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Q80SV1

- LHPL1_MOUSE

UniProt

Q80SV1 - LHPL1_MOUSE

Protein

Lipoma HMGIC fusion partner-like 1 protein

Gene

Lhfpl1

Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 72 (01 Oct 2014)
      Sequence version 1 (01 Jun 2003)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Lipoma HMGIC fusion partner-like 1 protein
    Gene namesi
    Name:Lhfpl1
    OrganismiMus musculus (Mouse)
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
    ProteomesiUP000000589: Chromosome X

    Organism-specific databases

    MGIiMGI:1891214. Lhfpl1.

    Subcellular locationi

    GO - Cellular componenti

    1. integral component of membrane Source: UniProtKB-KW

    Keywords - Cellular componenti

    Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2020Sequence AnalysisAdd
    BLAST
    Chaini21 – 220200Lipoma HMGIC fusion partner-like 1 proteinPRO_0000244761Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Glycosylationi153 – 1531N-linked (GlcNAc...)Sequence Analysis

    Keywords - PTMi

    Glycoprotein

    Proteomic databases

    PRIDEiQ80SV1.

    PTM databases

    PhosphoSiteiQ80SV1.

    Expressioni

    Gene expression databases

    BgeeiQ80SV1.
    CleanExiMM_LHFPL1.
    GenevestigatoriQ80SV1.

    Interactioni

    Protein-protein interaction databases

    STRINGi10090.ENSMUSP00000044054.

    Structurei

    Transmembrane

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transmembranei86 – 10621HelicalSequence AnalysisAdd
    BLAST
    Transmembranei122 – 14221HelicalSequence AnalysisAdd
    BLAST
    Transmembranei165 – 18521HelicalSequence AnalysisAdd
    BLAST

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the LHFP family.Curated

    Keywords - Domaini

    Signal, Transmembrane, Transmembrane helix

    Phylogenomic databases

    eggNOGiNOG310245.
    GeneTreeiENSGT00550000074479.
    HOGENOMiHOG000007007.
    HOVERGENiHBG080585.
    InParanoidiQ80SV1.
    OMAiTCQLGWA.
    OrthoDBiEOG7TF7BG.
    PhylomeDBiQ80SV1.
    TreeFamiTF321143.

    Family and domain databases

    InterProiIPR019372. Lipome_HGMIC_fus_partner-like.
    [Graphical view]
    PfamiPF10242. L_HGMIC_fpl. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q80SV1-1 [UniParc]FASTAAdd to Basket

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    MRNSLTMVGT FWAFLSLVTA VASSTSYFLP YWLFGSQLGK PVSFSTFRRC    50
    NYPVRGDGHN LIMVEECGRY ASFTAIPSLA WQMCTVVTGA GCALLLLVAL 100
    AAVLGCCMEE LISRMMGRCM GAAQFVGGLL ISAGCALYPL GWNSPEVMQT 150
    CGNVSNQFQL GTCRLGWAYY CAGGGAAAAM LICTWLSCFA GRNPKPVMLV 200
    ENIMRNTNSY ALELDHCLKP 220
    Length:220
    Mass (Da):23,787
    Last modified:June 1, 2003 - v1
    Checksum:iACFFF29D253E6C9B
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AY253666 mRNA. Translation: AAP14355.1.
    AK142526 mRNA. Translation: BAE25096.1.
    BC051434 mRNA. Translation: AAH51434.1.
    CCDSiCCDS30458.1.
    RefSeqiNP_848135.1. NM_178358.3.
    XP_006528863.1. XM_006528800.1.
    XP_006528864.1. XM_006528801.1.
    XP_006528865.1. XM_006528802.1.
    UniGeneiMm.135547.

    Genome annotation databases

    EnsembliENSMUST00000040084; ENSMUSP00000044054; ENSMUSG00000041700.
    GeneIDi237091.
    KEGGimmu:237091.
    UCSCiuc009umz.1. mouse.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AY253666 mRNA. Translation: AAP14355.1 .
    AK142526 mRNA. Translation: BAE25096.1 .
    BC051434 mRNA. Translation: AAH51434.1 .
    CCDSi CCDS30458.1.
    RefSeqi NP_848135.1. NM_178358.3.
    XP_006528863.1. XM_006528800.1.
    XP_006528864.1. XM_006528801.1.
    XP_006528865.1. XM_006528802.1.
    UniGenei Mm.135547.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 10090.ENSMUSP00000044054.

    PTM databases

    PhosphoSitei Q80SV1.

    Proteomic databases

    PRIDEi Q80SV1.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSMUST00000040084 ; ENSMUSP00000044054 ; ENSMUSG00000041700 .
    GeneIDi 237091.
    KEGGi mmu:237091.
    UCSCi uc009umz.1. mouse.

    Organism-specific databases

    CTDi 340596.
    MGIi MGI:1891214. Lhfpl1.

    Phylogenomic databases

    eggNOGi NOG310245.
    GeneTreei ENSGT00550000074479.
    HOGENOMi HOG000007007.
    HOVERGENi HBG080585.
    InParanoidi Q80SV1.
    OMAi TCQLGWA.
    OrthoDBi EOG7TF7BG.
    PhylomeDBi Q80SV1.
    TreeFami TF321143.

    Miscellaneous databases

    NextBioi 383221.
    PROi Q80SV1.
    SOURCEi Search...

    Gene expression databases

    Bgeei Q80SV1.
    CleanExi MM_LHFPL1.
    Genevestigatori Q80SV1.

    Family and domain databases

    InterProi IPR019372. Lipome_HGMIC_fus_partner-like.
    [Graphical view ]
    Pfami PF10242. L_HGMIC_fpl. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Huang C.Q., Wu S.L., Liu S.
      Submitted (MAR-2003) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    2. "The transcriptional landscape of the mammalian genome."
      Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
      , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
      Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: C57BL/6J.
      Tissue: Kidney.
    3. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: Olfactory epithelium.

    Entry informationi

    Entry nameiLHPL1_MOUSE
    AccessioniPrimary (citable) accession number: Q80SV1
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: June 27, 2006
    Last sequence update: June 1, 2003
    Last modified: October 1, 2014
    This is version 72 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. MGD cross-references
      Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3