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Protein
Submitted name:

Polyprotein

Gene
N/A
Organism
Murine norovirus 1
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.PROSITE-ProRule annotation

Catalytic activityi

Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1).SAAS annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi1420MagnesiumCombined sources1
Metal bindingi1524MagnesiumCombined sources1
Metal bindingi1525Magnesium; via carbonyl oxygenCombined sources1
Metal bindingi1569Magnesium; via carbonyl oxygenCombined sources1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionHydrolase, Nucleotidyltransferase, Protease, RNA-directed RNA polymeraseSAAS annotation, Thiol proteaseSAAS annotation, Transferase
Biological processViral RNA replicationSAAS annotation
LigandATP-bindingSAAS annotation, MagnesiumCombined sources, Metal-bindingCombined sources, Nucleotide-binding

Protein family/group databases

MEROPSiC37.003

Names & Taxonomyi

Protein namesi
Submitted name:
PolyproteinImported
OrganismiMurine norovirus 1Imported
Taxonomic identifieri223997 [NCBI]
Taxonomic lineageiVirusesssRNA virusesssRNA positive-strand viruses, no DNA stageCaliciviridaeNorovirus
Proteomesi
  • UP000109015 Componenti: Genome

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Disulfide bondi1383 ↔ 1484Combined sources
Disulfide bondi1482 ↔ 1484Combined sources

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2M4GNMR-A881-955[»]
2MCDNMR-A28-114[»]
2MCHNMR-A58-114[»]
3NAHX-ray2.75A/B/C1181-1686[»]
3NAIX-ray2.56A/B/C1181-1686[»]
3QIDX-ray2.50A/B/C1181-1686[»]
3SFGX-ray2.21A/B/C1181-1686[»]
3SFUX-ray2.50A/B/C1181-1686[»]
3UPFX-ray2.60A/B/C1174-1687[»]
3UQSX-ray2.00A/B/C1181-1687[»]
3UR0X-ray2.45A/B/C1181-1687[»]
4ASHX-ray1.58A/B995-1177[»]
4NRUX-ray2.30A/B/C/D/E/F1181-1687[»]
4O4RX-ray2.40A/B/C1181-1687[»]
4X2VX-ray2.30A/B/C/D995-1178[»]
E1174-1178[»]
4X2WX-ray2.70A/B997-1175[»]
4X2XX-ray2.47A998-1173[»]
4X2YX-ray2.42A/B998-1173[»]
ProteinModelPortaliQ80J95
SMRiQ80J95
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ80J95

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini476 – 641SF3 helicaseInterPro annotationAdd BLAST166
Domaini995 – 1172Peptidase C37InterPro annotationAdd BLAST178
Domaini1416 – 1537RdRp catalyticInterPro annotationAdd BLAST122

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili912 – 932Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Family and domain databases

InterProiView protein in InterPro
IPR000605 Helicase_SF3_ssDNA/RNA_vir
IPR014759 Helicase_SF3_ssRNA_vir
IPR001665 Norovirus_pept_C37
IPR027417 P-loop_NTPase
IPR009003 Peptidase_S1_PA
IPR001205 RNA-dir_pol_C
IPR007094 RNA-dir_pol_PSvirus
IPR013614 Viral_PP_Calicivir_N
PfamiView protein in Pfam
PF08405 Calici_PP_N, 1 hit
PF05416 Peptidase_C37, 1 hit
PF00680 RdRP_1, 1 hit
PF00910 RNA_helicase, 1 hit
PRINTSiPR00917 SRSVCYSPTASE
SUPFAMiSSF50494 SSF50494, 1 hit
SSF52540 SSF52540, 1 hit
PROSITEiView protein in PROSITE
PS51537 NV_3CL_PRO, 1 hit
PS50507 RDRP_SSRNA_POS, 1 hit
PS51218 SF3_HELICASE_2, 1 hit

Sequencei

Sequence statusi: Complete.

Q80J95-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRMATPSSAP SVRNTEKRKN KKASSKASVS FGAPSPLSSE SEDEINYMTP
60 70 80 90 100
PEQEAQPGAL AALHAEGPLA GLPVTRSDAR VLIFNEWEER KKSDPWLRLD
110 120 130 140 150
MSDKAIFRRY PHLRPKEDRP DAPSHAEDAM DAKEPVIGSI LEQDDHKFYH
160 170 180 190 200
YSVYIGGGLV MGVNNPSAAV CQATIDVEKL HLWWRPVWEP RXPLDSAELR
210 220 230 240 250
KCVGMTVPYV ATTVNCYQVC CWIVGIKDTW LKRAKISRDL PFYSPVQDWN
260 270 280 290 300
VDPQEPFIPS KLRMVSDGIL VALSAVIGRP IKNLLASVKP LNILNIVLSC
310 320 330 340 350
DWTFSGIVNA LILLAELFDI FWTPPDVTNW MISIFGEWQA EGPFDLALDV
360 370 380 390 400
VPTLLGGIGM AFGLTSETIG RKLASTNSAL KAAQEMGKFA IEVFKQIMAW
410 420 430 440 450
IWPSEDPVPA LLSNMEQAII KNECQLENQL TAMLRDRNAG AEFLRSLDEE
460 470 480 490 500
EQEVRKIAAK CGNSATTGTT NALLARISMA RAAFEKARAE QTSRVRPVVI
510 520 530 540 550
MVSGRPGIGK TCFCQNLAKR IAASLGDETS VGIIPRADVD HWDAYKGARV
560 570 580 590 600
VLWDDFGMDN VVKDALRLQM LADTCPVTLN CDRIENKGKM FDSQVIIITT
610 620 630 640 650
NQQTPVPLDY VNLEAVCRRI DFLVYAESPV VDDARARAPG DVNAVKAAMR
660 670 680 690 700
PDYSHINFIL APQGGFDRQG NTPYGKGVTK IIGATALCAR AVALVHERHD
710 720 730 740 750
DFGLQNKVYD FDAGKVTAFK AMAADAGIPW YKMAAIGCKA MGCTCVEEAM
760 770 780 790 800
HLLKDYEVAP CQVIYNGATY NVSCIKGAPM VEKVKEPELP KTLVNCVRRI
810 820 830 840 850
KEARLRCYCR MAADVITSIL QAAGTAFSIY HQIEKRSRPS FYWDXGYTYR
860 870 880 890 900
DGPGSFDIFE DDDDGWYHSE GKKGKNKKGR GRPGVFRTRG LTDEEYDEFK
910 920 930 940 950
KRRESRGGKY SIDDYLADRE REEELLERDE EEAIFGDGFG LKATRRSRKA
960 970 980 990 1000
ERAKLGLVSG GDIRARKPID WNVVGPSWAD DDRQVDYGEK INFEAPVSIW
1010 1020 1030 1040 1050
SRVVQFGTGW GFWVSGHVFI TAKHVAPPKG TEIFGRKPGD FTVTSSGDFL
1060 1070 1080 1090 1100
KYYFTSAVRP DIPAMVLENG CQEGVVASVL VKRASGEMLA LAVRMGSQAA
1110 1120 1130 1140 1150
IKIGSAVVHG QTGMLLTGSN AKAQDLGTIP GDCGCPYVYK KGNTWVVIGV
1160 1170 1180 1190 1200
HVAATRSGNT VIAATHGEPT LEALEFQGPP MLPRPSGTYA GLPIADYGDA
1210 1220 1230 1240 1250
PPLSTKTMFW RTSPEKLPPG AWEPAYLGSK DERVDGPSLQ QVMRDQLKPY
1260 1270 1280 1290 1300
SEPRGLLPPQ EILDAVCDAI ENRLENTLEP QKPWTFKKAC ESLDKNTSSG
1310 1320 1330 1340 1350
YPYHKQKSKD WTGSAFIGDL GDQATHANNM YEMGKSMRPI YTAALKDELV
1360 1370 1380 1390 1400
KPDKIYGKIK KRLLWGSDLG TMIRAARAFG PFCDALKETC IFNPIRVGMS
1410 1420 1430 1440 1450
MNEDGPFIFA RHANFRYHMD ADYTRWDSTQ QRAILKRAGD IMVRLSPEPD
1460 1470 1480 1490 1500
LARVVMDDLL APSLLDVGDY KIVVEEGLPS GCPCTTQLNS LAHWILTLCA
1510 1520 1530 1540 1550
MVEVTRVDPD IVMQESEFSF YGDDEVVSTN LELDMVKYTM ALRRYGLLPT
1560 1570 1580 1590 1600
RADKEEGPLE RRQTLQGISF LRRAIVGDQF GWYGRLDRAS IDRQLLWTKG
1610 1620 1630 1640 1650
PNHQNPFETL PGHAQRPSQL MALLGEAAMH GEKYYRTVAS RVSKEAAQSG
1660 1670 1680
IEMVVPRHRS VLRWVRFGTM DAETPQERSA VFVNEDE
Length:1,687
Mass (Da):187,473
Last modified:December 6, 2005 - v2
Checksum:iEA493276296FDB23
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY228235 Genomic RNA Translation: AAO63098.2

Similar proteinsi

Entry informationi

Entry nameiQ80J95_9CALI
AccessioniPrimary (citable) accession number: Q80J95
Entry historyiIntegrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: December 6, 2005
Last modified: April 25, 2018
This is version 98 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteomeImported

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