sequence update: June 1, 2003
Last modified: May 23, 2018
This is version 65 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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