Unreviewed, UniProtKB/TrEMBL Q80W55 (Q80W55_RAT)

Names and origin

Protein names

Submitted name:
    Putative secreted frizzled related protein EMBL CAD90761.1

Gene names

Name:	Sfrp2 RGD 735163
Synonyms:	sfrp2 EMBL CAD90761.1

Organism

Rattus norvegicus (Rat) EMBL CAD90761.1

Taxonomic identifier

10116 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length	77 AA.
Sequence status	Fragment.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at transcript level.

General annotation (Comments)

Sequence similarities

Contains 1 NTR domain. Spearmint SPM001134

Ontologies

Gene Ontology (GO)
Biological process	cellular response to extracellular stimulus Inferred from electronic annotation. Source: Compara somitogenesis Inferred from electronic annotation. Source: Compara
Molecular function	protein binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL CAD90761.1

Sequences

	Sequence		Length	Mass (Da)
	Q80W55-1 [UniParc]. Last modified June 1, 2003. Version 1. Checksum: DC1172EC11101225	FASTA	77	8,989
	10 20 30 40 50 60 KTIYKLNGVS DRDLKKSVLW LKDSLQCTCE EMNDINAPYL VMGQKQGGEL VITSVKRWQK 70 GQREFKRISR SIRKLQC

References

[1]	"Expression of secreted frizzled related protein 2 during apoptosis in the Canine retina." Lin C.T., Cocks J., Pierce- Kelling S., Squire M. Submitted (MAY-2003) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: Sprague Dawley EMBL CAD90761.1. Tissue: Retina EMBL CAD90761.1.
[2]	Sargan D.R. Submitted (MAY-2003) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: Sprague Dawley EMBL CAD90761.1. Tissue: Retina EMBL CAD90761.1.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AJ560715 mRNA. Translation: CAD90761.1.
IPI	IPI00204804.
UniGene	Rn.102416
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	Q80W55.
Genome annotation databases
Ensembl	ENSRNOT00000012658; ENSRNOP00000012659; ENSRNOG00000009465; Rattus norvegicus. [Genome view]
Phylogenomic databases
HOVERGEN	Q80W55.
Gene expression databases
ArrayExpress	Q80W55.
Genevestigator	Q80W55.
Family and domain databases
InterPro	IPR015526. Frizzled_related. IPR001134. Netrin_domain. IPR018933. Netrin_module_non-TIMP. IPR008993. TIMP-like_OB-fold. [Graphical view]
PANTHER	PTHR11309. Fz_related. 1 hit.
Pfam	PF01759. NTR. 1 hit. [Graphical view]
PROSITE	PS50189. NTR. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q80W55_RAT

Accession

Primary (citable) accession number: Q80W55

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 2003
Last sequence update:	June 1, 2003
Last modified:	November 3, 2009
This is version 34 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)