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Q80VP2

- SPAT7_MOUSE

UniProt

Q80VP2 - SPAT7_MOUSE

Protein

Spermatogenesis-associated protein 7 homolog

Gene

Spata7

Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 73 (01 Oct 2014)
      Sequence version 1 (01 Jun 2003)
      Previous versions | rss
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    Functioni

    May be involved in retinal function.

    GO - Biological processi

    1. response to stimulus Source: UniProtKB-KW
    2. visual perception Source: UniProtKB-KW

    Keywords - Biological processi

    Sensory transduction, Vision

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Spermatogenesis-associated protein 7 homolog
    Gene namesi
    Name:Spata7
    OrganismiMus musculus (Mouse)
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
    ProteomesiUP000000589: Chromosome 12

    Organism-specific databases

    MGIiMGI:2144877. Spata7.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 582582Spermatogenesis-associated protein 7 homologPRO_0000072105Add
    BLAST

    Proteomic databases

    PRIDEiQ80VP2.

    PTM databases

    PhosphoSiteiQ80VP2.

    Expressioni

    Tissue specificityi

    Expressed in the mature retina.1 Publication

    Gene expression databases

    BgeeiQ80VP2.
    CleanExiMM_SPATA7.
    GenevestigatoriQ80VP2.

    Interactioni

    Protein-protein interaction databases

    STRINGi10090.ENSMUSP00000045827.

    Structurei

    3D structure databases

    ProteinModelPortaliQ80VP2.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiNOG78294.
    GeneTreeiENSGT00390000014113.
    HOGENOMiHOG000132972.
    HOVERGENiHBG055067.
    InParanoidiQ80VP2.
    OMAiIKYADQQ.
    OrthoDBiEOG7NKKP7.
    PhylomeDBiQ80VP2.
    TreeFamiTF330591.

    Family and domain databases

    InterProiIPR029357. SPATA7.
    [Graphical view]
    PfamiPF15244. HSD3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q80VP2-1 [UniParc]FASTAAdd to Basket

    « Hide

    MDGSRRVRAT SVLPRYSPPC LFTGHLSTKS NAFCTDSSSL RLSTLQLVKN    50
    HMAIHYNKIL SAKAAVDCSI PVSVNTSIKY ADQQRREKLR KELARCEKEF 100
    KLSKSAMQTN SKMNSKFFVN SLQKPSGEPQ DQDVFIEEMT RYPSFSKSLI 150
    PSSEGLHLSL PESSKMLMSG TQKHASTSPS RHSGCGHGCD RRPRSAHQFQ 200
    VALAKTPSGD LLEKHSDLFS NKQSPFTPRT LKTEAKSFLS QYRYYTPAKR 250
    RKDFSDQRME AETQTELSSF NSELGTAEKT SSKDSEVNIN QVPNYTRNGA 300
    EDKIAPLPSQ GQNLAWDSIQ DGILQQSSER ASCKLSTEFS PDSKIYSDEE 350
    ELLYLSFMEN VTDEILKLGL FSNRFLERLF ERHIKKNKHH LEEGKMRYLL 400
    HGLKVDLGCI SEEDPAKQKH FRMLNQLHFQ KALISRENEF VSDEETVSHH 450
    ERQQYQEALD MLSAVPKDEN KMFSLPGEFL IPAHKVKHSE GVIIQQVNDE 500
    TDNEASPWNE NNPSVSDSVI DQETSVDVIE GDSDFERAET SRELCCLSTS 550
    LSPSGPFPSI NGGSNHGKEL STLRIMGMSI ED 582
    Length:582
    Mass (Da):65,655
    Last modified:June 1, 2003 - v1
    Checksum:i414A6A684A421DF5
    GO

    Sequence cautioni

    The sequence BAC36832.1 differs from that shown. Reason: Erroneous initiation.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK077500 mRNA. Translation: BAC36832.1. Different initiation.
    BC046960 mRNA. Translation: AAH46960.1.
    CCDSiCCDS26097.1.
    RefSeqiNP_849245.2. NM_178914.4.
    UniGeneiMm.210053.

    Genome annotation databases

    EnsembliENSMUST00000048402; ENSMUSP00000045827; ENSMUSG00000021007.
    GeneIDi104871.
    KEGGimmu:104871.
    UCSCiuc007ora.1. mouse.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK077500 mRNA. Translation: BAC36832.1 . Different initiation.
    BC046960 mRNA. Translation: AAH46960.1 .
    CCDSi CCDS26097.1.
    RefSeqi NP_849245.2. NM_178914.4.
    UniGenei Mm.210053.

    3D structure databases

    ProteinModelPortali Q80VP2.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 10090.ENSMUSP00000045827.

    PTM databases

    PhosphoSitei Q80VP2.

    Proteomic databases

    PRIDEi Q80VP2.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSMUST00000048402 ; ENSMUSP00000045827 ; ENSMUSG00000021007 .
    GeneIDi 104871.
    KEGGi mmu:104871.
    UCSCi uc007ora.1. mouse.

    Organism-specific databases

    CTDi 55812.
    MGIi MGI:2144877. Spata7.

    Phylogenomic databases

    eggNOGi NOG78294.
    GeneTreei ENSGT00390000014113.
    HOGENOMi HOG000132972.
    HOVERGENi HBG055067.
    InParanoidi Q80VP2.
    OMAi IKYADQQ.
    OrthoDBi EOG7NKKP7.
    PhylomeDBi Q80VP2.
    TreeFami TF330591.

    Miscellaneous databases

    NextBioi 357336.
    PROi Q80VP2.
    SOURCEi Search...

    Gene expression databases

    Bgeei Q80VP2.
    CleanExi MM_SPATA7.
    Genevestigatori Q80VP2.

    Family and domain databases

    InterProi IPR029357. SPATA7.
    [Graphical view ]
    Pfami PF15244. HSD3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The transcriptional landscape of the mammalian genome."
      Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
      , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
      Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: C57BL/6J.
      Tissue: Embryo.
    2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: C57BL/6.
      Tissue: Olfactory epithelium.
    3. Cited for: TISSUE SPECIFICITY, POSSIBLE FUNCTION.

    Entry informationi

    Entry nameiSPAT7_MOUSE
    AccessioniPrimary (citable) accession number: Q80VP2
    Secondary accession number(s): Q8BK23
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: September 26, 2003
    Last sequence update: June 1, 2003
    Last modified: October 1, 2014
    This is version 73 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. MGD cross-references
      Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot

    External Data

    Dasty 3