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Protein
Submitted name:

Heat shock 60kD protein 1 (Chaperonin)

Gene

hspd1

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

  • fin regeneration Source: ZFIN
  • protein refolding Source: InterPro
  • tissue regeneration Source: ZFIN
Complete GO annotation...

Keywords - Biological processi

Stress responseImported

Names & Taxonomyi

Protein namesi
Submitted name:
Heat shock 60kD protein 1 (Chaperonin)Imported
Submitted name:
Hspd1 proteinImported
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:hspd1Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Chromosome 9

Organism-specific databases

ZFINiZDB-GENE-021206-1. hspd1.

Subcellular locationi

GO - Cellular componenti

  • mitochondrial matrix Source: ZFIN
Complete GO annotation...

Expressioni

Gene expression databases

BgeeiENSDARG00000056160.

Interactioni

Protein-protein interaction databases

MINTiMINT-8283560.
STRINGi7955.ENSDARP00000073057.

Structurei

3D structure databases

SMRiQ803B0. Positions 27-550.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili364 – 39532Sequence analysisAdd
BLAST

Sequence similaritiesi

Belongs to the chaperonin (HSP60) family.UniRule annotation

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG0356. Eukaryota.
COG0459. LUCA.
GeneTreeiENSGT00390000005727.
HOGENOMiHOG000076290.
HOVERGENiHBG001982.
KOiK04077.
OMAiNQHRKPL.
OrthoDBiEOG091G04JM.
PhylomeDBiQ803B0.
TreeFamiTF300475.

Family and domain databases

Gene3Di1.10.560.10. 2 hits.
3.50.7.10. 1 hit.
HAMAPiMF_00600. CH60. 1 hit.
InterProiIPR018370. Chaperonin_Cpn60_CS.
IPR001844. Chaprnin_Cpn60.
IPR002423. Cpn60/TCP-1.
IPR027409. GroEL-like_apical_dom.
IPR027413. GROEL-like_equatorial.
[Graphical view]
PfamiPF00118. Cpn60_TCP1. 1 hit.
[Graphical view]
PRINTSiPR00298. CHAPERONIN60.
SUPFAMiSSF52029. SSF52029. 1 hit.
TIGRFAMsiTIGR02348. GroEL. 1 hit.
PROSITEiPS00296. CHAPERONINS_CPN60. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q803B0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLRLPSVMRQ MRPVCRALAP HLTRAYAKDV KFGADARALM LQGVDLLADA
60 70 80 90 100
VAVTMGPKGR TVIIEQSWGS PKVTKDGVTV AKSIDLKDRY KNIGAKLVQD
110 120 130 140 150
VANNTNEEAG DGTTTATVLA RAVAKEGFDT ISKGANPVEI RRGVMMAVEE
160 170 180 190 200
VISELKKNSK PVTTPEEIAQ VATISANGDT EVGNIISNAM KKVGRKGVIT
210 220 230 240 250
VKDGKTLHDE LEIIEGMKFD RGYISPYFIN TAKGQKCEFQ DAYVLLSEKK
260 270 280 290 300
ISSVQSIVPA LEIANQHRKP LVIVAEDVDG EALSTLVLNR LKVGLQVVAV
310 320 330 340 350
KAPGFGDNRK NQLQDMAVST GGTVFGDEAM GLALEDIQAH DFGKVGEVIV
360 370 380 390 400
TKDDTMLLKG RGDASAIEKR VNEIAEQLES TNSDYEKEKL NERLAKLSDG
410 420 430 440 450
VAVIKVGGTS DVEVNEKKDR VTDALNATRA AVEEGIVPGG GCALLRCIPA
460 470 480 490 500
LDNIKPANAD QKIGIDIIRR SLRIPAMTIA KNAGVEGSLV VEKILQSSTE
510 520 530 540 550
IGYDAMNGEY VNMVERGIID PTKVVRTALL DAAGVASLLS TAEAVVTEIP
560 570
KEEKEMPAGG MGGMGGMGGM GGMGF
Length:575
Mass (Da):61,196
Last modified:June 1, 2003 - v1
Checksum:iCA94CBE74AB6CC77
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX530407 Genomic DNA. No translation available.
BC044557 mRNA. Translation: AAH44557.1.
BC068415 mRNA. Translation: AAH68415.1.
RefSeqiNP_851847.1. NM_181330.3.
UniGeneiDr.75320.

Genome annotation databases

EnsembliENSDART00000078596; ENSDARP00000073057; ENSDARG00000056160.
ENSDART00000127938; ENSDARP00000107955; ENSDARG00000056160.
GeneIDi282676.
KEGGidre:282676.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX530407 Genomic DNA. No translation available.
BC044557 mRNA. Translation: AAH44557.1.
BC068415 mRNA. Translation: AAH68415.1.
RefSeqiNP_851847.1. NM_181330.3.
UniGeneiDr.75320.

3D structure databases

SMRiQ803B0. Positions 27-550.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

MINTiMINT-8283560.
STRINGi7955.ENSDARP00000073057.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSDART00000078596; ENSDARP00000073057; ENSDARG00000056160.
ENSDART00000127938; ENSDARP00000107955; ENSDARG00000056160.
GeneIDi282676.
KEGGidre:282676.

Organism-specific databases

CTDi3329.
ZFINiZDB-GENE-021206-1. hspd1.

Phylogenomic databases

eggNOGiKOG0356. Eukaryota.
COG0459. LUCA.
GeneTreeiENSGT00390000005727.
HOGENOMiHOG000076290.
HOVERGENiHBG001982.
KOiK04077.
OMAiNQHRKPL.
OrthoDBiEOG091G04JM.
PhylomeDBiQ803B0.
TreeFamiTF300475.

Gene expression databases

BgeeiENSDARG00000056160.

Family and domain databases

Gene3Di1.10.560.10. 2 hits.
3.50.7.10. 1 hit.
HAMAPiMF_00600. CH60. 1 hit.
InterProiIPR018370. Chaperonin_Cpn60_CS.
IPR001844. Chaprnin_Cpn60.
IPR002423. Cpn60/TCP-1.
IPR027409. GroEL-like_apical_dom.
IPR027413. GROEL-like_equatorial.
[Graphical view]
PfamiPF00118. Cpn60_TCP1. 1 hit.
[Graphical view]
PRINTSiPR00298. CHAPERONIN60.
SUPFAMiSSF52029. SSF52029. 1 hit.
TIGRFAMsiTIGR02348. GroEL. 1 hit.
PROSITEiPS00296. CHAPERONINS_CPN60. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ803B0_DANRE
AccessioniPrimary (citable) accession number: Q803B0
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: September 7, 2016
This is version 117 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.