Q800Z9 (Q800Z9_DANRE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Zinc finger transcription factor detour EMBL AAO43495.1

Gene names

Name:

gli1 EMBL AAO43495.1

Organism

Danio rerio (Zebrafish) (Brachydanio rerio) EMBL AAO43495.1

Taxonomic identifier

7955 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Ostariophysi › Cypriniformes › Cyprinidae › Danio

Protein attributes

Sequence length	1404 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Gene Ontology (GO)
Biological process	adenohypophysis morphogenesis Inferred from mutant phenotype. Source: ZFIN floor plate formation Inferred from mutant phenotype. Source: ZFIN regulation of neurogenesis Inferred from mutant phenotype. Source: ZFIN retinal ganglion cell axon guidance Inferred from mutant phenotype. Source: ZFIN ventral spinal cord interneuron specification Inferred from mutant phenotype. Source: ZFIN
Cellular component	Hedgehog signaling complex Inferred from direct assay. Source: ZFIN
Molecular function	nucleic acid binding Inferred from electronic annotation. Source: InterPro protein binding Inferred from physical interaction. Source: ZFIN zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q800Z9 [UniParc]. Last modified June 1, 2003. Version 1. Checksum: 08BAE9FE8385EC99	FASTA	1,404	152,833
	10 20 30 40 50 60 MPVDMQPHQG LYHYDNTSNQ PSRGLAPSVR SPYSSEASSV CVALSGGQSV NSREMYNPSM 70 80 90 100 110 120 APGACMEPYM RAPHAPPPHS MMGHRGMPPP EGMSGAPYCN QNMMTSHHNL PHNQHTSELM 130 140 150 160 170 180 ASGDASCFST PRSMLKLSKK RALSISPLSD ASVDLQTVIR TSPNSLVAFV NSRCGPNNPS 190 200 210 220 230 240 SYGHLSVGTM SPSLGFSSSI NYSRPQGNIY SHPVPSCIGA PARLPPHNPR LHTPAKHTHL 250 260 270 280 290 300 KTEPVLGSVM DSINIKGLED HSEGDVASPS STGTQDPLLG LLEGRDDLDK EEKPEPEAIY 310 320 330 340 350 360 ETNCHWESCS KEFDTQEQLV HHINNEHIHG EKKEFVCHWK DCSREQRPFK AQYMLVVHMR 370 380 390 400 410 420 RHTGEKPHKC TFEGCNKAYS RLENLKTHLR SHTGEKPYVC EHEGCNKAFS NASDRAKHQN 430 440 450 460 470 480 RTHSNEKPYI CKIPGCTKRY TDPSSLRKHV KTVHGPEAHI TKKHRGDTGP RPPGLTTAGQ 490 500 510 520 530 540 SSELLIEKEE RNREDCKLLA PDNTLKSQPS PGGQSSCSSE RSPLGSANNN DSGVEMNLNA 550 560 570 580 590 600 AGSLEDLTTQ EDSGNAGVSE SSATISSGGM CMSVQALKRL ENLKIDKLKQ IRRPTPPGRN 610 620 630 640 650 660 AGNKLPALSA TGEMMSMCAP SPLLSNRRVM ELSAPDMGGV TGMSCPPNDR RGSGTSSLSS 670 680 690 700 710 720 AYTVSRRSSM VSPYLSSRRS SDVSHCQSVM GGEVPGDPLS PQNSQRAGLC QNSGGLPGLP 730 740 750 760 770 780 SLTPAQQYSL KAKYAAATGG PPPTPLPNMD QAGTPARHVG FLRECQGQPL PPFLQQGGTR 790 800 810 820 830 840 RHSANAEYGT GVIYPHQAPG NNTRRASDPV RSAADPQGLP KVQRFNSLSN VSLMSRRNAL 850 860 870 880 890 900 QQCGSDAALS RHMYSPRPPS ITENVMMEAM GMDGNTEGRQ QGNMIPGGDR SYMGYQHNPH 910 920 930 940 950 960 QASQLSPGQE SLGCIDQVYQ SQMQGQYQRE ESCSTGVMGQ ADIANNLLQQ AEYGMSTCQL 970 980 990 1000 1010 1020 SPSGPHYPSQ GDGSGPWGQT NQLHSPGMQY QGAGMQGQHY TQQGIYDPTS NPNLQRVTVK 1030 1040 1050 1060 1070 1080 PEQFHPSMGG SSSCQNTKAL HQNRHNANMQ TYPLQGQGIM NRSSSASCDF HHSQMGTQPN 1090 1100 1110 1120 1130 1140 QGGSFQSGTG INLALAESRR SQTPMHQMKE MMVRNYVQSQ QALLWEQQQE QSVSEKPDGM 1150 1160 1170 1180 1190 1200 DMGQTQMMQH SPQHQQANQN LYPGNTYQGY PNQNLMSPQQ NRVPGSVKEQ MQSSCYGPDM 1210 1220 1230 1240 1250 1260 IPRPPQVRKS LSRQNSLSQQ AGGAYLGSPP HLSPVHSTAS PRRGVRLPPV QQQQQQQQQH 1270 1280 1290 1300 1310 1320 SENFNNNNNP MYYSGQMHMH HDLEKTPEGP CLAQQHLTSS DPTTKPTSIS YPDPAPMSNA 1330 1340 1350 1360 1370 1380 LEHLDLENAQ IDFTSIIDDQ EPSSYSPINA PIGHNQCSSQ TSSRLTTPQN SITLPSGLSN 1390 1400 MAIGDMSSML TSLAGENKYL NTLS

References

[1]	"Genetic analysis of zebrafish gli1 and gli2 reveals divergent requirements for gli genes in vertebrate development." Karlstrom R.O., Tyurina O.V., Kawakami A., Nishioka N., Talbot W.S., Sasaki H., Schier A.F. Development 130:1549-1564(2003) [PubMed: 12620981] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AY173030 mRNA. Translation: AAO43495.1.
IPI	IPI00513521.
RefSeq	NP_840081.1. NM_178296.2.
UniGene	Dr.88778.
3D structure databases
HSSP	HSSP built from PDB template 2GLI based on UniProtKB P08151.
ProteinModelPortal	Q800Z9.
SMR	Q800Z9. Positions 301-455.
ModBase	Search...
Protein-protein interaction databases
STRING	Q800Z9.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	352930.
KEGG	dre:352930.
Organism-specific databases
CTD	2735.
ZFIN	ZDB-GENE-030321-1. gli1.
Phylogenomic databases
eggNOG	fiNOG14490.
GeneTree	ENSGT00600000084058.
HOVERGEN	HBG005844.
InParanoid	Q800Z9.
OrthoDB	EOG4T1HKP.
Gene expression databases
ArrayExpress	Q800Z9.
Bgee	Q800Z9.
Family and domain databases
InterPro	IPR007087. Znf_C2H2. IPR015880. Znf_C2H2-like. IPR013087. Znf_C2H2/integrase_DNA-bd. [Graphical view]
Gene3D	G3DSA:3.30.160.60. Znf_C2H2/integrase_DNA-bd. 4 hits.
KO	K06230.
Pfam	PF00096. zf-C2H2. 4 hits. [Graphical view]
SMART	SM00355. ZnF_C2H2. 5 hits. [Graphical view]
PROSITE	PS00028. ZINC_FINGER_C2H2_1. 4 hits. PS50157. ZINC_FINGER_C2H2_2. 5 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q800Z9_DANRE

Accession

Primary (citable) accession number: Q800Z9

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 2003
Last sequence update:	June 1, 2003
Last modified:	November 16, 2011
This is version 56 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)