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Q80SV1 (LHPL1_MOUSE) Reviewed, UniProtKB/Swiss-Prot

Last modified July 9, 2014. Version 71. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Lipoma HMGIC fusion partner-like 1 protein
Gene names
Name:Lhfpl1
OrganismMus musculus (Mouse) [Reference proteome]
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Protein attributes

Sequence length220 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at transcript level

General annotation (Comments)

Subcellular location

Membrane; Multi-pass membrane protein Potential.

Sequence similarities

Belongs to the LHFP family.

Ontologies

Keywords
   Cellular componentMembrane
   DomainSignal
Transmembrane
Transmembrane helix
   PTMGlycoprotein
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2020 Potential
Chain21 – 220200Lipoma HMGIC fusion partner-like 1 protein
PRO_0000244761

Regions

Transmembrane86 – 10621Helical; Potential
Transmembrane122 – 14221Helical; Potential
Transmembrane165 – 18521Helical; Potential

Amino acid modifications

Glycosylation1531N-linked (GlcNAc...) Potential

Sequences

Sequence LengthMass (Da)Tools
Q80SV1 [UniParc].

Last modified June 1, 2003. Version 1.
Checksum: ACFFF29D253E6C9B

FASTA22023,787
        10         20         30         40         50         60 
MRNSLTMVGT FWAFLSLVTA VASSTSYFLP YWLFGSQLGK PVSFSTFRRC NYPVRGDGHN 

        70         80         90        100        110        120 
LIMVEECGRY ASFTAIPSLA WQMCTVVTGA GCALLLLVAL AAVLGCCMEE LISRMMGRCM 

       130        140        150        160        170        180 
GAAQFVGGLL ISAGCALYPL GWNSPEVMQT CGNVSNQFQL GTCRLGWAYY CAGGGAAAAM 

       190        200        210        220 
LICTWLSCFA GRNPKPVMLV ENIMRNTNSY ALELDHCLKP 

« Hide

References

« Hide 'large scale' references
[1]Huang C.Q., Wu S.L., Liu S.
Submitted (MAR-2003) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [MRNA].
[2]"The transcriptional landscape of the mammalian genome."
Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J. expand/collapse author list , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: C57BL/6J.
Tissue: Kidney.
[3]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Olfactory epithelium.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AY253666 mRNA. Translation: AAP14355.1.
AK142526 mRNA. Translation: BAE25096.1.
BC051434 mRNA. Translation: AAH51434.1.
CCDSCCDS30458.1.
RefSeqNP_848135.1. NM_178358.3.
XP_006528863.1. XM_006528800.1.
XP_006528864.1. XM_006528801.1.
XP_006528865.1. XM_006528802.1.
UniGeneMm.135547.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING10090.ENSMUSP00000044054.

PTM databases

PhosphoSiteQ80SV1.

Proteomic databases

PRIDEQ80SV1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSMUST00000040084; ENSMUSP00000044054; ENSMUSG00000041700.
GeneID237091.
KEGGmmu:237091.
UCSCuc009umz.1. mouse.

Organism-specific databases

CTD340596.
MGIMGI:1891214. Lhfpl1.

Phylogenomic databases

eggNOGNOG310245.
GeneTreeENSGT00550000074479.
HOGENOMHOG000007007.
HOVERGENHBG080585.
InParanoidQ80SV1.
OMATCQLGWA.
OrthoDBEOG7TF7BG.
PhylomeDBQ80SV1.
TreeFamTF321143.

Gene expression databases

BgeeQ80SV1.
CleanExMM_LHFPL1.
GenevestigatorQ80SV1.

Family and domain databases

InterProIPR019372. Lipome_HGMIC_fus_partner-like.
[Graphical view]
PfamPF10242. L_HGMIC_fpl. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio383221.
PROQ80SV1.
SOURCESearch...

Entry information

Entry nameLHPL1_MOUSE
AccessionPrimary (citable) accession number: Q80SV1
Entry history
Integrated into UniProtKB/Swiss-Prot: June 27, 2006
Last sequence update: June 1, 2003
Last modified: July 9, 2014
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

MGD cross-references

Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot