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Q80VP2 (SPAT7_MOUSE) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 70. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Spermatogenesis-associated protein 7 homolog
Gene names
Name:Spata7
OrganismMus musculus (Mouse) [Reference proteome]
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Protein attributes

Sequence length582 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Function

May be involved in retinal function. Ref.3

Tissue specificity

Expressed in the mature retina. Ref.3

Sequence caution

The sequence BAC36832.1 differs from that shown. Reason: Erroneous initiation.

Ontologies

Keywords
   Biological processSensory transduction
Vision
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processresponse to stimulus

Inferred from electronic annotation. Source: UniProtKB-KW

visual perception

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 582582Spermatogenesis-associated protein 7 homolog
PRO_0000072105

Sequences

Sequence LengthMass (Da)Tools
Q80VP2 [UniParc].

Last modified June 1, 2003. Version 1.
Checksum: 414A6A684A421DF5

FASTA58265,655
        10         20         30         40         50         60 
MDGSRRVRAT SVLPRYSPPC LFTGHLSTKS NAFCTDSSSL RLSTLQLVKN HMAIHYNKIL 

        70         80         90        100        110        120 
SAKAAVDCSI PVSVNTSIKY ADQQRREKLR KELARCEKEF KLSKSAMQTN SKMNSKFFVN 

       130        140        150        160        170        180 
SLQKPSGEPQ DQDVFIEEMT RYPSFSKSLI PSSEGLHLSL PESSKMLMSG TQKHASTSPS 

       190        200        210        220        230        240 
RHSGCGHGCD RRPRSAHQFQ VALAKTPSGD LLEKHSDLFS NKQSPFTPRT LKTEAKSFLS 

       250        260        270        280        290        300 
QYRYYTPAKR RKDFSDQRME AETQTELSSF NSELGTAEKT SSKDSEVNIN QVPNYTRNGA 

       310        320        330        340        350        360 
EDKIAPLPSQ GQNLAWDSIQ DGILQQSSER ASCKLSTEFS PDSKIYSDEE ELLYLSFMEN 

       370        380        390        400        410        420 
VTDEILKLGL FSNRFLERLF ERHIKKNKHH LEEGKMRYLL HGLKVDLGCI SEEDPAKQKH 

       430        440        450        460        470        480 
FRMLNQLHFQ KALISRENEF VSDEETVSHH ERQQYQEALD MLSAVPKDEN KMFSLPGEFL 

       490        500        510        520        530        540 
IPAHKVKHSE GVIIQQVNDE TDNEASPWNE NNPSVSDSVI DQETSVDVIE GDSDFERAET 

       550        560        570        580 
SRELCCLSTS LSPSGPFPSI NGGSNHGKEL STLRIMGMSI ED 

« Hide

References

« Hide 'large scale' references
[1]"The transcriptional landscape of the mammalian genome."
Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J. expand/collapse author list , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: C57BL/6J.
Tissue: Embryo.
[2]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: C57BL/6.
Tissue: Olfactory epithelium.
[3]"Mutations in SPATA7 cause Leber congenital amaurosis and juvenile retinitis pigmentosa."
Wang H., den Hollander A.I., Moayedi Y., Abulimiti A., Li Y., Collin R.W.J., Hoyng C.B., Lopez I., Bray M., Lewis R.A., Lupski J.R., Mardon G., Koenekoop R.K., Chen R.
Am. J. Hum. Genet. 84:380-387(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: TISSUE SPECIFICITY, POSSIBLE FUNCTION.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AK077500 mRNA. Translation: BAC36832.1. Different initiation.
BC046960 mRNA. Translation: AAH46960.1.
RefSeqNP_849245.2. NM_178914.4.
UniGeneMm.210053.

3D structure databases

ProteinModelPortalQ80VP2.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING10090.ENSMUSP00000045827.

PTM databases

PhosphoSiteQ80VP2.

Proteomic databases

PRIDEQ80VP2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSMUST00000048402; ENSMUSP00000045827; ENSMUSG00000021007.
GeneID104871.
KEGGmmu:104871.
UCSCuc007ora.1. mouse.

Organism-specific databases

CTD55812.
MGIMGI:2144877. Spata7.

Phylogenomic databases

eggNOGNOG78294.
GeneTreeENSGT00390000014113.
HOGENOMHOG000132972.
HOVERGENHBG055067.
InParanoidQ80VP2.
OMAIKYADQQ.
OrthoDBEOG7NKKP7.
PhylomeDBQ80VP2.
TreeFamTF330591.

Gene expression databases

BgeeQ80VP2.
CleanExMM_SPATA7.
GenevestigatorQ80VP2.

Family and domain databases

ProtoNetSearch...

Other

NextBio357336.
PROQ80VP2.
SOURCESearch...

Entry information

Entry nameSPAT7_MOUSE
AccessionPrimary (citable) accession number: Q80VP2
Secondary accession number(s): Q8BK23
Entry history
Integrated into UniProtKB/Swiss-Prot: September 26, 2003
Last sequence update: June 1, 2003
Last modified: April 16, 2014
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Relevant documents

MGD cross-references

Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot